RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 NUMBLQ9Y6R0 609 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 A0A1W2PPL8 197 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 PRSS38A1L453 326 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 FAM90A27PA6NNH2 459 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 ZKSCAN1P17029 563 aaPredicted RBP3.63□□□□□ -1.83
SNX13-209ENST00000492626 CNGB1Q14028 1251 aaPredicted RBP3.63□□□□□ -1.83
SNX13-209ENST00000492626 SNX17Q15036 470 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 ANO6Q4KMQ2 910 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 INO80DQ53TQ3 878 aaPredicted RBP3.63□□□□□ -1.83
SNX13-209ENST00000492626 CATSPEREQ5SY80 951 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 DPP9Q86TI2 863 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 CCDC33Q8N5R6 958 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 MARCH10Q8NA82 808 aaPredicted RBP3.63□□□□□ -1.83
SNX13-209ENST00000492626 GAB3Q8WWW8 586 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 ASB15Q8WXK1 588 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 MTA3Q9BTC8 594 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 PAGR1Q9BTK6 254 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 UCKL1Q9NWZ5 548 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 POLHQ9Y253 713 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 NR2E3Q9Y5X4 410 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 LCHNA4D1U4 455 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 C1QTNF9BB2RNN3 333 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 H3BUI4 141 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 ARIH2O95376 493 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 APEX1P27695 318 aaKnown RBP3.63□□□□□ -1.83
SNX13-209ENST00000492626 HTR1BP28222 390 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 MAPK10P53779 464 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 NFATC3Q12968 1075 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 ZNF827Q17R98 1081 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 CCDC178Q5BJE1 867 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 CILP2Q8IUL8 1156 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 LILRA2Q8N149 483 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 SH3RF2Q8TEC5 729 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 CAPNS2Q96L46 248 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 B3GNT5Q9BYG0 378 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 TMX4Q9H1E5 349 aaPredicted RBP3.63□□□□□ -1.83
SNX13-209ENST00000492626 ZNF287Q9HBT7 754 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 KIAA1586Q9HCI6 787 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 FEZ2Q9UHY8 353 aaPredicted RBP3.63□□□□□ -1.83
SNX13-209ENST00000492626 CPSF1Q10570 1443 aaKnown RBP3.63□□□□□ -1.83
SNX13-209ENST00000492626 MYPNQ86TC9 1320 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 SH3TC1Q8TE82 1336 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 VPS8Q8N3P4 1428 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 TCRBV5S4A2TA0A5A2 114 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 HRGP04196 525 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 CYBBP04839 570 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 ENO2P09104 434 aaPredicted RBP3.62□□□□□ -1.83
SNX13-209ENST00000492626 RPL17P18621 184 aaKnown RBP3.62□□□□□ -1.83
SNX13-209ENST00000492626 TECP42680 631 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 MMP14P50281 582 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 FKBP1BP68106 108 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 MVKQ03426 396 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 RAB3GAP1Q15042 981 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 POLD3Q15054 466 aaPredicted RBP3.62□□□□□ -1.83
SNX13-209ENST00000492626 NOMO1Q15155 1222 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 PPP1R35Q8TAP8 253 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 COA7Q96BR5 231 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 APOL5Q9BWW9 433 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 SLC12A5Q9H2X9 1139 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 GREM2Q9H772 168 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 CERS4Q9HA82 394 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 PNMA2Q9UL42 364 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 TPCN1Q9ULQ1 816 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 MORC2Q9Y6X9 1032 aaPredicted RBP3.62□□□□□ -1.83
SNX13-209ENST00000492626 TCRBV5S2A0A599 114 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 SLC16A6O15403 523 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 B3GALT2O43825 422 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 ZRANB2O95218 330 aaKnown RBP eCLIP3.62□□□□□ -1.83
SNX13-209ENST00000492626 C4BPAP04003 597 aaKnown RBP3.62□□□□□ -1.83
SNX13-209ENST00000492626 ZGLP1P0C6A0 271 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 FAHP16930 419 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 HALP42357 657 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 GPSM2P81274 684 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 NR0B2Q15466 257 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 SLC44A4Q53GD3 710 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 PITRM1Q5JRX3 1037 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 FAM83BQ5T0W9 1011 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 PGBD2Q6P3X8 592 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 RHOT1Q8IXI2 618 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 TTLL11Q8NHH1 800 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 NRG4Q8WWG1 115 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 TOE1Q96GM8 510 aaKnown RBP3.62□□□□□ -1.83
SNX13-209ENST00000492626 FAM167AQ96KS9 214 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 TDP1Q9NUW8 608 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 GNL3LQ9NVN8 582 aaKnown RBP3.62□□□□□ -1.83
SNX13-209ENST00000492626 DAPK3O43293 454 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 PRAMEF4O60810 478 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 EPHA5P54756 1037 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 TNFAIP2Q03169 654 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 L1TD1Q5T7N2 865 aaKnown RBP3.62□□□□□ -1.83
SNX13-209ENST00000492626 ALG3Q92685 438 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 WRNIP1Q96S55 665 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 CGRRF1Q99675 332 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 VPS11Q9H270 941 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 CDIP1Q9H305 208 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 MTG2Q9H4K7 406 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 PTPRHQ9HD43 1115 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 INCENPQ9NQS7 918 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 ACSL6Q9UKU0 697 aa3.62□□□□□ -1.83
SNX13-209ENST00000492626 CDY2AQ9Y6F7 541 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms