RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 HNRNPA1P09651 372 aaKnown RBP eCLIP14.68□□□□□ -0.06
USF1-206ENST00000491629 TARSP26639 723 aaKnown RBP14.68□□□□□ -0.06
USF1-206ENST00000491629 ATXN1P54253 815 aaKnown RBP14.68□□□□□ -0.06
USF1-206ENST00000491629 PRKCQQ04759 706 aa14.68□□□□□ -0.06
USF1-206ENST00000491629 STK3Q13188 491 aa14.68□□□□□ -0.06
USF1-206ENST00000491629 TUSC3Q13454 348 aa14.68□□□□□ -0.06
USF1-206ENST00000491629 UBXN2BQ14CS0 331 aa14.68□□□□□ -0.06
USF1-206ENST00000491629 PSMD5Q16401 504 aa14.68□□□□□ -0.06
USF1-206ENST00000491629 FAM171A1Q5VUB5 890 aa14.68□□□□□ -0.06
USF1-206ENST00000491629 TSSK4Q6SA08 328 aa14.68□□□□□ -0.06
USF1-206ENST00000491629 CD300LGQ6UXG3 332 aa14.68□□□□□ -0.06
USF1-206ENST00000491629 PIK3AP1Q6ZUJ8 805 aa14.68□□□□□ -0.06
USF1-206ENST00000491629 NPAS3Q8IXF0 933 aa14.68□□□□□ -0.06
USF1-206ENST00000491629 FAM177A1Q8N128 213 aaPredicted RBP14.68□□□□□ -0.06
USF1-206ENST00000491629 ZNF687Q8N1G0 1237 aa14.68□□□□□ -0.06
USF1-206ENST00000491629 CLDN23Q96B33 292 aa14.68□□□□□ -0.06
USF1-206ENST00000491629 ZNF274Q96GC6 653 aaPredicted RBP14.68□□□□□ -0.06
USF1-206ENST00000491629 TRIM6Q9C030 488 aaPredicted RBP14.68□□□□□ -0.06
USF1-206ENST00000491629 PARP2Q9UGN5 583 aa14.68□□□□□ -0.06
USF1-206ENST00000491629 SF3B1O75533 1304 aaKnown RBP eCLIP14.67□□□□□ -0.06
USF1-206ENST00000491629 CCDC194A0A1B0GVG4 234 aa14.67□□□□□ -0.06
USF1-206ENST00000491629 WNT7AO00755 349 aa14.67□□□□□ -0.06
USF1-206ENST00000491629 SPTLC1O15269 473 aa14.67□□□□□ -0.06
USF1-206ENST00000491629 LAMTOR5O43504 91 aa14.67□□□□□ -0.06
USF1-206ENST00000491629 LYPLA2O95372 231 aa14.67□□□□□ -0.06
USF1-206ENST00000491629 GCFC2P16383 781 aaKnown RBP14.67□□□□□ -0.06
USF1-206ENST00000491629 PSMA5P28066 241 aa14.67□□□□□ -0.06
USF1-206ENST00000491629 HOXA9P31269 272 aa14.67□□□□□ -0.06
USF1-206ENST00000491629 RARRES1P49788 294 aa14.67□□□□□ -0.06
USF1-206ENST00000491629 CREMQ03060 361 aa14.67□□□□□ -0.06
USF1-206ENST00000491629 SLC5A9Q2M3M2 681 aa14.67□□□□□ -0.06
USF1-206ENST00000491629 PPM1LQ5SGD2 360 aa14.67□□□□□ -0.06
USF1-206ENST00000491629 CEP57Q86XR8 500 aa14.67□□□□□ -0.06
USF1-206ENST00000491629 SLC7A14Q8TBB6 771 aa14.67□□□□□ -0.06
USF1-206ENST00000491629 ING5Q8WYH8 240 aa14.67□□□□□ -0.06
USF1-206ENST00000491629 EIF2AK1Q9BQI3 630 aaKnown RBP14.67□□□□□ -0.06
USF1-206ENST00000491629 BCO2Q9BYV7 579 aa14.67□□□□□ -0.06
USF1-206ENST00000491629 PARD6AQ9NPB6 346 aa14.67□□□□□ -0.06
USF1-206ENST00000491629 GPRC5CQ9NQ84 441 aa14.67□□□□□ -0.06
USF1-206ENST00000491629 USP20Q9Y2K6 914 aa14.67□□□□□ -0.06
USF1-206ENST00000491629 PCDHGA2Q9Y5H1 932 aa14.67□□□□□ -0.06
USF1-206ENST00000491629 KIF26AQ9ULI4 1882 aaPredicted RBP14.67□□□□□ -0.06
USF1-206ENST00000491629 SDK1Q7Z5N4 2213 aa14.66□□□□□ -0.06
USF1-206ENST00000491629 DGAT1O75907 488 aa14.66□□□□□ -0.06
USF1-206ENST00000491629 POU2F2P09086 479 aa14.66□□□□□ -0.06
USF1-206ENST00000491629 TDGF1P13385 188 aa14.66□□□□□ -0.06
USF1-206ENST00000491629 TFDP1Q14186 410 aa14.66□□□□□ -0.06
USF1-206ENST00000491629 AXDND1Q5T1B0 1012 aaPredicted RBP14.66□□□□□ -0.06
USF1-206ENST00000491629 MTSS1LQ765P7 747 aa14.66□□□□□ -0.06
USF1-206ENST00000491629 PIGOQ8TEQ8 1089 aa14.66□□□□□ -0.06
USF1-206ENST00000491629 TNFRSF25Q93038 417 aa14.66□□□□□ -0.06
USF1-206ENST00000491629 POLR3FQ9H1D9 316 aaPredicted RBP14.66□□□□□ -0.06
USF1-206ENST00000491629 EPC1Q9H2F5 836 aa14.66□□□□□ -0.06
USF1-206ENST00000491629 FZD8Q9H461 694 aa14.66□□□□□ -0.06
USF1-206ENST00000491629 PDZD7Q9H5P4 517 aa14.66□□□□□ -0.06
USF1-206ENST00000491629 ANKEF1Q9NU02 776 aa14.66□□□□□ -0.06
USF1-206ENST00000491629 SNTG2Q9NY99 539 aa14.66□□□□□ -0.06
USF1-206ENST00000491629 NCDNQ9UBB6 729 aa14.66□□□□□ -0.06
USF1-206ENST00000491629 POLIQ9UNA4 740 aa14.66□□□□□ -0.06
USF1-206ENST00000491629 SMG5Q9UPR3 1016 aaKnown RBP14.66□□□□□ -0.06
USF1-206ENST00000491629 GTF3C3Q9Y5Q9 886 aa14.66□□□□□ -0.06
USF1-206ENST00000491629 SPAG17Q6Q759 2223 aa14.66□□□□□ -0.06
USF1-206ENST00000491629 CPLX1O14810 134 aa14.65□□□□□ -0.06
USF1-206ENST00000491629 OR1D2P34982 312 aa14.65□□□□□ -0.06
USF1-206ENST00000491629 NCBP1Q09161 790 aaKnown RBP14.65□□□□□ -0.06
USF1-206ENST00000491629 SCRN1Q12765 414 aa14.65□□□□□ -0.06
USF1-206ENST00000491629 NR5A1Q13285 461 aa14.65□□□□□ -0.06
USF1-206ENST00000491629 RAB33AQ14088 237 aa14.65□□□□□ -0.06
USF1-206ENST00000491629 LIN9Q5TKA1 542 aa14.65□□□□□ -0.06
USF1-206ENST00000491629 PPP4R3CPQ6ZMV5 832 aa14.65□□□□□ -0.06
USF1-206ENST00000491629 TPRG1Q6ZUI0 275 aa14.65□□□□□ -0.06
USF1-206ENST00000491629 BSNDQ8WZ55 320 aa14.65□□□□□ -0.06
USF1-206ENST00000491629 PRMT8Q9NR22 394 aaPredicted RBP14.65□□□□□ -0.06
USF1-206ENST00000491629 HEBP1Q9NRV9 189 aa14.65□□□□□ -0.06
USF1-206ENST00000491629 ZSCAN32Q9NX65 697 aa14.65□□□□□ -0.06
USF1-206ENST00000491629 DCDC2BA2VCK2 349 aa14.64□□□□□ -0.07
USF1-206ENST00000491629 RECQL4O94761 1208 aa14.64□□□□□ -0.07
USF1-206ENST00000491629 CTDNEP1O95476 244 aa14.64□□□□□ -0.07
USF1-206ENST00000491629 FGFR3P22607 806 aa14.64□□□□□ -0.07
USF1-206ENST00000491629 FCARP24071 287 aa14.64□□□□□ -0.07
USF1-206ENST00000491629 RPS9P46781 194 aaKnown RBP14.64□□□□□ -0.07
USF1-206ENST00000491629 MTAPQ13126 283 aa14.64□□□□□ -0.07
USF1-206ENST00000491629 FAM187BQ17R55 369 aa14.64□□□□□ -0.07
USF1-206ENST00000491629 PABPC1LQ4VXU2 614 aaKnown RBP14.64□□□□□ -0.07
USF1-206ENST00000491629 ZBTB41Q5SVQ8 909 aa14.64□□□□□ -0.07
USF1-206ENST00000491629 CDCA2Q69YH5 1023 aaPredicted RBP14.64□□□□□ -0.07
USF1-206ENST00000491629 TANGO2Q6ICL3 276 aa14.64□□□□□ -0.07
USF1-206ENST00000491629 HACE1Q8IYU2 909 aa14.64□□□□□ -0.07
USF1-206ENST00000491629 C3orf58Q8NDZ4 430 aa14.64□□□□□ -0.07
USF1-206ENST00000491629 ATRIPQ8WXE1 791 aa14.64□□□□□ -0.07
USF1-206ENST00000491629 MCRS1Q96EZ8 462 aa14.64□□□□□ -0.07
USF1-206ENST00000491629 MTRRQ9UBK8 725 aa14.64□□□□□ -0.07
USF1-206ENST00000491629 FRYQ5TBA9 3013 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 ANK1P16157 1881 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 LAMA1P25391 3075 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 GREB1Q4ZG55 1949 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 USO1O60763 962 aaKnown RBP14.63□□□□□ -0.07
USF1-206ENST00000491629 XYLBO75191 536 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 ECI2O75521 394 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 THP07101 528 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms