RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 RBAKQ9NYW8 714 aaPredicted RBP11.71□□□□□ -0.53
CACNA1C-227ENST00000491104 CACNG4Q9UBN1 327 aa11.71□□□□□ -0.53
CACNA1C-227ENST00000491104 PLAGL2Q9UPG8 496 aa11.71□□□□□ -0.53
CACNA1C-227ENST00000491104 GIT1Q9Y2X7 761 aa11.71□□□□□ -0.53
CACNA1C-227ENST00000491104 NLRC5Q86WI3 1866 aa11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 LCHNA4D1U4 455 aa11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 PTGESO14684 152 aa11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 KIAA0391O15091 583 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 CETN3O15182 167 aa11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 B4GALT3O60512 393 aa11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 GJB5O95377 273 aa11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 NFICP08651 508 aa11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 RPL13P26373 211 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 ERCC5P28715 1186 aaPredicted RBP11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 FKBP3Q00688 224 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 PPP2R3AQ06190 1150 aa11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 CYP24A1Q07973 514 aa11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 TPD52L1Q16890 204 aaPredicted RBP11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 LRSAM1Q6UWE0 723 aa11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 GLB1LQ6UWU2 654 aa11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 EFCAB13Q8IY85 973 aa11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 ABI1Q8IZP0 508 aa11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 AOPEPQ8N6M6 819 aa11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 GSTCDQ8NEC7 633 aa11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 ZMAT2Q96NC0 199 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 TMEM117Q9H0C3 514 aa11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 PDE11AQ9HCR9 933 aa11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 TOPORSQ9NS56 1045 aaPredicted RBP11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 COLQQ9Y215 455 aaPredicted RBP11.7□□□□□ -0.54
CACNA1C-227ENST00000491104 PTPRJQ12913 1337 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 TTC26A0AVF1 554 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 ZNF233A6NK53 670 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 HOXA2O43364 376 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 TLL1O43897 1013 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 ARHGEF15O94989 841 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 TRIM49P0CI25 452 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 TRIM49CP0CI26 452 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 EPB41P11171 864 aaKnown RBP11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 PBX2P40425 430 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 GUCY2FP51841 1108 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 DLG4P78352 724 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 HTRA4P83105 476 aaPredicted RBP11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 MYBPC2Q14324 1141 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 NCAPHQ15003 741 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 KYAT1Q16773 422 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 CCDC40Q4G0X9 1142 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 NOMO2Q5JPE7 1267 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 JADE1Q6IE81 842 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 ALKAL1Q6UXT8 129 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 FAM43BQ6ZT52 329 aaPredicted RBP11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 CREBRFQ8IUR6 639 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 FAM186BQ8IYM0 893 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 PHOSPHO2Q8TCD6 241 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 URGCPQ8TCY9 931 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 CCDC127Q96BQ5 260 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 ZNF689Q96CS4 500 aaPredicted RBP11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 KIF12Q96FN5 646 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 CEP63Q96MT8 703 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 YME1L1Q96TA2 773 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 POP1Q99575 1024 aaKnown RBP11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 TSPY26PQ9H489 355 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 GOLGA2P5Q9HBQ8 144 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 TBC1D13Q9NVG8 400 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 CNTN3Q9P232 1028 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 FRMD4BQ9Y2L6 1034 aa11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 YBX2Q9Y2T7 364 aaKnown RBP11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 MRPL42Q9Y6G3 142 aaKnown RBP11.69□□□□□ -0.54
CACNA1C-227ENST00000491104 SMIM28A0A1B0GU29 152 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 DDHD2O94830 711 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 DLATP10515 647 aaKnown RBP11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 PSMC2P35998 433 aaKnown RBP11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 ZNF165P49910 485 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 ZNF445P59923 1031 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 SOX4Q06945 474 aaPredicted RBP11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 BTG3Q14201 252 aaPredicted RBP11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 XKR4Q5GH76 650 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 SPATA1Q5VX52 437 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 SCARA3Q6AZY7 606 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 FOXR2Q6PJQ5 311 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 SPRED2Q7Z698 418 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 FILIP1Q7Z7B0 1213 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 ZNF280BQ86YH2 543 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 DHX40Q8IX18 779 aaKnown RBP11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 ENOX1Q8TC92 643 aaKnown RBP11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 TMEM174Q8WUU8 243 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 RABGGTAQ92696 567 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 C18orf25Q96B23 403 aaPredicted RBP11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 CNOT6LQ96LI5 555 aaKnown RBP11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 MFSD14AQ96MC6 490 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 CGRRF1Q99675 332 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 PBX4Q9BYU1 374 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 MMRN2Q9H8L6 949 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 CBX8Q9HC52 389 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 KIAA1586Q9HCI6 787 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 UBN1Q9NPG3 1134 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 SAMSN1Q9NSI8 373 aaKnown RBP11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 TUBGCP4Q9UGJ1 667 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 NFE2L3Q9Y4A8 694 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 CEP290O15078 2479 aa11.68□□□□□ -0.54
CACNA1C-227ENST00000491104 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms