RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 PCYT1AP49585 367 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 MECOMQ03112 1051 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 USP4Q13107 963 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 CYTH1Q15438 398 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 P3H1Q32P28 736 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 HOMEZQ8IX15 550 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 WDR60Q8WVS4 1066 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 PLA2G12BQ9BX93 195 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 APEX2Q9UBZ4 518 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 STARD13Q9Y3M8 1113 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 IFT172Q9UG01 1749 aa11.96□□□□□ -0.49
CRNKL1-204ENST00000490910 SLC16A3O15427 465 aaKnown RBP11.96□□□□□ -0.49
CRNKL1-204ENST00000490910 CFLARO15519 480 aa11.96□□□□□ -0.49
CRNKL1-204ENST00000490910 TJP3O95049 919 aa11.96□□□□□ -0.49
CRNKL1-204ENST00000490910 STAT2P52630 851 aa11.96□□□□□ -0.49
CRNKL1-204ENST00000490910 ADARP55265 1226 aaKnown RBP11.96□□□□□ -0.49
CRNKL1-204ENST00000490910 MARK2Q7KZI7 788 aaKnown RBP11.96□□□□□ -0.49
CRNKL1-204ENST00000490910 ZNF317Q96PQ6 595 aaPredicted RBP11.96□□□□□ -0.49
CRNKL1-204ENST00000490910 WDR35Q9P2L0 1181 aa11.96□□□□□ -0.49
CRNKL1-204ENST00000490910 MAD1L1Q9Y6D9 718 aa11.96□□□□□ -0.49
CRNKL1-204ENST00000490910 RBAK-RBAKDNI3L0D1 243 aa11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 RRP1BQ14684 758 aaKnown RBP11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 AOC3Q16853 763 aa11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 CCDC14Q49A88 953 aa11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 NXNQ6DKJ4 435 aa11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 ANO7Q6IWH7 933 aa11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 AXIN2Q9Y2T1 843 aa11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 TSC22D4Q9Y3Q8 395 aa11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 BTNL10A8MVZ5 291 aa11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 ETS2P15036 469 aa11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 KRT4P19013 534 aa11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 SLC45A4Q5BKX6 768 aa11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 RBM26Q5T8P6 1007 aaKnown RBP11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 MTHFD1LQ6UB35 978 aa11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 NUDCD3Q8IVD9 361 aa11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 ZFAND2BQ8WV99 257 aa11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 JDP2Q8WYK2 163 aa11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 THAP11Q96EK4 314 aa11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 NR1H4Q96RI1 486 aaPredicted RBP11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 KLF6Q99612 283 aaPredicted RBP11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 DDX18Q9NVP1 670 aaKnown RBP11.96□□□□□ -0.5
CRNKL1-204ENST00000490910 CCDC195A0A1B0GUA6 201 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 FKBP6O75344 327 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 TPBGLP0DKB5 382 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 RGS2P41220 211 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 FMO5P49326 533 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 ARSEP51690 589 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 DYNLT1P63172 113 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 NOP14P78316 857 aaKnown RBP11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 HLFQ16534 295 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 IL17AQ16552 155 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 HADHQ16836 314 aaKnown RBP11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 SPRED3Q2MJR0 410 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 ANKMY2Q8IV38 441 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 CATSPER1Q8NEC5 780 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 ASAP3Q8TDY4 903 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 RMDN2Q96LZ7 410 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 DRC3Q9H069 523 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 UVRAGQ9P2Y5 699 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 ZNF189O75820 626 aaPredicted RBP11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 LINGO3P0C6S8 592 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 GCLMP48507 274 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 SERPINB8P50452 374 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 FXR2P51116 673 aaKnown RBP eCLIP11.95□□□□□ -0.51e-6■■■□□ 15
CRNKL1-204ENST00000490910 EFHD1Q9BUP0 239 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 HNRNPRO43390 633 aaKnown RBP11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 TNNI1P19237 187 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 HIF1AQ16665 826 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 HGSNATQ68CP4 663 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 CC2D2BQ6DHV5 1058 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 LRRC6Q86X45 466 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 DAGLBQ8NCG7 672 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 ACAP3Q96P50 834 aa11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 XAB2Q9HCS7 855 aaKnown RBP11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 CHORDC1Q9UHD1 332 aaPredicted RBP11.95□□□□□ -0.5
CRNKL1-204ENST00000490910 DDX39AO00148 427 aaKnown RBP11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 NOP56O00567 594 aaKnown RBP11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 ADAMTS2O95450 1211 aa11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 ABCD1P33897 745 aa11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 PPP2R5CQ13362 524 aa11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 CDCA2Q69YH5 1023 aaPredicted RBP11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 PCGF5Q86SE9 256 aa11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 ECHDC2Q86YB7 292 aa11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 ATP8B4Q8TF62 1192 aa11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 ASCC2Q9H1I8 757 aaPredicted RBP11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 MARCOQ9UEW3 520 aaPredicted RBP11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 DDX3XO00571 662 aaKnown RBP eCLIP11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 GIPC1O14908 333 aa11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 ZBED4O75132 1171 aa11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 CCDC15Q0P6D6 951 aa11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 PRPF39Q86UA1 669 aaKnown RBP11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 ATMINO43313 823 aaPredicted RBP11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 PDE1BQ01064 536 aa11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 LRRC55Q6ZSA7 311 aa11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 RHOT1Q8IXI2 618 aa11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 TBC1D16Q8TBP0 767 aa11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 ATG4AQ8WYN0 398 aa11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 CLIC5Q9NZA1 410 aa11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 DTNAQ9Y4J8 743 aa11.94□□□□□ -0.5
CRNKL1-204ENST00000490910 FLT1P17948 1338 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms