RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 SPECC1Q5M775 1068 aa9.34□□□□□ -0.91
PCOLCE-209ENST00000490909 LARP1BQ659C4 914 aaKnown RBP9.34□□□□□ -0.91
PCOLCE-209ENST00000490909 POTEHQ6S545 545 aa9.34□□□□□ -0.91
PCOLCE-209ENST00000490909 PARM1Q6UWI2 310 aa9.34□□□□□ -0.91
PCOLCE-209ENST00000490909 CYP26C1Q6V0L0 522 aa9.34□□□□□ -0.91
PCOLCE-209ENST00000490909 PPP4R3CPQ6ZMV5 832 aa9.34□□□□□ -0.91
PCOLCE-209ENST00000490909 EXOC8Q8IYI6 725 aa9.34□□□□□ -0.91
PCOLCE-209ENST00000490909 PJA1Q8NG27 643 aa9.34□□□□□ -0.91
PCOLCE-209ENST00000490909 HDAC7Q8WUI4 952 aa9.34□□□□□ -0.91
PCOLCE-209ENST00000490909 STAMQ92783 540 aa9.34□□□□□ -0.91
PCOLCE-209ENST00000490909 MTMR9Q96QG7 549 aa9.34□□□□□ -0.91
PCOLCE-209ENST00000490909 NAP1L4Q99733 375 aaKnown RBP9.34□□□□□ -0.91
PCOLCE-209ENST00000490909 TRIM6Q9C030 488 aaPredicted RBP9.34□□□□□ -0.91
PCOLCE-209ENST00000490909 CCDC113Q9H0I3 377 aa9.34□□□□□ -0.91
PCOLCE-209ENST00000490909 TMEM60Q9H2L4 133 aa9.34□□□□□ -0.91
PCOLCE-209ENST00000490909 PLEKHA4Q9H4M7 779 aa9.34□□□□□ -0.91
PCOLCE-209ENST00000490909 SLC2A4RGQ9NR83 387 aa9.34□□□□□ -0.91
PCOLCE-209ENST00000490909 ANK1P16157 1881 aa9.34□□□□□ -0.91
PCOLCE-209ENST00000490909 KIF26AQ9ULI4 1882 aaPredicted RBP9.34□□□□□ -0.91
PCOLCE-209ENST00000490909 MYH11P35749 1972 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 MAP1BP46821 2468 aaKnown RBP9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 MED19A0JLT2 244 aaPredicted RBP9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 LRRIQ4A6NIV6 560 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 H3BQV1 296 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 NRG2O14511 850 aaPredicted RBP9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 NEMFO60524 1076 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 MED24O75448 989 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 C8AP07357 584 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 KRT2P35908 639 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 ID4P47928 161 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 FOSBP53539 338 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 TUSC3Q13454 348 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 CALCRLQ16602 461 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 EEF1DP3Q658K8 133 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 PHLDB3Q6NSJ2 640 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 CD300LGQ6UXG3 332 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 RSPO2Q6UXX9 243 aaPredicted RBP9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 OTUD6AQ7L8S5 288 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 GRASPQ7Z6J2 395 aaPredicted RBP9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 GPR65Q8IYL9 337 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 LNX1Q8TBB1 728 aaPredicted RBP9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 PIK3R5Q8WYR1 880 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 RMDN1Q96DB5 314 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 KIFC3Q9BVG8 833 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 FOXP1Q9H334 677 aaPredicted RBP9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 TTC12Q9H892 705 aaPredicted RBP9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 ANKEF1Q9NU02 776 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 HCFC1R1Q9NWW0 138 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 SSX2IPQ9Y2D8 614 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 RBM19Q9Y4C8 960 aaKnown RBP9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 USP24Q9UPU5 2620 aa9.33□□□□□ -0.92
PCOLCE-209ENST00000490909 SHISA7A6NL88 538 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 BTBD18B2RXH4 712 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 C1RP00736 705 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 SP9P0CG40 484 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 GPC5P78333 572 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 FOXK2Q01167 660 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 PSMD5Q16401 504 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 FAM187BQ17R55 369 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 SLC5A9Q2M3M2 681 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 GLRA4Q5JXX5 417 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 MAEAQ7L5Y9 396 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 NPAS3Q8IXF0 933 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 DIS3L2Q8IYB7 885 aaKnown RBP9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 C3orf58Q8NDZ4 430 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 ITFG1Q8TB96 612 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 SLC7A14Q8TBB6 771 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 FGF13Q92913 245 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 PRIMPOLQ96LW4 560 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 DDX23Q9BUQ8 820 aaKnown RBP9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 COLEC11Q9BWP8 271 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 FZD8Q9H461 694 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 PIDD1Q9HB75 910 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 GOLGA2P5Q9HBQ8 144 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 SNTG2Q9NY99 539 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 PARP2Q9UGN5 583 aa9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 MTF2Q9Y483 593 aaPredicted RBP9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 NUP210Q8TEM1 1887 aaPredicted RBP9.32□□□□□ -0.92
PCOLCE-209ENST00000490909 NCANO14594 1321 aa9.31□□□□□ -0.92
PCOLCE-209ENST00000490909 CCL16O15467 120 aa9.31□□□□□ -0.92
PCOLCE-209ENST00000490909 MARCH6O60337 910 aa9.31□□□□□ -0.92
PCOLCE-209ENST00000490909 LMNAP02545 664 aaKnown RBP9.31□□□□□ -0.92
PCOLCE-209ENST00000490909 FSHRP23945 695 aa9.31□□□□□ -0.92
PCOLCE-209ENST00000490909 U2AF2P26368 475 aaKnown RBP eCLIP9.31□□□□□ -0.92
PCOLCE-209ENST00000490909 HOXA9P31269 272 aa9.31□□□□□ -0.92
PCOLCE-209ENST00000490909 TXKP42681 527 aa9.31□□□□□ -0.92
PCOLCE-209ENST00000490909 TRAPPC10P48553 1259 aa9.31□□□□□ -0.92
PCOLCE-209ENST00000490909 STARD6P59095 220 aa9.31□□□□□ -0.92
PCOLCE-209ENST00000490909 CREMQ03060 361 aa9.31□□□□□ -0.92
PCOLCE-209ENST00000490909 SOX4Q06945 474 aaPredicted RBP9.31□□□□□ -0.92
PCOLCE-209ENST00000490909 ORC2Q13416 577 aaPredicted RBP9.31□□□□□ -0.92
PCOLCE-209ENST00000490909 GNL2Q13823 731 aaKnown RBP9.31□□□□□ -0.92
PCOLCE-209ENST00000490909 FAM171A1Q5VUB5 890 aa9.31□□□□□ -0.92
PCOLCE-209ENST00000490909 ELMSAN1Q6PJG2 1045 aa9.31□□□□□ -0.92
PCOLCE-209ENST00000490909 DCLRE1AQ6PJP8 1040 aa9.31□□□□□ -0.92
PCOLCE-209ENST00000490909 ERMP1Q7Z2K6 904 aa9.31□□□□□ -0.92
PCOLCE-209ENST00000490909 BRAPQ7Z569 592 aa9.31□□□□□ -0.92
PCOLCE-209ENST00000490909 CATSPER3Q86XQ3 398 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms