RNA–Protein interactions for RNA: ENST00000490710.1

PTK7-217, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-217ENST00000490710 CD302Q8IX05 232 aa17.08■□□□□ 0.32
PTK7-217ENST00000490710 NELFCDQ8IXH7 590 aa17.08■□□□□ 0.32
PTK7-217ENST00000490710 COLGALT2Q8IYK4 626 aa17.08■□□□□ 0.32
PTK7-217ENST00000490710 SNX27Q96L92 541 aa17.08■□□□□ 0.32
PTK7-217ENST00000490710 TSPAN18Q96SJ8 248 aa17.08■□□□□ 0.32
PTK7-217ENST00000490710 LMAN2LQ9H0V9 348 aa17.08■□□□□ 0.32
PTK7-217ENST00000490710 SPG21Q9NZD8 308 aa17.08■□□□□ 0.32
PTK7-217ENST00000490710 LMCD1Q9NZU5 365 aa17.08■□□□□ 0.32
PTK7-217ENST00000490710 DNAJB4Q9UDY4 337 aa17.08■□□□□ 0.32
PTK7-217ENST00000490710 CPSF3Q9UKF6 684 aaKnown RBP17.08■□□□□ 0.32
PTK7-217ENST00000490710 PLAGL2Q9UPG8 496 aa17.08■□□□□ 0.32
PTK7-217ENST00000490710 FAN1Q9Y2M0 1017 aa17.08■□□□□ 0.32
PTK7-217ENST00000490710 PDCD11Q14690 1871 aaKnown RBP17.07■□□□□ 0.32
PTK7-217ENST00000490710 PLXNA4Q9HCM2 1894 aa17.07■□□□□ 0.32
PTK7-217ENST00000490710 COL4A4P53420 1690 aaPredicted RBP17.07■□□□□ 0.32
PTK7-217ENST00000490710 SMIM28A0A1B0GU29 152 aa17.07■□□□□ 0.32
PTK7-217ENST00000490710 LPXNO60711 386 aa17.07■□□□□ 0.32
PTK7-217ENST00000490710 FGF18O76093 207 aa17.07■□□□□ 0.32
PTK7-217ENST00000490710 ADRB2P07550 413 aa17.07■□□□□ 0.32
PTK7-217ENST00000490710 POU3F3P20264 500 aaPredicted RBP17.07■□□□□ 0.32
PTK7-217ENST00000490710 ACOT2P49753 483 aa17.07■□□□□ 0.32
PTK7-217ENST00000490710 KRT17Q04695 432 aa17.07■□□□□ 0.32
PTK7-217ENST00000490710 UBE3AQ05086 875 aa17.07■□□□□ 0.32
PTK7-217ENST00000490710 TUSC3Q13454 348 aa17.07■□□□□ 0.32
PTK7-217ENST00000490710 ZNF658Q5TYW1 1059 aaPredicted RBP17.07■□□□□ 0.32
PTK7-217ENST00000490710 SLC39A11Q8N1S5 342 aa17.07■□□□□ 0.32
PTK7-217ENST00000490710 GOLGA5Q8TBA6 731 aa17.07■□□□□ 0.32
PTK7-217ENST00000490710 MYLIPQ8WY64 445 aa17.07■□□□□ 0.32
PTK7-217ENST00000490710 CXCL16Q9H2A7 254 aa17.07■□□□□ 0.32
PTK7-217ENST00000490710 CNTN3Q9P232 1028 aa17.07■□□□□ 0.32
PTK7-217ENST00000490710 TTC26A0AVF1 554 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 NT5C1B-RDH14C9J2C7 533 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 NRP1O14786 923 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 EXTL3O43909 919 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 ITGB1P05556 798 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 CXCL8P10145 99 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 OR1G1P47890 313 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 SLC11A1P49279 550 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 PPP2R3AQ06190 1150 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 ADGRE1Q14246 886 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 NAB2Q15742 525 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 ENOX2Q16206 610 aaKnown RBP17.06■□□□□ 0.32
PTK7-217ENST00000490710 PTPROQ16827 1216 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 ZBTB41Q5SVQ8 909 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 CRELD2Q6UXH1 353 aaPredicted RBP17.06■□□□□ 0.32
PTK7-217ENST00000490710 GPD1LQ8N335 351 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 GUF1Q8N442 669 aaKnown RBP17.06■□□□□ 0.32
PTK7-217ENST00000490710 SPPL3Q8TCT6 385 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 GDPD5Q8WTR4 605 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 ERCC4Q92889 916 aaPredicted RBP17.06■□□□□ 0.32
PTK7-217ENST00000490710 PPP1R10Q96QC0 940 aaKnown RBP17.06■□□□□ 0.32
PTK7-217ENST00000490710 CBWD1Q9BRT8 395 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 COLEC11Q9BWP8 271 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 PCIF1Q9H4Z3 704 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 KIAA1586Q9HCI6 787 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 ALG13Q9NP73 1137 aaKnown RBP17.06■□□□□ 0.32
PTK7-217ENST00000490710 AGPAT3Q9NRZ7 376 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 SLC38A7Q9NVC3 462 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 PUF60Q9UHX1 559 aaKnown RBP17.06■□□□□ 0.32
PTK7-217ENST00000490710 LZTS1Q9Y250 596 aa17.06■□□□□ 0.32
PTK7-217ENST00000490710 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.06■□□□□ 0.32
PTK7-217ENST00000490710 ANK1P16157 1881 aa17.05■□□□□ 0.32
PTK7-217ENST00000490710 LACTBL1A8MY62 500 aa17.05■□□□□ 0.32
PTK7-217ENST00000490710 PDXKO00764 312 aa17.05■□□□□ 0.32
PTK7-217ENST00000490710 GRM6O15303 877 aa17.05■□□□□ 0.32
PTK7-217ENST00000490710 MEFVO15553 781 aaPredicted RBP17.05■□□□□ 0.32
PTK7-217ENST00000490710 B4GALT3O60512 393 aa17.05■□□□□ 0.32
PTK7-217ENST00000490710 IGFBP4P22692 258 aa17.05■□□□□ 0.32
PTK7-217ENST00000490710 PBX3P40426 434 aa17.05■□□□□ 0.32
PTK7-217ENST00000490710 HSP90AA2PQ14568 343 aaPredicted RBP17.05■□□□□ 0.32
PTK7-217ENST00000490710 GLRA4Q5JXX5 417 aa17.05■□□□□ 0.32
PTK7-217ENST00000490710 C12orf56Q8IXR9 622 aa17.05■□□□□ 0.32
PTK7-217ENST00000490710 POF1BQ8WVV4 589 aa17.05■□□□□ 0.32
PTK7-217ENST00000490710 TMEM169Q96HH4 297 aa17.05■□□□□ 0.32
PTK7-217ENST00000490710 IGSF21Q96ID5 467 aa17.05■□□□□ 0.32
PTK7-217ENST00000490710 ZMAT2Q96NC0 199 aaKnown RBP17.05■□□□□ 0.32
PTK7-217ENST00000490710 FAM213AQ9BRX8 229 aa17.05■□□□□ 0.32
PTK7-217ENST00000490710 KCTD10Q9H3F6 313 aa17.05■□□□□ 0.32
PTK7-217ENST00000490710 ASB7Q9H672 318 aa17.05■□□□□ 0.32
PTK7-217ENST00000490710 CLIC2O15247 247 aa17.04■□□□□ 0.32
PTK7-217ENST00000490710 FOSL2P15408 326 aa17.04■□□□□ 0.32
PTK7-217ENST00000490710 CAMK4Q16566 473 aa17.04■□□□□ 0.32
PTK7-217ENST00000490710 COBLL1Q53SF7 1204 aa17.04■□□□□ 0.32
PTK7-217ENST00000490710 TMEM174Q8WUU8 243 aa17.04■□□□□ 0.32
PTK7-217ENST00000490710 MRPL38Q96DV4 380 aaKnown RBP17.04■□□□□ 0.32
PTK7-217ENST00000490710 FAM212AQ96EL1 285 aa17.04■□□□□ 0.32
PTK7-217ENST00000490710 SAAL1Q96ER3 474 aa17.04■□□□□ 0.32
PTK7-217ENST00000490710 UROC1Q96N76 676 aa17.04■□□□□ 0.32
PTK7-217ENST00000490710 HSPBP1Q9NZL4 362 aa17.04■□□□□ 0.32
PTK7-217ENST00000490710 STK39Q9UEW8 545 aa17.04■□□□□ 0.32
PTK7-217ENST00000490710 MAN1B1Q9UKM7 699 aa17.04■□□□□ 0.32
PTK7-217ENST00000490710 MAPK8IP1Q9UQF2 711 aa17.04■□□□□ 0.32
PTK7-217ENST00000490710 DERAQ9Y315 318 aa17.04■□□□□ 0.32
PTK7-217ENST00000490710 MTCH2Q9Y6C9 303 aa17.04■□□□□ 0.32
PTK7-217ENST00000490710 GOLGA8IPA6NC78 632 aa17.03■□□□□ 0.32
PTK7-217ENST00000490710 ZNF233A6NK53 670 aa17.03■□□□□ 0.32
PTK7-217ENST00000490710 GOLGA8JA6NMD2 632 aa17.03■□□□□ 0.32
PTK7-217ENST00000490710 XPOTO43592 962 aaKnown RBP17.03■□□□□ 0.32
PTK7-217ENST00000490710 CALUO43852 315 aaPredicted RBP17.03■□□□□ 0.32
PTK7-217ENST00000490710 IL18RAPO95256 599 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms