RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 RABGGTAQ92696 567 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 TMEM169Q96HH4 297 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 CCDC34Q96HJ3 373 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 IGSF21Q96ID5 467 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 SNX27Q96L92 541 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 TMEM175Q9BSA9 504 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 LMAN2LQ9H0V9 348 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 TMEM206Q9H813 350 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 MARCH5Q9NX47 278 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 AGO2Q9UKV8 859 aaKnown RBP10.02□□□□□ -0.81
ECM1-205ENST00000490346 FAN1Q9Y2M0 1017 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 STYXL1Q9Y6J8 313 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 COL6A3P12111 3177 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 TRIP11Q15643 1979 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 CITO14578 2027 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 REV3LO60673 3130 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 SMIM28A0A1B0GU29 152 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 CASTOR2A6NHX0 329 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 F8W810 466 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 NRP1O14786 923 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 PRPF40AO75400 957 aaKnown RBP10.01□□□□□ -0.81
ECM1-205ENST00000490346 RPN1P04843 607 aaKnown RBP10.01□□□□□ -0.81
ECM1-205ENST00000490346 CLTAP09496 248 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 IRS1P35568 1242 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 ACOT2P49753 483 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 UBE2HP62256 183 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 UBE3AQ05086 875 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 STK4Q13043 487 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 TUSC3Q13454 348 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 PNOCQ13519 176 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 NAB2Q15742 525 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 ENOX2Q16206 610 aaKnown RBP10.01□□□□□ -0.81
ECM1-205ENST00000490346 SLC10A6Q3KNW5 377 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 XKR4Q5GH76 650 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 KANK3Q6NY19 840 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 ALKAL1Q6UXT8 129 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 KIAA0895Q8NCT3 520 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 ZNF507Q8TCN5 953 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 CCDC47Q96A33 483 aaKnown RBP10.01□□□□□ -0.81
ECM1-205ENST00000490346 ZMAT2Q96NC0 199 aaKnown RBP10.01□□□□□ -0.81
ECM1-205ENST00000490346 PPP1R10Q96QC0 940 aaKnown RBP10.01□□□□□ -0.81
ECM1-205ENST00000490346 CBWD1Q9BRT8 395 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 LMCD1Q9NZU5 365 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 CNTN3Q9P232 1028 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 PCDHGC5Q9Y5F6 944 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 UBE4BO95155 1302 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 MYO7AQ13402 2215 aa10.01□□□□□ -0.81
ECM1-205ENST00000490346 TTC26A0AVF1 554 aa10□□□□□ -0.81
ECM1-205ENST00000490346 CARNS1A5YM72 827 aa10□□□□□ -0.81
ECM1-205ENST00000490346 LACTBL1A8MY62 500 aa10□□□□□ -0.81
ECM1-205ENST00000490346 TGFB1I1O43294 461 aa10□□□□□ -0.81
ECM1-205ENST00000490346 KINO60870 393 aaKnown RBP10□□□□□ -0.81
ECM1-205ENST00000490346 KCNE1P15382 129 aa10□□□□□ -0.81
ECM1-205ENST00000490346 ERVFC1P60507 584 aa10□□□□□ -0.81
ECM1-205ENST00000490346 PPP2R3AQ06190 1150 aa10□□□□□ -0.81
ECM1-205ENST00000490346 SPAG1Q07617 926 aa10□□□□□ -0.81
ECM1-205ENST00000490346 PSMD2Q13200 908 aa10□□□□□ -0.81
ECM1-205ENST00000490346 KYAT1Q16773 422 aa10□□□□□ -0.81
ECM1-205ENST00000490346 BMT2Q1RMZ1 405 aa10□□□□□ -0.81
ECM1-205ENST00000490346 TIGD5Q53EQ6 642 aa10□□□□□ -0.81
ECM1-205ENST00000490346 PLPP4Q5VZY2 271 aa10□□□□□ -0.81
ECM1-205ENST00000490346 ARMCX5Q6P1M9 558 aa10□□□□□ -0.81
ECM1-205ENST00000490346 CLEC17AQ6ZS10 378 aa10□□□□□ -0.81
ECM1-205ENST00000490346 DDX53Q86TM3 631 aaKnown RBP10□□□□□ -0.81
ECM1-205ENST00000490346 ZSWIM2Q8NEG5 633 aa10□□□□□ -0.81
ECM1-205ENST00000490346 MICAL1Q8TDZ2 1067 aa10□□□□□ -0.81
ECM1-205ENST00000490346 NOC3LQ8WTT2 800 aaKnown RBP10□□□□□ -0.81
ECM1-205ENST00000490346 ERCC4Q92889 916 aaPredicted RBP10□□□□□ -0.81
ECM1-205ENST00000490346 C18orf25Q96B23 403 aaPredicted RBP10□□□□□ -0.81
ECM1-205ENST00000490346 FAM212AQ96EL1 285 aa10□□□□□ -0.81
ECM1-205ENST00000490346 SAAL1Q96ER3 474 aa10□□□□□ -0.81
ECM1-205ENST00000490346 TIGD1Q96MW7 591 aa10□□□□□ -0.81
ECM1-205ENST00000490346 TCF25Q9BQ70 676 aa10□□□□□ -0.81
ECM1-205ENST00000490346 PAAF1Q9BRP4 392 aa10□□□□□ -0.81
ECM1-205ENST00000490346 FAM213AQ9BRX8 229 aa10□□□□□ -0.81
ECM1-205ENST00000490346 VN1R3Q9BXE9 311 aa10□□□□□ -0.81
ECM1-205ENST00000490346 PCIF1Q9H4Z3 704 aa10□□□□□ -0.81
ECM1-205ENST00000490346 NSUN3Q9H649 340 aaKnown RBP10□□□□□ -0.81
ECM1-205ENST00000490346 RPF1Q9H9Y2 349 aaKnown RBP10□□□□□ -0.81
ECM1-205ENST00000490346 PLEKHA5Q9HAU0 1116 aa10□□□□□ -0.81
ECM1-205ENST00000490346 GOLGA2P5Q9HBQ8 144 aa10□□□□□ -0.81
ECM1-205ENST00000490346 ENTPD7Q9NQZ7 604 aa10□□□□□ -0.81
ECM1-205ENST00000490346 TLR9Q9NR96 1032 aa10□□□□□ -0.81
ECM1-205ENST00000490346 PUF60Q9UHX1 559 aaKnown RBP10□□□□□ -0.81
ECM1-205ENST00000490346 CPSF3Q9UKF6 684 aaKnown RBP10□□□□□ -0.81
ECM1-205ENST00000490346 LZTS1Q9Y250 596 aa10□□□□□ -0.81
ECM1-205ENST00000490346 PDCD11Q14690 1871 aaKnown RBP10□□□□□ -0.81
ECM1-205ENST00000490346 GOLGA8IPA6NC78 632 aa9.99□□□□□ -0.81
ECM1-205ENST00000490346 GOLGA8JA6NMD2 632 aa9.99□□□□□ -0.81
ECM1-205ENST00000490346 TULP1O00294 542 aaPredicted RBP9.99□□□□□ -0.81
ECM1-205ENST00000490346 FSCN2O14926 492 aa9.99□□□□□ -0.81
ECM1-205ENST00000490346 CLIC2O15247 247 aa9.99□□□□□ -0.81
ECM1-205ENST00000490346 RHOBTB3O94955 611 aa9.99□□□□□ -0.81
ECM1-205ENST00000490346 GARTP22102 1010 aa9.99□□□□□ -0.81
ECM1-205ENST00000490346 SOX4Q06945 474 aaPredicted RBP9.99□□□□□ -0.81
ECM1-205ENST00000490346 HSP90AA2PQ14568 343 aaPredicted RBP9.99□□□□□ -0.81
ECM1-205ENST00000490346 KCNB1Q14721 858 aa9.99□□□□□ -0.81
ECM1-205ENST00000490346 SKIV2LQ15477 1246 aaKnown RBP9.99□□□□□ -0.81
ECM1-205ENST00000490346 KNOP1Q1ED39 458 aaKnown RBP9.99□□□□□ -0.81
ECM1-205ENST00000490346 TCEAL5Q5H9L2 206 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms