RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 GTF2IRD2BQ6EKJ0 949 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 PRR5LQ6MZQ0 368 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 PAQR3Q6TCH7 311 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 RPAINQ86UA6 219 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 GTF2IRD2Q86UP8 949 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 ZNF227Q86WZ6 799 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 FAM178BQ8IXR5 827 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 CLASRPQ8N2M8 674 aaKnown RBP3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 FSIP1Q8NA03 581 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 NSUN7Q8NE18 718 aaKnown RBP3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 BVESQ8NE79 360 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 ZNF526Q8TF50 670 aaPredicted RBP3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 ARMC5Q96C12 935 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 DDX11Q96FC9 970 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 CAMKK2Q96RR4 588 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 MMP19Q99542 508 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 CARD6Q9BX69 1037 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 XPO4Q9C0E2 1151 aaKnown RBP3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 CDIP1Q9H305 208 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 CAPN10Q9HC96 672 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 ARFGAP3Q9NP61 516 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 A1CFQ9NQ94 594 aaKnown RBP3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 USP40Q9NVE5 1235 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 CWC25Q9NXE8 425 aaPredicted RBP3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 ACTR10Q9NZ32 417 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 C9orf78Q9NZ63 289 aaPredicted RBP3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 C11orf21Q9P2W6 132 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 TRMT112Q9UI30 125 aaKnown RBP3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 ADAM21Q9UKJ8 722 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 HDAC5Q9UQL6 1122 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 JRKLQ9Y4A0 524 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 PCDHAC2Q9Y5I4 1007 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 ATXN2Q99700 1313 aaKnown RBP3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 PHIPQ8WWQ0 1821 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 A0A0D9SFI3 127 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 SHTN1A0MZ66 631 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 PTPDC1A2A3K4 754 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 EIF3CLB5ME19 914 aaKnown RBP3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 POLRMTO00411 1230 aaKnown RBP3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 ABLIM1O14639 778 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 POLR3GO15318 223 aaPredicted RBP3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 TPD52L2O43399 206 aaKnown RBP3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 SUSD5O60279 629 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 SHOX2O60902 331 aaPredicted RBP3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 PPFIA4O75335 1185 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 RPS6KA4O75676 772 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 PPM1BO75688 479 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 EIF3JO75822 258 aaKnown RBP3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 ITGAVP06756 1048 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 MMP10P09238 476 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 IFIT2P09913 472 aaKnown RBP3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 PLS3P13797 630 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 ZNF18P17022 549 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 GTF2A1P52655 376 aaPredicted RBP3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 ATXN1P54253 815 aaKnown RBP3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 NCKAP1LP55160 1127 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 IGBP1P78318 339 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 ZNF200P98182 395 aaPredicted RBP3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 AMPD2Q01433 879 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 MYL5Q02045 173 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 SCRN1Q12765 414 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 TCIRG1Q13488 830 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 SF1Q15637 639 aaKnown RBP3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 PPP2R5EQ16537 467 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 SLC10A6Q3KNW5 377 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 TTC31Q49AM3 519 aaPredicted RBP3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 EGFLAMQ63HQ2 1017 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 SDE2Q6IQ49 451 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 TMED8Q6PL24 325 aaPredicted RBP3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 LEKR1Q6ZMV7 388 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 MMS22LQ6ZRQ5 1243 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 SRGAP1Q7Z6B7 1085 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 AACSQ86V21 672 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 EFCAB13Q8IY85 973 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 ZNF34Q8IZ26 560 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 LINC00301Q8NCQ3 95 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 LINS1Q8NG48 757 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 FAM71BQ8TC56 605 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 KCNG4Q8TDN1 519 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 BTN2A2Q8WVV5 523 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 PPM1EQ8WY54 764 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 GOLGA1Q92805 767 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 TSPAN17Q96FV3 270 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 FAM227BQ96M60 508 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 C8orf49Q96NF6 230 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 USP28Q96RU2 1077 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 WDR24Q96S15 920 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 CEP89Q96ST8 783 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 SEC62Q99442 399 aaKnown RBP3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 EIF3CQ99613 913 aaKnown RBP3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 TACO1Q9BSH4 297 aaKnown RBP3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 PARD6BQ9BYG5 372 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 FAM107BQ9H098 131 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 ANKZF1Q9H8Y5 726 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 VIPAS39Q9H9C1 493 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 MED4Q9NPJ6 270 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 GPRC5CQ9NQ84 441 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 CYP26B1Q9NR63 512 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 INTS13Q9NVM9 706 aa3.87□□□□□ -1.79
CRNKL1-203ENST00000490258 TFCP2L1Q9NZI6 479 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms