RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 CDC45O75419 566 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 ARF4P18085 180 aaPredicted RBP9.11□□□□□ -0.95
USP39-216ENST00000490193 RPL17P18621 184 aaKnown RBP9.11□□□□□ -0.95
USP39-216ENST00000490193 RPS9P46781 194 aaKnown RBP9.11□□□□□ -0.95
USP39-216ENST00000490193 PFKPQ01813 784 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 MBTD1Q05BQ5 628 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 SSRP1Q08945 709 aaKnown RBP9.11□□□□□ -0.95
USP39-216ENST00000490193 SPIRE1Q08AE8 756 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 TFDP1Q14186 410 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 HSP90AA2PQ14568 343 aaPredicted RBP9.11□□□□□ -0.95
USP39-216ENST00000490193 INF2Q27J81 1249 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 RTP2Q5QGT7 225 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 SLC27A1Q6PCB7 646 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 RTL10Q7L3V2 364 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 GRASPQ7Z6J2 395 aaPredicted RBP9.11□□□□□ -0.95
USP39-216ENST00000490193 HAS1Q92839 578 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 FGF13Q92913 245 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 CLDN23Q96B33 292 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 CPB2Q96IY4 423 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 MTRQ99707 1265 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 CLSTN3Q9BQT9 956 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 TRIM6Q9C030 488 aaPredicted RBP9.11□□□□□ -0.95
USP39-216ENST00000490193 EPC1Q9H2F5 836 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 ZSWIM4Q9H7M6 989 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 LTB4R2Q9NPC1 389 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 NCDNQ9UBB6 729 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 VPS9D1Q9Y2B5 631 aa9.11□□□□□ -0.95
USP39-216ENST00000490193 A0A1B0GUA9 196 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 PRR5-ARHGAP8B1AHC4 643 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 INO80B-WBP1J3KQ70 363 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 XYLBO75191 536 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 TADA2AO75478 443 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 LYPLA2O95372 231 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 C8AP07357 584 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 PSMA5P28066 241 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 ARL2P36404 184 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 CCT2P78371 535 aaKnown RBP9.1□□□□□ -0.95
USP39-216ENST00000490193 ARHGAP8P85298 464 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 TUSC3Q13454 348 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 SNW1Q13573 536 aaKnown RBP9.1□□□□□ -0.95
USP39-216ENST00000490193 CAPSQ13938 189 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 UVSSAQ2YD98 709 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 SLC44A4Q53GD3 710 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 XKR9Q5GH70 373 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 PPM1LQ5SGD2 360 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 LIN9Q5TKA1 542 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 PDXDC1Q6P996 788 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 PRSS55Q6UWB4 352 aaPredicted RBP9.1□□□□□ -0.95
USP39-216ENST00000490193 NEK8Q86SG6 692 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 GLYCTKQ8IVS8 523 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 LNX1Q8TBB1 728 aaPredicted RBP9.1□□□□□ -0.95
USP39-216ENST00000490193 DYDC2Q96IM9 177 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 NELL2Q99435 816 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 NAP1L4Q99733 375 aaKnown RBP9.1□□□□□ -0.95
USP39-216ENST00000490193 TTPALQ9BTX7 342 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 APOL6Q9BWW8 343 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 FAM126AQ9BYI3 521 aaPredicted RBP9.1□□□□□ -0.95
USP39-216ENST00000490193 PRMT8Q9NR22 394 aaPredicted RBP9.1□□□□□ -0.95
USP39-216ENST00000490193 SPATA6Q9NWH7 488 aaPredicted RBP9.1□□□□□ -0.95
USP39-216ENST00000490193 ZSCAN32Q9NX65 697 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 RGL1Q9NZL6 768 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 KCNH3Q9ULD8 1083 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 SMG5Q9UPR3 1016 aaKnown RBP9.1□□□□□ -0.95
USP39-216ENST00000490193 MTF2Q9Y483 593 aaPredicted RBP9.1□□□□□ -0.95
USP39-216ENST00000490193 BAHCC1Q9P281 2608 aa9.1□□□□□ -0.95
USP39-216ENST00000490193 SPTBN2O15020 2390 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 FAM170BA6NMN3 283 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 ZBTB39O15060 712 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 B4GALT5O43286 388 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 TBC1D4O60343 1298 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 ECI2O75521 394 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 DGAT1O75907 488 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 TGM1P22735 817 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 AKAP5P24588 427 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 ATXN1P54253 815 aaKnown RBP9.09□□□□□ -0.95
USP39-216ENST00000490193 NTHL1P78549 312 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 LMNB2Q03252 620 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 CSTF1Q05048 431 aaKnown RBP9.09□□□□□ -0.95
USP39-216ENST00000490193 ELAVL2Q12926 359 aaKnown RBP9.09□□□□□ -0.95
USP39-216ENST00000490193 RAB33AQ14088 237 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 TOB2Q14106 344 aaPredicted RBP9.09□□□□□ -0.95
USP39-216ENST00000490193 UBXN2BQ14CS0 331 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 NAB2Q15742 525 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 PSMD5Q16401 504 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 ZBTB41Q5SVQ8 909 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 NPAS3Q8IXF0 933 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 ST13P5Q8NFI4 369 aaPredicted RBP9.09□□□□□ -0.95
USP39-216ENST00000490193 ITFG1Q8TB96 612 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 ASAP3Q8TDY4 903 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 ATRIPQ8WXE1 791 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 SECISBP2LQ93073 1101 aaKnown RBP9.09□□□□□ -0.95
USP39-216ENST00000490193 ZNF274Q96GC6 653 aaPredicted RBP9.09□□□□□ -0.95
USP39-216ENST00000490193 PRIMPOLQ96LW4 560 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 AIFM3Q96NN9 605 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 PAAF1Q9BRP4 392 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 PHF20Q9BVI0 1012 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 SLKQ9H2G2 1235 aaPredicted RBP9.09□□□□□ -0.95
USP39-216ENST00000490193 AVENQ9NQS1 362 aaPredicted RBP9.09□□□□□ -0.95
USP39-216ENST00000490193 ANKEF1Q9NU02 776 aa9.09□□□□□ -0.95
USP39-216ENST00000490193 MAP1BP46821 2468 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms