RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 LYPLA2O95372 231 aa15.47■□□□□ 0.07
VARS-227ENST00000489979 BAG4O95429 457 aaKnown RBP15.47■□□□□ 0.07
VARS-227ENST00000489979 MAGEA9P43362 315 aa15.47■□□□□ 0.07
VARS-227ENST00000489979 EARS2Q5JPH6 523 aaKnown RBP15.47■□□□□ 0.07
VARS-227ENST00000489979 RSPO2Q6UXX9 243 aaPredicted RBP15.47■□□□□ 0.07
VARS-227ENST00000489979 SLC7A14Q8TBB6 771 aa15.47■□□□□ 0.07
VARS-227ENST00000489979 POLR3FQ9H1D9 316 aaPredicted RBP15.47■□□□□ 0.07
VARS-227ENST00000489979 GJB4Q9NTQ9 266 aa15.47■□□□□ 0.07
VARS-227ENST00000489979 ANKEF1Q9NU02 776 aa15.47■□□□□ 0.07
VARS-227ENST00000489979 HCFC1R1Q9NWW0 138 aa15.47■□□□□ 0.07
VARS-227ENST00000489979 ZSCAN32Q9NX65 697 aa15.47■□□□□ 0.07
VARS-227ENST00000489979 CYP46A1Q9Y6A2 500 aa15.47■□□□□ 0.07
VARS-227ENST00000489979 PTGESO14684 152 aa15.46■□□□□ 0.07
VARS-227ENST00000489979 KRT37O76014 449 aa15.46■□□□□ 0.07
VARS-227ENST00000489979 POU2F2P09086 479 aa15.46■□□□□ 0.07
VARS-227ENST00000489979 TARSP26639 723 aaKnown RBP15.46■□□□□ 0.07
VARS-227ENST00000489979 RARRES1P49788 294 aa15.46■□□□□ 0.07
VARS-227ENST00000489979 ATXN1P54253 815 aaKnown RBP15.46■□□□□ 0.07
VARS-227ENST00000489979 PABPC1LQ4VXU2 614 aaKnown RBP15.46■□□□□ 0.07
VARS-227ENST00000489979 ZBTB41Q5SVQ8 909 aa15.46■□□□□ 0.07
VARS-227ENST00000489979 AXDND1Q5T1B0 1012 aaPredicted RBP15.46■□□□□ 0.07
VARS-227ENST00000489979 TSSK4Q6SA08 328 aa15.46■□□□□ 0.07
VARS-227ENST00000489979 TPRG1Q6ZUI0 275 aa15.46■□□□□ 0.07
VARS-227ENST00000489979 CENPQQ7L2Z9 268 aaPredicted RBP15.46■□□□□ 0.07
VARS-227ENST00000489979 NPAS3Q8IXF0 933 aa15.46■□□□□ 0.07
VARS-227ENST00000489979 GPR161Q8N6U8 529 aaKnown RBP15.46■□□□□ 0.07
VARS-227ENST00000489979 ZBTB44Q8NCP5 570 aa15.46■□□□□ 0.07
VARS-227ENST00000489979 ING5Q8WYH8 240 aa15.46■□□□□ 0.07
VARS-227ENST00000489979 SECISBP2LQ93073 1101 aaKnown RBP15.46■□□□□ 0.07
VARS-227ENST00000489979 CCDC43Q96MW1 224 aaKnown RBP15.46■□□□□ 0.07
VARS-227ENST00000489979 HSD17B14Q9BPX1 270 aa15.46■□□□□ 0.07
VARS-227ENST00000489979 CXCL16Q9H2A7 254 aa15.46■□□□□ 0.07
VARS-227ENST00000489979 SNTG2Q9NY99 539 aa15.46■□□□□ 0.07
VARS-227ENST00000489979 DNMT3BQ9UBC3 853 aaKnown RBP15.46■□□□□ 0.07
VARS-227ENST00000489979 SMG5Q9UPR3 1016 aaKnown RBP15.46■□□□□ 0.07
VARS-227ENST00000489979 A0A087WWV3 80 aa15.45■□□□□ 0.06
VARS-227ENST00000489979 FAM205CA6NFA0 338 aa15.45■□□□□ 0.06
VARS-227ENST00000489979 LRRIQ4A6NIV6 560 aa15.45■□□□□ 0.06
VARS-227ENST00000489979 THP07101 528 aa15.45■□□□□ 0.06
VARS-227ENST00000489979 XBP1P17861 261 aa15.45■□□□□ 0.06
VARS-227ENST00000489979 SDHBP21912 280 aa15.45■□□□□ 0.06
VARS-227ENST00000489979 OR1D2P34982 312 aa15.45■□□□□ 0.06
VARS-227ENST00000489979 ELAVL2Q12926 359 aaKnown RBP15.45■□□□□ 0.06
VARS-227ENST00000489979 RAB33AQ14088 237 aa15.45■□□□□ 0.06
VARS-227ENST00000489979 UVSSAQ2YD98 709 aa15.45■□□□□ 0.06
VARS-227ENST00000489979 PDXDC1Q6P996 788 aa15.45■□□□□ 0.06
VARS-227ENST00000489979 PPP4R3CPQ6ZMV5 832 aa15.45■□□□□ 0.06
VARS-227ENST00000489979 MAEAQ7L5Y9 396 aa15.45■□□□□ 0.06
VARS-227ENST00000489979 PIGOQ8TEQ8 1089 aa15.45■□□□□ 0.06
VARS-227ENST00000489979 NELL1Q92832 810 aa15.45■□□□□ 0.06
VARS-227ENST00000489979 CLDN23Q96B33 292 aa15.45■□□□□ 0.06
VARS-227ENST00000489979 EPC1Q9H2F5 836 aa15.45■□□□□ 0.06
VARS-227ENST00000489979 GPRC5CQ9NQ84 441 aa15.45■□□□□ 0.06
VARS-227ENST00000489979 PRMT7Q9NVM4 692 aaPredicted RBP15.45■□□□□ 0.06
VARS-227ENST00000489979 KCNH3Q9ULD8 1083 aa15.45■□□□□ 0.06
VARS-227ENST00000489979 ACACBO00763 2458 aa15.45■□□□□ 0.06
VARS-227ENST00000489979 TTLL13PA6NNM8 815 aa15.44■□□□□ 0.06
VARS-227ENST00000489979 NCAM2O15394 837 aa15.44■□□□□ 0.06
VARS-227ENST00000489979 USO1O60763 962 aaKnown RBP15.44■□□□□ 0.06
VARS-227ENST00000489979 DTNBO60941 627 aa15.44■□□□□ 0.06
VARS-227ENST00000489979 LILRB5O75023 590 aa15.44■□□□□ 0.06
VARS-227ENST00000489979 RECQL4O94761 1208 aa15.44■□□□□ 0.06
VARS-227ENST00000489979 REC8O95072 547 aa15.44■□□□□ 0.06
VARS-227ENST00000489979 NAB2Q15742 525 aa15.44■□□□□ 0.06
VARS-227ENST00000489979 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.44■□□□□ 0.06
VARS-227ENST00000489979 MCRS1Q96EZ8 462 aa15.44■□□□□ 0.06
VARS-227ENST00000489979 PRIMPOLQ96LW4 560 aa15.44■□□□□ 0.06
VARS-227ENST00000489979 NELL2Q99435 816 aa15.44■□□□□ 0.06
VARS-227ENST00000489979 PLA2G2FQ9BZM2 168 aa15.44■□□□□ 0.06
VARS-227ENST00000489979 FZD8Q9H461 694 aa15.44■□□□□ 0.06
VARS-227ENST00000489979 PDZD7Q9H5P4 517 aa15.44■□□□□ 0.06
VARS-227ENST00000489979 CDV3Q9UKY7 258 aaKnown RBP15.44■□□□□ 0.06
VARS-227ENST00000489979 USP18Q9UMW8 372 aa15.44■□□□□ 0.06
VARS-227ENST00000489979 PCDHA12Q9UN75 941 aa15.44■□□□□ 0.06
VARS-227ENST00000489979 MRPS23Q9Y3D9 190 aaKnown RBP15.44■□□□□ 0.06
VARS-227ENST00000489979 PRR5-ARHGAP8B1AHC4 643 aa15.43■□□□□ 0.06
VARS-227ENST00000489979 N4BP3O15049 544 aa15.43■□□□□ 0.06
VARS-227ENST00000489979 ECI2O75521 394 aa15.43■□□□□ 0.06
VARS-227ENST00000489979 CDKL5O76039 1030 aa15.43■□□□□ 0.06
VARS-227ENST00000489979 IGFBP6P24592 240 aaPredicted RBP15.43■□□□□ 0.06
VARS-227ENST00000489979 RPS9P46781 194 aaKnown RBP15.43■□□□□ 0.06
VARS-227ENST00000489979 ARHGAP8P85298 464 aa15.43■□□□□ 0.06
VARS-227ENST00000489979 LMNB2Q03252 620 aa15.43■□□□□ 0.06
VARS-227ENST00000489979 SCRN1Q12765 414 aa15.43■□□□□ 0.06
VARS-227ENST00000489979 CDCA2Q69YH5 1023 aaPredicted RBP15.43■□□□□ 0.06
VARS-227ENST00000489979 ZNF852Q6ZMS4 543 aa15.43■□□□□ 0.06
VARS-227ENST00000489979 ZBTB8OSQ8IWT0 167 aa15.43■□□□□ 0.06
VARS-227ENST00000489979 PRMT8Q9NR22 394 aaPredicted RBP15.43■□□□□ 0.06
VARS-227ENST00000489979 HEBP1Q9NRV9 189 aa15.43■□□□□ 0.06
VARS-227ENST00000489979 MTRRQ9UBK8 725 aa15.43■□□□□ 0.06
VARS-227ENST00000489979 CDY1Q9Y6F8 540 aa15.43■□□□□ 0.06
VARS-227ENST00000489979 TRIP11Q15643 1979 aa15.43■□□□□ 0.06
VARS-227ENST00000489979 KMT2BQ9UMN6 2715 aaPredicted RBP15.43■□□□□ 0.06
VARS-227ENST00000489979 F5P12259 2224 aa15.43■□□□□ 0.06
VARS-227ENST00000489979 STK36Q9NRP7 1315 aa15.43■□□□□ 0.06
VARS-227ENST00000489979 DCDC2BA2VCK2 349 aa15.42■□□□□ 0.06
VARS-227ENST00000489979 TBC1D4O60343 1298 aa15.42■□□□□ 0.06
VARS-227ENST00000489979 RHOP08100 348 aa15.42■□□□□ 0.06
VARS-227ENST00000489979 FGFR3P22607 806 aa15.42■□□□□ 0.06
VARS-227ENST00000489979 TGM1P22735 817 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms