RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 HOXA11P31270 313 aaPredicted RBP16.36■□□□□ 0.21
SDHAF3-204ENST00000489852 SREBF1P36956 1147 aa16.36■□□□□ 0.21
SDHAF3-204ENST00000489852 VIPR2P41587 438 aa16.36■□□□□ 0.21
SDHAF3-204ENST00000489852 PDE1AP54750 535 aa16.36■□□□□ 0.21
SDHAF3-204ENST00000489852 RAB33AQ14088 237 aa16.36■□□□□ 0.21
SDHAF3-204ENST00000489852 FAM171A1Q5VUB5 890 aa16.36■□□□□ 0.21
SDHAF3-204ENST00000489852 TXNDC11Q6PKC3 985 aa16.36■□□□□ 0.21
SDHAF3-204ENST00000489852 CWC27Q6UX04 472 aaKnown RBP16.36■□□□□ 0.21
SDHAF3-204ENST00000489852 HEATR3Q7Z4Q2 680 aa16.36■□□□□ 0.21
SDHAF3-204ENST00000489852 ZNF605Q86T29 641 aa16.36■□□□□ 0.21
SDHAF3-204ENST00000489852 MFSD6LQ8IWD5 586 aa16.36■□□□□ 0.21
SDHAF3-204ENST00000489852 RILPL2Q969X0 211 aa16.36■□□□□ 0.21
SDHAF3-204ENST00000489852 TCEAL4Q96EI5 215 aa16.36■□□□□ 0.21
SDHAF3-204ENST00000489852 SLC8A2Q9UPR5 921 aa16.36■□□□□ 0.21
SDHAF3-204ENST00000489852 IPPQ9Y573 584 aa16.36■□□□□ 0.21
SDHAF3-204ENST00000489852 EML5Q05BV3 1969 aa16.36■□□□□ 0.21
SDHAF3-204ENST00000489852 WDR27A2RRH5 827 aa16.35■□□□□ 0.21
SDHAF3-204ENST00000489852 SPECC1L-ADORA2AF8WAN1 911 aa16.35■□□□□ 0.21
SDHAF3-204ENST00000489852 C1QL1O75973 258 aa16.35■□□□□ 0.21
SDHAF3-204ENST00000489852 OR1D2P34982 312 aa16.35■□□□□ 0.21
SDHAF3-204ENST00000489852 GNAQP50148 359 aa16.35■□□□□ 0.21
SDHAF3-204ENST00000489852 CCINQ13939 588 aa16.35■□□□□ 0.21
SDHAF3-204ENST00000489852 PON2Q15165 354 aa16.35■□□□□ 0.21
SDHAF3-204ENST00000489852 TARBP2Q15633 366 aaKnown RBP16.35■□□□□ 0.21
SDHAF3-204ENST00000489852 MTERF2Q49AM1 385 aa16.35■□□□□ 0.21
SDHAF3-204ENST00000489852 PRSS36Q5K4E3 855 aa16.35■□□□□ 0.21
SDHAF3-204ENST00000489852 ZSWIM3Q96MP5 696 aa16.35■□□□□ 0.21
SDHAF3-204ENST00000489852 CORO1BQ9BR76 489 aa16.35■□□□□ 0.21
SDHAF3-204ENST00000489852 IFT122Q9HBG6 1241 aa16.35■□□□□ 0.21
SDHAF3-204ENST00000489852 ZBTB47Q9UFB7 747 aaPredicted RBP16.35■□□□□ 0.21
SDHAF3-204ENST00000489852 RAXQ9Y2V3 346 aa16.35■□□□□ 0.21
SDHAF3-204ENST00000489852 RAI2Q9Y5P3 530 aa16.35■□□□□ 0.21
SDHAF3-204ENST00000489852 PCNX2A6NKB5 2137 aa16.34■□□□□ 0.21
SDHAF3-204ENST00000489852 IGLV3-22A0A075B6J6 115 aa16.34■□□□□ 0.21
SDHAF3-204ENST00000489852 IGKV6-21A0A0C4DH24 114 aa16.34■□□□□ 0.21
SDHAF3-204ENST00000489852 MYBPHLA2RUH7 354 aa16.34■□□□□ 0.21
SDHAF3-204ENST00000489852 WDR64B1ANS9 1081 aa16.34■□□□□ 0.21
SDHAF3-204ENST00000489852 ZNF197O14709 1029 aa16.34■□□□□ 0.21
SDHAF3-204ENST00000489852 DCLK1O15075 740 aa16.34■□□□□ 0.21
SDHAF3-204ENST00000489852 CTHP32929 405 aa16.34■□□□□ 0.21
SDHAF3-204ENST00000489852 HSP90AA2PQ14568 343 aaPredicted RBP16.34■□□□□ 0.21
SDHAF3-204ENST00000489852 PDXDC1Q6P996 788 aa16.34■□□□□ 0.21
SDHAF3-204ENST00000489852 RALGPS2Q86X27 583 aaPredicted RBP16.34■□□□□ 0.21
SDHAF3-204ENST00000489852 YAF2Q8IY57 180 aa16.34■□□□□ 0.21
SDHAF3-204ENST00000489852 HASPINQ8TF76 798 aa16.34■□□□□ 0.21
SDHAF3-204ENST00000489852 UBL7Q96S82 380 aaPredicted RBP16.34■□□□□ 0.21
SDHAF3-204ENST00000489852 RIC8AQ9NPQ8 531 aa16.34■□□□□ 0.21
SDHAF3-204ENST00000489852 HES2Q9Y543 173 aa16.34■□□□□ 0.21
SDHAF3-204ENST00000489852 ASCC3Q8N3C0 2202 aaKnown RBP16.34■□□□□ 0.21
SDHAF3-204ENST00000489852 PATE3B3GLJ2 98 aa16.33■□□□□ 0.2
SDHAF3-204ENST00000489852 TK2O00142 265 aa16.33■□□□□ 0.2
SDHAF3-204ENST00000489852 DDAH1O94760 285 aa16.33■□□□□ 0.2
SDHAF3-204ENST00000489852 MICAL2O94851 1124 aa16.33■□□□□ 0.2
SDHAF3-204ENST00000489852 IRX4P78413 519 aa16.33■□□□□ 0.2
SDHAF3-204ENST00000489852 UGCGQ16739 394 aa16.33■□□□□ 0.2
SDHAF3-204ENST00000489852 PKN3Q6P5Z2 889 aa16.33■□□□□ 0.2
SDHAF3-204ENST00000489852 RAB44Q7Z6P3 723 aaPredicted RBP16.33■□□□□ 0.2
SDHAF3-204ENST00000489852 ZNF654Q8IZM8 581 aa16.33■□□□□ 0.2
SDHAF3-204ENST00000489852 CAMKK1Q8N5S9 505 aa16.33■□□□□ 0.2
SDHAF3-204ENST00000489852 SLC39A7Q92504 469 aa16.33■□□□□ 0.2
SDHAF3-204ENST00000489852 DISC1Q9NRI5 854 aa16.33■□□□□ 0.2
SDHAF3-204ENST00000489852 CACNG4Q9UBN1 327 aa16.33■□□□□ 0.2
SDHAF3-204ENST00000489852 SEPT9Q9UHD8 586 aaPredicted RBP16.33■□□□□ 0.2
SDHAF3-204ENST00000489852 NUP205Q92621 2012 aa16.33■□□□□ 0.2
SDHAF3-204ENST00000489852 ASXL3Q9C0F0 2248 aa16.33■□□□□ 0.2
SDHAF3-204ENST00000489852 HEPACAM2A8MVW5 462 aa16.32■□□□□ 0.2
SDHAF3-204ENST00000489852 CHADO15335 359 aa16.32■□□□□ 0.2
SDHAF3-204ENST00000489852 MEFVO15553 781 aaPredicted RBP16.32■□□□□ 0.2
SDHAF3-204ENST00000489852 ATG13O75143 517 aa16.32■□□□□ 0.2
SDHAF3-204ENST00000489852 LRG1P02750 347 aa16.32■□□□□ 0.2
SDHAF3-204ENST00000489852 KARSQ15046 597 aaKnown RBP16.32■□□□□ 0.2
SDHAF3-204ENST00000489852 PDZD4Q76G19 769 aaPredicted RBP16.32■□□□□ 0.2
SDHAF3-204ENST00000489852 CCDC82Q8N4S0 544 aa16.32■□□□□ 0.2
SDHAF3-204ENST00000489852 TTC8Q8TAM2 541 aa16.32■□□□□ 0.2
SDHAF3-204ENST00000489852 MDM1Q8TC05 714 aa16.32■□□□□ 0.2
SDHAF3-204ENST00000489852 SH2D3AQ9BRG2 576 aa16.32■□□□□ 0.2
SDHAF3-204ENST00000489852 EIF2AQ9BY44 585 aaKnown RBP16.32■□□□□ 0.2
SDHAF3-204ENST00000489852 NIFKQ9BYG3 293 aaKnown RBP16.32■□□□□ 0.2
SDHAF3-204ENST00000489852 GIT1Q9Y2X7 761 aa16.32■□□□□ 0.2
SDHAF3-204ENST00000489852 KALRNO60229 2985 aa16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 NCANO14594 1321 aa16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 GBP1P32455 592 aa16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 CCR2P41597 374 aa16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 SETQ01105 290 aaPredicted RBP16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 SPIRE1Q08AE8 756 aa16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 GRIK3Q13003 919 aa16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 ZNF423Q2M1K9 1284 aa16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 C20orf194Q5TEA3 1177 aa16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 SRGAP1Q7Z6B7 1085 aa16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 RALYLQ86SE5 291 aaKnown RBP16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 PIP4P1Q86T03 277 aa16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 TEX2Q8IWB9 1127 aa16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 GSTCDQ8NEC7 633 aa16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 ZSCAN18Q8TBC5 510 aaPredicted RBP16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 CEP89Q96ST8 783 aa16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 HNRNPABQ99729 332 aaKnown RBP16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 PAAF1Q9BRP4 392 aa16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 MINDY3Q9H8M7 445 aa16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 TRPV4Q9HBA0 871 aa16.31■□□□□ 0.2
SDHAF3-204ENST00000489852 SHROOM3Q8TF72 1996 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms