RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 TMEM8AQ9HCN3 771 aa16.83■□□□□ 0.28
BRD9-208ENST00000489816 CNOT7Q9UIV1 285 aaKnown RBP16.83■□□□□ 0.28
BRD9-208ENST00000489816 EXOC7Q9UPT5 735 aa16.83■□□□□ 0.28
BRD9-208ENST00000489816 SYNGAP1Q96PV0 1343 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 ACTR2P61160 394 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 MTMR3Q13615 1198 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 TMEM132BQ14DG7 1078 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 LONRF1Q17RB8 773 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 TMEM270Q6UE05 265 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 TAX1BP1Q86VP1 789 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 TMEM130Q8N3G9 435 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 MTFR1LQ9H019 292 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 TAOK3Q9H2K8 898 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 DOCK5Q9H7D0 1870 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 GMNCA6NCL1 334 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 CTNND1O60716 968 aaKnown RBP16.82■□□□□ 0.28
BRD9-208ENST00000489816 MAPTP10636 758 aaKnown RBP16.82■□□□□ 0.28
BRD9-208ENST00000489816 CREB1P16220 341 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 JAK3P52333 1124 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 ATP13A4Q4VNC1 1196 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 SGO2Q562F6 1265 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 LRIG3Q6UXM1 1119 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 CPLX4Q7Z7G2 160 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 EFCAB13Q8IY85 973 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 JPH1Q9HDC5 661 aaPredicted RBP16.82■□□□□ 0.28
BRD9-208ENST00000489816 GGT7Q9UJ14 662 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 UMODL1Q5DID0 1318 aa16.82■□□□□ 0.28
BRD9-208ENST00000489816 A0A087WUV0 522 aaPredicted RBP16.81■□□□□ 0.28
BRD9-208ENST00000489816 TTLL13PA6NNM8 815 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 COILP38432 576 aaPredicted RBP16.81■□□□□ 0.28
BRD9-208ENST00000489816 POLGP54098 1239 aaPredicted RBP16.81■□□□□ 0.28
BRD9-208ENST00000489816 FKBP1CQ5VVH2 108 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 KAZNQ674X7 775 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 CEP89Q96ST8 783 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 RASAL2Q9UJF2 1139 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 PI4K2BG5E9Z4 385 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 GRIN3BO60391 1043 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 HMGB2P26583 209 aaKnown RBP16.81■□□□□ 0.28
BRD9-208ENST00000489816 MARK3P27448 753 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 CCND2P30279 289 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 BACE1P56817 501 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 RWDD2BP57060 319 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 MTM1Q13496 603 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 ZBTB33Q86T24 672 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 GPD1LQ8N335 351 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 TAB3Q8N5C8 712 aaPredicted RBP16.81■□□□□ 0.28
BRD9-208ENST00000489816 DDX1Q92499 740 aaKnown RBP16.81■□□□□ 0.28
BRD9-208ENST00000489816 PABPC3Q9H361 631 aaKnown RBP16.81■□□□□ 0.28
BRD9-208ENST00000489816 CTNNAL1Q9UBT7 734 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 TBK1Q9UHD2 729 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 TTC7AQ9ULT0 858 aaPredicted RBP16.81■□□□□ 0.28
BRD9-208ENST00000489816 R3HDM2Q9Y2K5 976 aaKnown RBP16.81■□□□□ 0.28
BRD9-208ENST00000489816 MIF4GDA9UHW6 222 aaKnown RBP16.81■□□□□ 0.28
BRD9-208ENST00000489816 PPFIA2O75334 1257 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 CD58P19256 250 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 PSMC4P43686 418 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 DRP2Q13474 957 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 ALCAMQ13740 583 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 ANGEL2Q5VTE6 544 aaKnown RBP16.81■□□□□ 0.28
BRD9-208ENST00000489816 ARFGAP2Q8N6H7 521 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 ZBTB10Q96DT7 871 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 IWS1Q96ST2 819 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 TCHPQ9BT92 498 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 A1CFQ9NQ94 594 aaKnown RBP16.81■□□□□ 0.28
BRD9-208ENST00000489816 CYP26B1Q9NR63 512 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 C1orf112Q9NSG2 853 aa16.81■□□□□ 0.28
BRD9-208ENST00000489816 RBBP6Q7Z6E9 1792 aaKnown RBP16.81■□□□□ 0.28
BRD9-208ENST00000489816 RGS16O15492 202 aaPredicted RBP16.8■□□□□ 0.28
BRD9-208ENST00000489816 CHN1P15882 459 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 KCNA2P16389 499 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 PIK3CAP42336 1068 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 OSTNP61366 133 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 MYBPC2Q14324 1141 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 C11orf63Q6NUN7 778 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 SEC14L1Q92503 715 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 MRRFQ96E11 262 aaKnown RBP16.8■□□□□ 0.28
BRD9-208ENST00000489816 HAPLN2Q9GZV7 340 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 PICK1Q9NRD5 415 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 PIM2Q9P1W9 311 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 SLC9A2Q9UBY0 812 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 DDX20Q9UHI6 824 aaKnown RBP16.8■□□□□ 0.28
BRD9-208ENST00000489816 MEFVO15553 781 aaPredicted RBP16.8■□□□□ 0.28
BRD9-208ENST00000489816 FAM107AO95990 144 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 HLA-DRAP01903 254 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 SFNP31947 248 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 CHRNA3P32297 505 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 KRT17Q04695 432 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 SF3B2Q13435 895 aaKnown RBP16.8■□□□□ 0.28
BRD9-208ENST00000489816 ACAD10Q6JQN1 1059 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 CAPN12Q6ZSI9 719 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 B4GALNT4Q76KP1 1039 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 CNKSR2Q8WXI2 1034 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 IFT74Q96LB3 600 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 ANKEF1Q9NU02 776 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 FBXO40Q9UH90 709 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 MTUS1Q9ULD2 1270 aa16.8■□□□□ 0.28
BRD9-208ENST00000489816 ZNF646O15015 1829 aaPredicted RBP16.79■□□□□ 0.28
BRD9-208ENST00000489816 LYPLA2O95372 231 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 GZMAP12544 262 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 RFX1P22670 979 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms