RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 LMBRD2Q68DH5 695 aaPredicted RBP22.61■■□□□ 1.21
SND1-214ENST00000489417 SV2AQ7L0J3 742 aa22.61■■□□□ 1.21
SND1-214ENST00000489417 WDR49Q8IV35 697 aa22.61■■□□□ 1.21
SND1-214ENST00000489417 ZNF397Q8NF99 534 aaPredicted RBP22.61■■□□□ 1.21
SND1-214ENST00000489417 CCDC94Q9BW85 323 aaPredicted RBP22.61■■□□□ 1.21
SND1-214ENST00000489417 COQ4Q9Y3A0 265 aa22.61■■□□□ 1.21
SND1-214ENST00000489417 PTPRJQ12913 1337 aa22.61■■□□□ 1.21
SND1-214ENST00000489417 GPR182O15218 404 aa22.6■■□□□ 1.21
SND1-214ENST00000489417 NRDCO43847 1150 aa22.6■■□□□ 1.21
SND1-214ENST00000489417 AP3M2P53677 418 aa22.6■■□□□ 1.21
SND1-214ENST00000489417 CCZ1BP86790 482 aa22.6■■□□□ 1.21
SND1-214ENST00000489417 CCZ1P86791 482 aaPredicted RBP22.6■■□□□ 1.21
SND1-214ENST00000489417 UBXN11Q5T124 520 aa22.6■■□□□ 1.21
SND1-214ENST00000489417 C15orf39Q6ZRI6 1047 aa22.6■■□□□ 1.21
SND1-214ENST00000489417 CACNA2D4Q7Z3S7 1137 aa22.6■■□□□ 1.21
SND1-214ENST00000489417 CCDC112Q8NEF3 446 aa22.6■■□□□ 1.21
SND1-214ENST00000489417 LMO3Q8TAP4 145 aa22.6■■□□□ 1.21
SND1-214ENST00000489417 ACAP3Q96P50 834 aa22.6■■□□□ 1.21
SND1-214ENST00000489417 TRIM6Q9C030 488 aaPredicted RBP22.6■■□□□ 1.21
SND1-214ENST00000489417 ERVK-5Q9HDB9 667 aa22.6■■□□□ 1.21
SND1-214ENST00000489417 ABHD10Q9NUJ1 306 aa22.6■■□□□ 1.21
SND1-214ENST00000489417 MROH7Q68CQ1 1323 aa22.6■■□□□ 1.21
SND1-214ENST00000489417 CD4P01730 458 aa22.59■■□□□ 1.21
SND1-214ENST00000489417 C4BPAP04003 597 aaKnown RBP22.59■■□□□ 1.21
SND1-214ENST00000489417 GHRP10912 638 aa22.59■■□□□ 1.21
SND1-214ENST00000489417 GJA8P48165 433 aa22.59■■□□□ 1.21
SND1-214ENST00000489417 POLR2FP61218 127 aaKnown RBP22.59■■□□□ 1.21
SND1-214ENST00000489417 NFX1Q12986 1120 aaKnown RBP22.59■■□□□ 1.21
SND1-214ENST00000489417 LPIN1Q14693 890 aa22.59■■□□□ 1.21
SND1-214ENST00000489417 ZACNQ401N2 412 aa22.59■■□□□ 1.21
SND1-214ENST00000489417 FBXL13Q8NEE6 735 aa22.59■■□□□ 1.21
SND1-214ENST00000489417 OR8K1Q8NGG5 319 aa22.59■■□□□ 1.21
SND1-214ENST00000489417 CAGE1Q8TC20 777 aa22.59■■□□□ 1.21
SND1-214ENST00000489417 BAP1Q92560 729 aa22.59■■□□□ 1.21
SND1-214ENST00000489417 FAM84AQ96KN4 292 aa22.59■■□□□ 1.21
SND1-214ENST00000489417 DNAJC7Q99615 494 aa22.59■■□□□ 1.21
SND1-214ENST00000489417 AGO3Q9H9G7 860 aaKnown RBP22.59■■□□□ 1.21
SND1-214ENST00000489417 SQORQ9Y6N5 450 aa22.59■■□□□ 1.21
SND1-214ENST00000489417 LACTBL1A8MY62 500 aa22.58■■□□□ 1.21
SND1-214ENST00000489417 TLR3O15455 904 aaKnown RBP22.58■■□□□ 1.21
SND1-214ENST00000489417 UCHL3P15374 230 aa22.58■■□□□ 1.21
SND1-214ENST00000489417 PAK2Q13177 524 aa22.58■■□□□ 1.21
SND1-214ENST00000489417 SLC10A6Q3KNW5 377 aa22.58■■□□□ 1.21
SND1-214ENST00000489417 TDRD10Q5VZ19 366 aaKnown RBP22.58■■□□□ 1.21
SND1-214ENST00000489417 TRAF7Q6Q0C0 670 aa22.58■■□□□ 1.21
SND1-214ENST00000489417 SLC39A5Q6ZMH5 540 aa22.58■■□□□ 1.21
SND1-214ENST00000489417 ANKLE1Q8NAG6 615 aa22.58■■□□□ 1.21
SND1-214ENST00000489417 USP38Q8NB14 1042 aa22.58■■□□□ 1.21
SND1-214ENST00000489417 OR5B17Q8NGF7 314 aa22.58■■□□□ 1.21
SND1-214ENST00000489417 TAS1R2Q8TE23 839 aa22.58■■□□□ 1.21
SND1-214ENST00000489417 TMX1Q9H3N1 280 aa22.58■■□□□ 1.21
SND1-214ENST00000489417 NLRC4Q9NPP4 1024 aa22.58■■□□□ 1.21
SND1-214ENST00000489417 CHST12Q9NRB3 414 aa22.58■■□□□ 1.21
SND1-214ENST00000489417 FBXL5Q9UKA1 691 aa22.58■■□□□ 1.21
SND1-214ENST00000489417 ZKSCAN5Q9Y2L8 839 aa22.58■■□□□ 1.21
SND1-214ENST00000489417 DAAM1Q9Y4D1 1078 aa22.58■■□□□ 1.21
SND1-214ENST00000489417 FHOD1Q9Y613 1164 aa22.58■■□□□ 1.21
SND1-214ENST00000489417 MEFVO15553 781 aaPredicted RBP22.57■■□□□ 1.2
SND1-214ENST00000489417 SKILP12757 684 aa22.57■■□□□ 1.2
SND1-214ENST00000489417 CD52P31358 61 aa22.57■■□□□ 1.2
SND1-214ENST00000489417 BIRC3Q13489 604 aa22.57■■□□□ 1.2
SND1-214ENST00000489417 BFSP2Q13515 415 aa22.57■■□□□ 1.2
SND1-214ENST00000489417 TWF2Q6IBS0 349 aaKnown RBP22.57■■□□□ 1.2
SND1-214ENST00000489417 PDXDC1Q6P996 788 aa22.57■■□□□ 1.2
SND1-214ENST00000489417 SEMA4DQ92854 862 aa22.57■■□□□ 1.2
SND1-214ENST00000489417 BAG1Q99933 345 aaPredicted RBP22.57■■□□□ 1.2
SND1-214ENST00000489417 OSBPL7Q9BZF2 842 aa22.57■■□□□ 1.2
SND1-214ENST00000489417 ASB7Q9H672 318 aa22.57■■□□□ 1.2
SND1-214ENST00000489417 RAB20Q9NX57 234 aa22.57■■□□□ 1.2
SND1-214ENST00000489417 SNTG2Q9NY99 539 aa22.57■■□□□ 1.2
SND1-214ENST00000489417 PADI3Q9ULW8 664 aa22.57■■□□□ 1.2
SND1-214ENST00000489417 CENPFP49454 3210 aa22.57■■□□□ 1.2
SND1-214ENST00000489417 COL6A1P12109 1028 aa22.57■■□□□ 1.2
SND1-214ENST00000489417 ATN1P54259 1190 aaPredicted RBP22.57■■□□□ 1.2
SND1-214ENST00000489417 DUOXA2Q1HG44 320 aa22.57■■□□□ 1.2
SND1-214ENST00000489417 TSR1Q2NL82 804 aaKnown RBP22.57■■□□□ 1.2
SND1-214ENST00000489417 RRAGAQ7L523 313 aa22.57■■□□□ 1.2
SND1-214ENST00000489417 TMEM139Q8IV31 216 aa22.57■■□□□ 1.2
SND1-214ENST00000489417 CD302Q8IX05 232 aa22.57■■□□□ 1.2
SND1-214ENST00000489417 EFCAB13Q8IY85 973 aa22.57■■□□□ 1.2
SND1-214ENST00000489417 DIS3LQ8TF46 1054 aaKnown RBP22.57■■□□□ 1.2
SND1-214ENST00000489417 NXF3Q9H4D5 531 aaKnown RBP22.57■■□□□ 1.2
SND1-214ENST00000489417 APEX2Q9UBZ4 518 aa22.57■■□□□ 1.2
SND1-214ENST00000489417 PQBP1O60828 265 aaKnown RBP22.56■■□□□ 1.2
SND1-214ENST00000489417 HLA-DRAP01903 254 aa22.56■■□□□ 1.2
SND1-214ENST00000489417 TMEM191BP0C7N4 346 aa22.56■■□□□ 1.2
SND1-214ENST00000489417 SELPP16109 830 aa22.56■■□□□ 1.2
SND1-214ENST00000489417 FECHP22830 423 aa22.56■■□□□ 1.2
SND1-214ENST00000489417 PIK3CAP42336 1068 aa22.56■■□□□ 1.2
SND1-214ENST00000489417 YARSP54577 528 aaKnown RBP22.56■■□□□ 1.2
SND1-214ENST00000489417 TFAMQ00059 246 aaKnown RBP22.56■■□□□ 1.2
SND1-214ENST00000489417 IQCEQ6IPM2 695 aa22.56■■□□□ 1.2
SND1-214ENST00000489417 GJB7Q6PEY0 223 aa22.56■■□□□ 1.2
SND1-214ENST00000489417 ANKRD33Q7Z3H0 272 aa22.56■■□□□ 1.2
SND1-214ENST00000489417 ANKRD36BP1Q96IX9 119 aa22.56■■□□□ 1.2
SND1-214ENST00000489417 NAA15Q9BXJ9 866 aaKnown RBP22.56■■□□□ 1.2
SND1-214ENST00000489417 MTMR12Q9C0I1 747 aa22.56■■□□□ 1.2
SND1-214ENST00000489417 NUCKS1Q9H1E3 243 aaKnown RBP22.56■■□□□ 1.2
SND1-214ENST00000489417 PLEKHA5Q9HAU0 1116 aa22.56■■□□□ 1.2
SND1-214ENST00000489417 LRRC53A6NM62 1247 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms