RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 RIC8AQ9NPQ8 531 aa10.32□□□□□ -0.76
SSBP1-212ENST00000489378 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.32□□□□□ -0.766e-9■■□□□ 11.4
SSBP1-212ENST00000489378 NRBP2Q9NSY0 501 aa10.32□□□□□ -0.76
SSBP1-212ENST00000489378 CNTNAP2Q9UHC6 1331 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 IGSF10Q6WRI0 2623 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 COL4A2P08572 1712 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 TMEM150BA6NC51 233 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 TMEM8BA6NDV4 472 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 E7EWF7 191 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 K7ESF4 209 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 MAN2B1O00754 1011 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 FOSP01100 380 aaPredicted RBP10.31□□□□□ -0.76
SSBP1-212ENST00000489378 C8AP07357 584 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 ZNF806P0C7X5 589 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 CNR2P34972 360 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 GRM2Q14416 872 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 TARBP2Q15633 366 aaKnown RBP10.31□□□□□ -0.76
SSBP1-212ENST00000489378 USP41Q3LFD5 358 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 ZNF787Q6DD87 383 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 TANGO2Q6ICL3 276 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 FUT10Q6P4F1 479 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 CEP68Q76N32 757 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 LONP2Q86WA8 852 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 NCOA7Q8NI08 942 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 DNASE1L2Q92874 299 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 MCRS1Q96EZ8 462 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 LNPKQ9C0E8 428 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 SMOC1Q9H4F8 434 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 TBC1D22BQ9NU19 505 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 AGPAT5Q9NUQ2 364 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 C2orf42Q9NWW7 574 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 MIOSQ9NXC5 875 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 SAMM50Q9Y512 469 aa10.31□□□□□ -0.76
SSBP1-212ENST00000489378 TDRD15B5MCY1 1934 aaKnown RBP10.3□□□□□ -0.76
SSBP1-212ENST00000489378 TICRRQ7Z2Z1 1910 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 ARL5CA6NH57 179 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 XYLBO75191 536 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 CHRNB1P11230 501 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 NOVA1P51513 510 aaKnown RBP10.3□□□□□ -0.76
SSBP1-212ENST00000489378 ADCY7P51828 1080 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 NAPAP54920 295 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 RTP2Q5QGT7 225 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 LIN9Q5TKA1 542 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 ZNF410Q86VK4 478 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 RHPN2Q8IUC4 686 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 MB21D2Q8IYB1 491 aaPredicted RBP10.3□□□□□ -0.76
SSBP1-212ENST00000489378 SMG8Q8ND04 991 aaKnown RBP10.3□□□□□ -0.76
SSBP1-212ENST00000489378 FAM3CQ92520 227 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 RABGGTAQ92696 567 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 ZFP42Q96MM3 310 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 NLRP4Q96MN2 994 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 CEP89Q96ST8 783 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 GAD1Q99259 594 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 CLSTN3Q9BQT9 956 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 SH2D3AQ9BRG2 576 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 INO80BQ9C086 356 aaPredicted RBP10.3□□□□□ -0.76
SSBP1-212ENST00000489378 SUCLA2Q9P2R7 463 aaPredicted RBP10.3□□□□□ -0.76
SSBP1-212ENST00000489378 DNMT3BQ9UBC3 853 aaKnown RBP10.3□□□□□ -0.76
SSBP1-212ENST00000489378 TCEAL9Q9UHQ7 104 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 LAMA5O15230 3695 aa10.3□□□□□ -0.76
SSBP1-212ENST00000489378 IGKV6-21A0A0C4DH24 114 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 ADAM12O43184 909 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 FCARP24071 287 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 HOXA9P31269 272 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 HOXA11P31270 313 aaPredicted RBP10.29□□□□□ -0.76
SSBP1-212ENST00000489378 MLH1P40692 756 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 CLK2P49760 499 aaKnown RBP10.29□□□□□ -0.76
SSBP1-212ENST00000489378 SCNN1GP51170 649 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 CDC42EP1Q00587 391 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 ZNF252P-AS1Q0IIN9 211 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 SLC5A9Q2M3M2 681 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 MTERF2Q49AM1 385 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 PABPC1LQ4VXU2 614 aaKnown RBP10.29□□□□□ -0.76
SSBP1-212ENST00000489378 SOWAHCQ53LP3 525 aaPredicted RBP10.29□□□□□ -0.76
SSBP1-212ENST00000489378 TMTC3Q6ZXV5 915 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 GPR65Q8IYL9 337 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 SPEM1Q8N4L4 309 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 SLC7A14Q8TBB6 771 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 CRYGNQ8WXF5 182 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 THAP11Q96EK4 314 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 COLEC11Q9BWP8 271 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 BRD9Q9H8M2 597 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 IFT122Q9HBG6 1241 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 CACNG4Q9UBN1 327 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 KCNH3Q9ULD8 1083 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 MRPS23Q9Y3D9 190 aaKnown RBP10.29□□□□□ -0.76
SSBP1-212ENST00000489378 NAV2Q8IVL1 2488 aa10.29□□□□□ -0.76
SSBP1-212ENST00000489378 WDR64B1ANS9 1081 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 HIP1O00291 1037 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 ADAMTS3O15072 1205 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 DGAT1O75907 488 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 EPN2O95208 641 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 STBD1O95210 358 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 CYP3A4P08684 503 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 ITGA4P13612 1032 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 CEBPBP17676 345 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 CREMQ03060 361 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 PTH1RQ03431 593 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 AP3B2Q13367 1082 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 JAKMIP3Q5VZ66 844 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms