RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 PANK4Q9NVE7 773 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 MARCH5Q9NX47 278 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 ADAM28Q9UKQ2 775 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 EXOC7Q9UPT5 735 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 REV3LO60673 3130 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 POLR2DO15514 142 aaKnown RBP15.6■□□□□ 0.09
BRCA1-218ENST00000489037 TBX10O75333 385 aa15.6■□□□□ 0.09
BRCA1-218ENST00000489037 PIGRP01833 764 aa15.6■□□□□ 0.09
BRCA1-218ENST00000489037 CLTAP09496 248 aa15.6■□□□□ 0.09
BRCA1-218ENST00000489037 GLUD2P49448 558 aa15.6■□□□□ 0.09
BRCA1-218ENST00000489037 DLX2Q07687 328 aaPredicted RBP15.6■□□□□ 0.09
BRCA1-218ENST00000489037 ELAVL2Q12926 359 aaKnown RBP15.6■□□□□ 0.09
BRCA1-218ENST00000489037 SMAD4Q13485 552 aaKnown RBP15.6■□□□□ 0.09
BRCA1-218ENST00000489037 ALCAMQ13740 583 aa15.6■□□□□ 0.09
BRCA1-218ENST00000489037 USP41Q3LFD5 358 aa15.6■□□□□ 0.09
BRCA1-218ENST00000489037 GLRA4Q5JXX5 417 aa15.6■□□□□ 0.09
BRCA1-218ENST00000489037 AXDND1Q5T1B0 1012 aaPredicted RBP15.6■□□□□ 0.09
BRCA1-218ENST00000489037 SLFN12LQ6IEE8 588 aa15.6■□□□□ 0.09
BRCA1-218ENST00000489037 FUT10Q6P4F1 479 aa15.6■□□□□ 0.09
BRCA1-218ENST00000489037 ZNF720Q7Z2F6 126 aa15.6■□□□□ 0.09
BRCA1-218ENST00000489037 AUTS2Q8WXX7 1259 aa15.6■□□□□ 0.09
BRCA1-218ENST00000489037 DNAJC19Q96DA6 116 aa15.6■□□□□ 0.09
BRCA1-218ENST00000489037 BARX2Q9UMQ3 279 aaPredicted RBP15.6■□□□□ 0.09
BRCA1-218ENST00000489037 PCDHB13Q9Y5F0 798 aa15.6■□□□□ 0.09
BRCA1-218ENST00000489037 TTC28Q96AY4 2481 aa15.6■□□□□ 0.09
BRCA1-218ENST00000489037 SF3B1O75533 1304 aaKnown RBP eCLIP15.6■□□□□ 0.092e-9■■■■■ 90.5
BRCA1-218ENST00000489037 PDCD11Q14690 1871 aaKnown RBP15.59■□□□□ 0.09
BRCA1-218ENST00000489037 SMIM28A0A1B0GU29 152 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 SPDYE4A6NLX3 237 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 C2CD2LO14523 706 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 ABLIM1O14639 778 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 CLASP2O75122 1294 aaKnown RBP15.59■□□□□ 0.09
BRCA1-218ENST00000489037 GCNT3O95395 438 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 HOXB8P17481 243 aaPredicted RBP15.59■□□□□ 0.09
BRCA1-218ENST00000489037 KLRC2P26717 231 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 NUCB2P80303 420 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 COASYQ13057 564 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 PTPN14Q15678 1187 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 TPRNQ4KMQ1 711 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 ZC2HC1CQ53FD0 456 aaPredicted RBP15.59■□□□□ 0.09
BRCA1-218ENST00000489037 RESP18Q5W5W9 173 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 ELMSAN1Q6PJG2 1045 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 TMEM184AQ6ZMB5 413 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 STXBP4Q6ZWJ1 553 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 MAP4K3Q8IVH8 894 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 CEP57L1Q8IYX8 460 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 RABGGTAQ92696 567 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 STAMQ92783 540 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 DDX27Q96GQ7 796 aaKnown RBP15.59■□□□□ 0.09
BRCA1-218ENST00000489037 SNX27Q96L92 541 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 PPP1R10Q96QC0 940 aaKnown RBP15.59■□□□□ 0.09
BRCA1-218ENST00000489037 ACCSQ96QU6 501 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 MSTO1Q9BUK6 570 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 VN1R3Q9BXE9 311 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 SCAND2PQ9GZW5 306 aaPredicted RBP15.59■□□□□ 0.09
BRCA1-218ENST00000489037 PLEKHA5Q9HAU0 1116 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 KBTBD4Q9NVX7 518 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 TBC1D7Q9P0N9 293 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 CLEC1BQ9P126 229 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 ZDHHC9Q9Y397 364 aa15.59■□□□□ 0.09
BRCA1-218ENST00000489037 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.59■□□□□ 0.09
BRCA1-218ENST00000489037 TNFRSF10AO00220 468 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 OGTO15294 1046 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 MBTPS2O43462 519 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 XPOTO43592 962 aaKnown RBP15.58■□□□□ 0.08
BRCA1-218ENST00000489037 TRAPPC3O43617 180 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 GLP2RO95838 553 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 ADH1AP07327 375 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 IL9P15248 144 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 KCNE1P15382 129 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 CREMQ03060 361 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 POSTNQ15063 836 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 E2F4Q16254 413 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 XKR4Q5GH76 650 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 ANKRD54Q6NXT1 300 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 DCLRE1AQ6PJP8 1040 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 ALKAL1Q6UXT8 129 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 SYCP3Q8IZU3 236 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 LEO1Q8WVC0 666 aaPredicted RBP15.58■□□□□ 0.08
BRCA1-218ENST00000489037 MSLNLQ96KJ4 702 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 KLHL5Q96PQ7 755 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 FIZ1Q96SL8 496 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 RPF1Q9H9Y2 349 aaKnown RBP15.58■□□□□ 0.08
BRCA1-218ENST00000489037 OLFML3Q9NRN5 406 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.58■□□□□ 0.08
BRCA1-218ENST00000489037 DZANK1Q9NVP4 752 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 CNTN3Q9P232 1028 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 DPP7Q9UHL4 492 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 KCNH3Q9ULD8 1083 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 HCFC2Q9Y5Z7 792 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 A0A0C4DFX4 3053 aa15.58■□□□□ 0.08
BRCA1-218ENST00000489037 MTCL1Q9Y4B5 1905 aaKnown RBP15.57■□□□□ 0.08
BRCA1-218ENST00000489037 B3GAT3O94766 335 aa15.57■□□□□ 0.08
BRCA1-218ENST00000489037 ASIC1P78348 528 aa15.57■□□□□ 0.08
BRCA1-218ENST00000489037 DSG1Q02413 1049 aa15.57■□□□□ 0.08
BRCA1-218ENST00000489037 PPP2R3AQ06190 1150 aa15.57■□□□□ 0.08
BRCA1-218ENST00000489037 NAB2Q15742 525 aa15.57■□□□□ 0.08
BRCA1-218ENST00000489037 SEZ6Q53EL9 994 aa15.57■□□□□ 0.08
BRCA1-218ENST00000489037 L1TD1Q5T7N2 865 aaKnown RBP15.57■□□□□ 0.08
BRCA1-218ENST00000489037 ADALQ6DHV7 355 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms