RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 SLC1A4P43007 532 aa9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 HERVK_113P62684 666 aa9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 IKQ13123 557 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 WTAPQ15007 396 aa9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 TMEM67Q5HYA8 995 aa9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 FAM83BQ5T0W9 1011 aa9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 SLC23A3Q6PIS1 610 aa9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 JAZF1Q86VZ6 243 aa9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 CCAR1Q8IX12 1150 aaKnown RBP9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 TMTC2Q8N394 836 aa9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 DCAF4Q8WV16 495 aa9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 ASB2Q96Q27 587 aa9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 UHRF1Q96T88 793 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 TMEM47Q9BQJ4 181 aa9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 MTA3Q9BTC8 594 aa9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 UPF2Q9HAU5 1272 aaKnown RBP9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 PRC1O43663 620 aa9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 HYAL3O43820 417 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 FUT4P22083 530 aa9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 GRIA2P42262 883 aa9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 NOVP48745 357 aa9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 FAM110CQ1W6H9 321 aa9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 CCDC96Q2M329 555 aa9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 RCSD1Q6JBY9 416 aa9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 CYP2R1Q6VVX0 501 aa9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 NFXL1Q6ZNB6 911 aa9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 STOX1Q6ZVD7 989 aa9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 CATIPQ7Z7H3 387 aa9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 MB21D2Q8IYB1 491 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 ENAHQ8N8S7 591 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 CHURC1Q8WUH1 139 aa9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 ANKS1AQ92625 1134 aa9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 FCRL2Q96LA5 508 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 P2RX7Q99572 595 aaKnown RBP9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 DHRS4Q9BTZ2 278 aa9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 THEGQ9P2T0 379 aa9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 TMEM59LQ9UK28 342 aa9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 FEM1BQ9UK73 627 aa9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 MYH4Q9Y623 1939 aa9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 CDH23Q9H251 3354 aa9.28□□□□□ -0.92
TRAPPC12-221ENST00000489032 LTBP2Q14767 1821 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 CCDC69A6NI79 296 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 PAMP19021 973 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 STAT2P52630 851 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 GFRA1P56159 465 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 CCNA1P78396 465 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 MRPS5P82675 430 aaKnown RBP9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 RTP2Q5QGT7 225 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 C9orf50Q5SZB4 431 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 MAP3K21Q5TCX8 1036 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 HLA-DQA1Q5Y7H0 255 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 SDE2Q6IQ49 451 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 BLOC1S2Q6QNY1 142 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 SYNE3Q6ZMZ3 975 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 CYB5R4Q7L1T6 521 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 CHST3Q7LGC8 479 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 FAM160B2Q86V87 743 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 MB21D1Q8N884 522 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 PRPF38AQ8NAV1 312 aaKnown RBP9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 GPRC5AQ8NFJ5 357 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 TRIB2Q92519 343 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 JAKMIP1Q96N16 626 aaKnown RBP9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 SLF1Q9BQI6 1058 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 MCMBPQ9BTE3 642 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 PAGR1Q9BTK6 254 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 ADAMTS10Q9H324 1103 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 GPRC5CQ9NQ84 441 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 PRDM7Q9NQW5 492 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 FANCLQ9NW38 375 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 SNX14Q9Y5W7 946 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 TAF6LQ9Y6J9 622 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 WDR19Q8NEZ3 1342 aa9.27□□□□□ -0.93
TRAPPC12-221ENST00000489032 NPHP3-ACAD11A0A0J9YXS1 232 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 ESYT3A0FGR9 886 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 TMEM82A0PJX8 343 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 TMEM232C9JQI7 657 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 FGF10O15520 208 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 ZBED4O75132 1171 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 L1CAMP32004 1257 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 HK2P52789 917 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 ANAPC15P60006 121 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 SUMO1P63165 101 aaKnown RBP9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 MAP4K2Q12851 820 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 SEC23AQ15436 765 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 SF1Q15637 639 aaKnown RBP9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 ASPRV1Q53RT3 343 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 FAM209AQ5JX71 171 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 KIAA1755Q5JYT7 1200 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 GPATCH4Q5T3I0 446 aaKnown RBP9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 YOD1Q5VVQ6 348 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 IQCEQ6IPM2 695 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 ZPBP2Q6X784 338 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 LBX2Q6XYB7 198 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 KCTD1Q719H9 257 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 JAMLQ86YT9 394 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 SPPL2CQ8IUH8 684 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 OXR1Q8N573 874 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 TMEM145Q8NBT3 493 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 COPS5Q92905 334 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 CHMP4CQ96CF2 233 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms