RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 PRR23AA6NEV1 266 aa20.31■□□□□ 0.84
HDAC6-231ENST00000488905 SRFP11831 508 aa20.31■□□□□ 0.84
HDAC6-231ENST00000488905 DCAF4L1Q3SXM0 396 aa20.31■□□□□ 0.84
HDAC6-231ENST00000488905 FAM171A1Q5VUB5 890 aa20.31■□□□□ 0.84
HDAC6-231ENST00000488905 EEF1DP3Q658K8 133 aa20.31■□□□□ 0.84
HDAC6-231ENST00000488905 CLSTN3Q9BQT9 956 aa20.31■□□□□ 0.84
HDAC6-231ENST00000488905 KRBA1A5PL33 1030 aa20.3■□□□□ 0.84
HDAC6-231ENST00000488905 SEC24BO95487 1268 aa20.3■□□□□ 0.84
HDAC6-231ENST00000488905 LAMP2P13473 410 aa20.3■□□□□ 0.84
HDAC6-231ENST00000488905 FXR2P51116 673 aaKnown RBP eCLIP20.3■□□□□ 0.84
HDAC6-231ENST00000488905 ELAVL2Q12926 359 aaKnown RBP20.3■□□□□ 0.84
HDAC6-231ENST00000488905 LIN9Q5TKA1 542 aa20.3■□□□□ 0.84
HDAC6-231ENST00000488905 CEP57Q86XR8 500 aa20.3■□□□□ 0.84
HDAC6-231ENST00000488905 SLC44A3Q8N4M1 653 aa20.3■□□□□ 0.84
HDAC6-231ENST00000488905 FBXO18Q8NFZ0 1043 aa20.3■□□□□ 0.84
HDAC6-231ENST00000488905 LNX1Q8TBB1 728 aaPredicted RBP20.3■□□□□ 0.84
HDAC6-231ENST00000488905 IFT74Q96LB3 600 aa20.3■□□□□ 0.84
HDAC6-231ENST00000488905 GDAQ9Y2T3 454 aa20.3■□□□□ 0.84
HDAC6-231ENST00000488905 FANCMQ8IYD8 2048 aa20.29■□□□□ 0.84
HDAC6-231ENST00000488905 CCT6AP40227 531 aaKnown RBP20.29■□□□□ 0.84
HDAC6-231ENST00000488905 TRAPPC10P48553 1259 aa20.29■□□□□ 0.84
HDAC6-231ENST00000488905 EFNA5P52803 228 aa20.29■□□□□ 0.84
HDAC6-231ENST00000488905 HMGN5P82970 282 aaKnown RBP20.29■□□□□ 0.84
HDAC6-231ENST00000488905 HTR4Q13639 388 aa20.29■□□□□ 0.84
HDAC6-231ENST00000488905 GNL2Q13823 731 aaKnown RBP20.29■□□□□ 0.84
HDAC6-231ENST00000488905 ECM1Q16610 540 aa20.29■□□□□ 0.84
HDAC6-231ENST00000488905 PDXDC1Q6P996 788 aa20.29■□□□□ 0.84
HDAC6-231ENST00000488905 FRMD5Q7Z6J6 570 aa20.29■□□□□ 0.84
HDAC6-231ENST00000488905 KIFAP3Q92845 792 aa20.29■□□□□ 0.84
HDAC6-231ENST00000488905 BHMT2Q9H2M3 363 aa20.29■□□□□ 0.84
HDAC6-231ENST00000488905 CA14Q9ULX7 337 aa20.29■□□□□ 0.84
HDAC6-231ENST00000488905 DMXL1Q9Y485 3027 aa20.29■□□□□ 0.84
HDAC6-231ENST00000488905 ANHXE9PGG2 379 aa20.28■□□□□ 0.84
HDAC6-231ENST00000488905 TMEM189-UBE2V1I3L0A0 370 aa20.28■□□□□ 0.84
HDAC6-231ENST00000488905 C8AP07357 584 aa20.28■□□□□ 0.84
HDAC6-231ENST00000488905 HNRNPA1P09651 372 aaKnown RBP eCLIP20.28■□□□□ 0.84
HDAC6-231ENST00000488905 RFX1P22670 979 aa20.28■□□□□ 0.84
HDAC6-231ENST00000488905 FSHRP23945 695 aa20.28■□□□□ 0.84
HDAC6-231ENST00000488905 HOXA9P31269 272 aa20.28■□□□□ 0.84
HDAC6-231ENST00000488905 RBM25P49756 843 aaKnown RBP20.28■□□□□ 0.84
HDAC6-231ENST00000488905 NBR1Q14596 966 aa20.28■□□□□ 0.84
HDAC6-231ENST00000488905 ANGPT1Q15389 498 aa20.28■□□□□ 0.84
HDAC6-231ENST00000488905 ATF7IP2Q5U623 682 aa20.28■□□□□ 0.84
HDAC6-231ENST00000488905 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.28■□□□□ 0.84
HDAC6-231ENST00000488905 GRASPQ7Z6J2 395 aaPredicted RBP20.28■□□□□ 0.84
HDAC6-231ENST00000488905 DTWD2Q8NBA8 298 aa20.28■□□□□ 0.84
HDAC6-231ENST00000488905 DAXXQ9UER7 740 aaPredicted RBP20.28■□□□□ 0.84
HDAC6-231ENST00000488905 NOL7Q9UMY1 257 aaKnown RBP20.28■□□□□ 0.84
HDAC6-231ENST00000488905 NUMBLQ9Y6R0 609 aa20.28■□□□□ 0.84
HDAC6-231ENST00000488905 ZNF292O60281 2723 aa20.28■□□□□ 0.84
HDAC6-231ENST00000488905 ADAM12O43184 909 aa20.27■□□□□ 0.84
HDAC6-231ENST00000488905 GLRA4Q5JXX5 417 aa20.27■□□□□ 0.84
HDAC6-231ENST00000488905 PPM1LQ5SGD2 360 aa20.27■□□□□ 0.84
HDAC6-231ENST00000488905 NT5DC1Q5TFE4 455 aa20.27■□□□□ 0.84
HDAC6-231ENST00000488905 ERICH6BQ5W0A0 696 aa20.27■□□□□ 0.84
HDAC6-231ENST00000488905 C4orf32Q8N8J7 132 aa20.27■□□□□ 0.84
HDAC6-231ENST00000488905 FAM184AQ8NB25 1140 aa20.27■□□□□ 0.84
HDAC6-231ENST00000488905 GPR152Q8TDT2 470 aa20.27■□□□□ 0.84
HDAC6-231ENST00000488905 NKD2Q969F2 451 aaPredicted RBP20.27■□□□□ 0.84
HDAC6-231ENST00000488905 PPP1R10Q96QC0 940 aaKnown RBP20.27■□□□□ 0.84
HDAC6-231ENST00000488905 TBC1D17Q9HA65 648 aa20.27■□□□□ 0.84
HDAC6-231ENST00000488905 POLD4Q9HCU8 107 aa20.27■□□□□ 0.84
HDAC6-231ENST00000488905 DDX19AQ9NUU7 478 aaKnown RBP20.27■□□□□ 0.84
HDAC6-231ENST00000488905 LRWD1Q9UFC0 647 aa20.27■□□□□ 0.84
HDAC6-231ENST00000488905 ZFP37Q9Y6Q3 630 aaPredicted RBP20.27■□□□□ 0.84
HDAC6-231ENST00000488905 PHLPP2Q6ZVD8 1323 aa20.27■□□□□ 0.83
HDAC6-231ENST00000488905 STK25O00506 426 aa20.26■□□□□ 0.83
HDAC6-231ENST00000488905 APBB1IPQ7Z5R6 666 aaPredicted RBP20.26■□□□□ 0.83
HDAC6-231ENST00000488905 SNX29Q8TEQ0 813 aa20.26■□□□□ 0.83
HDAC6-231ENST00000488905 ARHGEF3Q9NR81 526 aa20.26■□□□□ 0.83
HDAC6-231ENST00000488905 MTRRQ9UBK8 725 aa20.26■□□□□ 0.83
HDAC6-231ENST00000488905 KIAA1024Q9UPX6 916 aa20.26■□□□□ 0.83
HDAC6-231ENST00000488905 CACNA1IQ9P0X4 2223 aa20.26■□□□□ 0.83
HDAC6-231ENST00000488905 PATJQ8NI35 1801 aa20.25■□□□□ 0.83
HDAC6-231ENST00000488905 CCL16O15467 120 aa20.25■□□□□ 0.83
HDAC6-231ENST00000488905 XYLBO75191 536 aa20.25■□□□□ 0.83
HDAC6-231ENST00000488905 B3GAT3O94766 335 aa20.25■□□□□ 0.83
HDAC6-231ENST00000488905 FGFR3P22607 806 aa20.25■□□□□ 0.83
HDAC6-231ENST00000488905 CLCNKBP51801 687 aa20.25■□□□□ 0.83
HDAC6-231ENST00000488905 NTHL1P78549 312 aa20.25■□□□□ 0.83
HDAC6-231ENST00000488905 IGSF22Q8N9C0 903 aa20.25■□□□□ 0.83
HDAC6-231ENST00000488905 ST13P5Q8NFI4 369 aaPredicted RBP20.25■□□□□ 0.83
HDAC6-231ENST00000488905 SLC7A14Q8TBB6 771 aa20.25■□□□□ 0.83
HDAC6-231ENST00000488905 UROC1Q96N76 676 aa20.25■□□□□ 0.83
HDAC6-231ENST00000488905 RAB34Q9BZG1 259 aa20.25■□□□□ 0.83
HDAC6-231ENST00000488905 SLC2A4RGQ9NR83 387 aa20.25■□□□□ 0.83
HDAC6-231ENST00000488905 SH2B1Q9NRF2 756 aaPredicted RBP20.25■□□□□ 0.83
HDAC6-231ENST00000488905 CDH7Q9ULB5 785 aa20.25■□□□□ 0.83
HDAC6-231ENST00000488905 TNFSF13BQ9Y275 285 aa20.25■□□□□ 0.83
HDAC6-231ENST00000488905 STK24Q9Y6E0 443 aa20.25■□□□□ 0.83
HDAC6-231ENST00000488905 EP300Q09472 2414 aaPredicted RBP20.24■□□□□ 0.83
HDAC6-231ENST00000488905 K7ERI5 159 aa20.24■□□□□ 0.83
HDAC6-231ENST00000488905 POU2F2P09086 479 aa20.24■□□□□ 0.83
HDAC6-231ENST00000488905 OR1D2P34982 312 aa20.24■□□□□ 0.83
HDAC6-231ENST00000488905 RAB33AQ14088 237 aa20.24■□□□□ 0.83
HDAC6-231ENST00000488905 PDIA5Q14554 519 aa20.24■□□□□ 0.83
HDAC6-231ENST00000488905 AXDND1Q5T1B0 1012 aaPredicted RBP20.24■□□□□ 0.83
HDAC6-231ENST00000488905 PHLDB3Q6NSJ2 640 aa20.24■□□□□ 0.83
HDAC6-231ENST00000488905 CEP120Q8N960 986 aa20.24■□□□□ 0.83
HDAC6-231ENST00000488905 FGF14Q92915 247 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms