RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 RRP1BQ14684 758 aaKnown RBP5.67□□□□□ -1.5
ITGB1-214ENST00000488427 VPS72Q15906 364 aa5.67□□□□□ -1.5
ITGB1-214ENST00000488427 USP39Q53GS9 565 aaKnown RBP5.67□□□□□ -1.5
ITGB1-214ENST00000488427 SPDYAQ5MJ70 313 aa5.67□□□□□ -1.5
ITGB1-214ENST00000488427 HTR3DQ70Z44 454 aa5.67□□□□□ -1.5
ITGB1-214ENST00000488427 TRMT2AQ8IZ69 625 aaKnown RBP5.67□□□□□ -1.5
ITGB1-214ENST00000488427 RPUSD2Q8IZ73 545 aaKnown RBP5.67□□□□□ -1.5
ITGB1-214ENST00000488427 OR52N2Q8NGI0 321 aa5.67□□□□□ -1.5
ITGB1-214ENST00000488427 MNTQ99583 582 aa5.67□□□□□ -1.5
ITGB1-214ENST00000488427 KRTAP3-1Q9BYR8 98 aa5.67□□□□□ -1.5
ITGB1-214ENST00000488427 ZNF703Q9H7S9 590 aaPredicted RBP5.67□□□□□ -1.5
ITGB1-214ENST00000488427 SPON1Q9HCB6 807 aa5.67□□□□□ -1.5
ITGB1-214ENST00000488427 DMRT3Q9NQL9 472 aa5.67□□□□□ -1.5
ITGB1-214ENST00000488427 POGKQ9P215 609 aa5.67□□□□□ -1.5
ITGB1-214ENST00000488427 LUC7L2Q9Y383 392 aaKnown RBP5.67□□□□□ -1.5
ITGB1-214ENST00000488427 TOPBP1Q92547 1522 aa5.67□□□□□ -1.5
ITGB1-214ENST00000488427 TBKBP1A7MCY6 615 aa5.66□□□□□ -1.5
ITGB1-214ENST00000488427 ADCY6O43306 1168 aa5.66□□□□□ -1.5
ITGB1-214ENST00000488427 ALDH1L1O75891 902 aa5.66□□□□□ -1.5
ITGB1-214ENST00000488427 ATP5JP18859 108 aa5.66□□□□□ -1.5
ITGB1-214ENST00000488427 SREBF1P36956 1147 aa5.66□□□□□ -1.5
ITGB1-214ENST00000488427 CDC42EP1Q00587 391 aa5.66□□□□□ -1.5
ITGB1-214ENST00000488427 PPP3CAQ08209 521 aa5.66□□□□□ -1.5
ITGB1-214ENST00000488427 RAB39AQ14964 217 aa5.66□□□□□ -1.5
ITGB1-214ENST00000488427 PCBP2Q15366 365 aaKnown RBP eCLIP5.66□□□□□ -1.5
ITGB1-214ENST00000488427 FAM214AQ32MH5 1076 aa5.66□□□□□ -1.5
ITGB1-214ENST00000488427 UAP1L1Q3KQV9 507 aa5.66□□□□□ -1.5
ITGB1-214ENST00000488427 RHOT1Q8IXI2 618 aa5.66□□□□□ -1.5
ITGB1-214ENST00000488427 NRG4Q8WWG1 115 aa5.66□□□□□ -1.5
ITGB1-214ENST00000488427 EIF2B4Q9UI10 523 aaKnown RBP5.66□□□□□ -1.5
ITGB1-214ENST00000488427 TNKSO95271 1327 aa5.66□□□□□ -1.5
ITGB1-214ENST00000488427 PPRC1Q5VV67 1664 aaKnown RBP5.66□□□□□ -1.5
ITGB1-214ENST00000488427 ARIH2O95376 493 aa5.65□□□□□ -1.5
ITGB1-214ENST00000488427 IL33O95760 270 aa5.65□□□□□ -1.5
ITGB1-214ENST00000488427 S100BP04271 92 aaPredicted RBP5.65□□□□□ -1.5
ITGB1-214ENST00000488427 HLA-DOAP06340 250 aa5.65□□□□□ -1.5
ITGB1-214ENST00000488427 RAP2AP10114 183 aa5.65□□□□□ -1.5
ITGB1-214ENST00000488427 C5AR1P21730 350 aa5.65□□□□□ -1.5
ITGB1-214ENST00000488427 BMT2Q1RMZ1 405 aa5.65□□□□□ -1.5
ITGB1-214ENST00000488427 ATXN7L2Q5T6C5 722 aaPredicted RBP5.65□□□□□ -1.5
ITGB1-214ENST00000488427 SPTY2D1Q68D10 685 aaPredicted RBP5.65□□□□□ -1.5
ITGB1-214ENST00000488427 GADL1Q6ZQY3 521 aa5.65□□□□□ -1.5
ITGB1-214ENST00000488427 Q6ZVL8 140 aa5.65□□□□□ -1.5
ITGB1-214ENST00000488427 TTC7BQ86TV6 843 aa5.65□□□□□ -1.5
ITGB1-214ENST00000488427 SYNE4Q8N205 404 aa5.65□□□□□ -1.5
ITGB1-214ENST00000488427 NLGN4YQ8NFZ3 816 aaPredicted RBP5.65□□□□□ -1.5
ITGB1-214ENST00000488427 HOXB13Q92826 284 aaPredicted RBP5.65□□□□□ -1.5
ITGB1-214ENST00000488427 SLC2A13Q96QE2 648 aa5.65□□□□□ -1.5
ITGB1-214ENST00000488427 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.65□□□□□ -1.5
ITGB1-214ENST00000488427 AJAP1Q9UKB5 411 aaPredicted RBP5.65□□□□□ -1.5
ITGB1-214ENST00000488427 ANKRD6Q9Y2G4 727 aa5.65□□□□□ -1.5
ITGB1-214ENST00000488427 MED1Q15648 1581 aaPredicted RBP5.64□□□□□ -1.51
ITGB1-214ENST00000488427 STC2O76061 302 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 POMCP01189 267 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 FSHBP01225 129 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 ALOX15P16050 662 aaPredicted RBP5.64□□□□□ -1.51
ITGB1-214ENST00000488427 HK1P19367 917 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 AKAP5P24588 427 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 GUCY1A2P33402 732 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 PTGS2P35354 604 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 SCNN1GP51170 649 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 RABGGTBP53611 331 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 OTUD7BQ6GQQ9 843 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 ARMC6Q6NXE6 501 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 LILRA3Q8N6C8 439 aaPredicted RBP5.64□□□□□ -1.51
ITGB1-214ENST00000488427 AOPEPQ8N6M6 819 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 SLC16A11Q8NCK7 471 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 OR10H5Q8NGA6 315 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 CCHCR1Q8TD31 782 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 HSPBAP1Q96EW2 488 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 PLEKHG4BQ96PX9 1271 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 CAMKK2Q96RR4 588 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 NDC1Q9BTX1 674 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 VPS11Q9H270 941 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 TCF7L1Q9HCS4 588 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 GNL3LQ9NVN8 582 aaKnown RBP5.64□□□□□ -1.51
ITGB1-214ENST00000488427 POLHQ9Y253 713 aa5.64□□□□□ -1.51
ITGB1-214ENST00000488427 MAGI1Q96QZ7 1491 aaPredicted RBP5.64□□□□□ -1.51
ITGB1-214ENST00000488427 CEP170Q5SW79 1584 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 GAGE12BA1L429 117 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 KLRG2A4D1S0 409 aaPredicted RBP5.63□□□□□ -1.51
ITGB1-214ENST00000488427 GAGE12HA6NDE8 117 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 FZD9O00144 591 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 SLC16A6O15403 523 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 PCDHGA12O60330 932 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 AMHP03971 560 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 DDCP20711 480 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 FOXE3Q13461 319 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 TTF1Q15361 905 aaPredicted RBP5.63□□□□□ -1.51
ITGB1-214ENST00000488427 CDSNQ15517 529 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 RABL3Q5HYI8 236 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 ODR4Q5SWX8 454 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 AFMIDQ63HM1 303 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 Q6ZRM9 215 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 GPRIN1Q7Z2K8 1008 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 PLXDC1Q8IUK5 500 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 CPA6Q8N4T0 437 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 COA7Q96BR5 231 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 MRI1Q9BV20 369 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 LSM14BQ9BX40 385 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms