RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 CRYGNQ8WXF5 182 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 CTNNBL1Q8WYA6 563 aaPredicted RBP15.2■□□□□ 0.02
RER1-207ENST00000488353 SLC35C1Q96A29 364 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 GMLQ99445 158 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 TYW1Q9NV66 732 aaKnown RBP15.2■□□□□ 0.02
RER1-207ENST00000488353 WDR35Q9P2L0 1181 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 C2CD2Q9Y426 696 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 CHMP2AO43633 222 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 TMEM253P0C7T8 217 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 AP3B2Q13367 1082 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 ZNF211Q13398 564 aaPredicted RBP15.19■□□□□ 0.02
RER1-207ENST00000488353 SETDB1Q15047 1291 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 MTFR1Q15390 333 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 LONRF1Q17RB8 773 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 TMEM154Q6P9G4 183 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 ECHDC2Q86YB7 292 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 TMEM237Q96Q45 408 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 NUDCD1Q96RS6 583 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 EIF2AK1Q9BQI3 630 aaKnown RBP15.19■□□□□ 0.02
RER1-207ENST00000488353 IRAK4Q9NWZ3 460 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 RABGAP1Q9Y3P9 1069 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 SYNGAP1Q96PV0 1343 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 HGSO14964 777 aaPredicted RBP15.19■□□□□ 0.02
RER1-207ENST00000488353 VCAM1P19320 739 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 LMNB1P20700 586 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 RPL13P26373 211 aaKnown RBP15.19■□□□□ 0.02
RER1-207ENST00000488353 LAMB3Q13751 1172 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 COG2Q14746 738 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 Q4G0T1 1027 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 ANKRD42Q8N9B4 389 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 ASAP3Q8TDY4 903 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 DNAJC9Q8WXX5 260 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 MAGEB18Q96M61 343 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 PCDHA3Q9Y5H8 950 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 CNTNAP1P78357 1384 aa15.19■□□□□ 0.02
RER1-207ENST00000488353 CREB1P16220 341 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 STX2P32856 288 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 TUBP50607 506 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 PPP1R15BQ5SWA1 713 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 INTS8Q75QN2 995 aaKnown RBP15.18■□□□□ 0.02
RER1-207ENST00000488353 VSIG1Q86XK7 387 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 TPH2Q8IWU9 490 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 MYCT1Q8N699 235 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 ANKLE1Q8NAG6 615 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 SLC30A5Q8TAD4 765 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 GDAP1Q8TB36 358 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 INPP5DQ92835 1189 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 ART4Q93070 314 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 HERC5Q9UII4 1024 aaKnown RBP15.18■□□□□ 0.02
RER1-207ENST00000488353 PRR12Q9ULL5 1215 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 PFASO15067 1338 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 TGFB1I1O43294 461 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 EYA4O95677 639 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 ABCB4P21439 1286 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 STAT1P42224 750 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 PTDSS1P48651 473 aaKnown RBP15.18■□□□□ 0.02
RER1-207ENST00000488353 MOXD1Q6UVY6 613 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 ARHGEF18Q6ZSZ5 1173 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 GLYCTKQ8IVS8 523 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 RBBP8NLQ8NC74 664 aaPredicted RBP15.18■□□□□ 0.02
RER1-207ENST00000488353 SH3TC2Q8TF17 1288 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 FAM151AQ8WW52 585 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 RPS6KC1Q96S38 1066 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 METTL14Q9HCE5 456 aaKnown RBP15.18■□□□□ 0.02
RER1-207ENST00000488353 MLXIPLQ9NP71 852 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 VAV3Q9UKW4 847 aa15.18■□□□□ 0.02
RER1-207ENST00000488353 SP100P23497 879 aaPredicted RBP15.17■□□□□ 0.02
RER1-207ENST00000488353 UBXN2AP68543 259 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 WASHC2DQ5SRD0 308 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 CGB2Q6NT52 195 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 RINT1Q6NUQ1 792 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 CCDC137Q6PK04 289 aaKnown RBP15.17■□□□□ 0.02
RER1-207ENST00000488353 CYFIP1Q7L576 1253 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 PRELID2Q8N945 189 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 FAM13CQ8NE31 585 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 LNX1Q8TBB1 728 aaPredicted RBP15.17■□□□□ 0.02
RER1-207ENST00000488353 ALG3Q92685 438 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 PITPNM3Q9BZ71 974 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 TRIM4Q9C037 500 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 PIDD1Q9HB75 910 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 CTTNBP2NLQ9P2B4 639 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 TBX3O15119 743 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 FAM13AO94988 1023 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 BRAFP15056 766 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 CTNNA2P26232 953 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 SREBF1P36956 1147 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 RASSF2P50749 326 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 STAT2P52630 851 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 SPDYE2Q495Y8 402 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 IRGCQ6NXR0 463 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 CCDC25Q86WR0 208 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 FAM186BQ8IYM0 893 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 FAM20AQ96MK3 541 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 DDX23Q9BUQ8 820 aaKnown RBP15.17■□□□□ 0.02
RER1-207ENST00000488353 GLIS2Q9BZE0 524 aaPredicted RBP15.17■□□□□ 0.02
RER1-207ENST00000488353 MYLK2Q9H1R3 596 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 SEPT11Q9NVA2 429 aaKnown RBP15.17■□□□□ 0.02
RER1-207ENST00000488353 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.17■□□□□ 0.02
RER1-207ENST00000488353 ZBTB21Q9ULJ3 1066 aa15.17■□□□□ 0.02
RER1-207ENST00000488353 RPL26L1Q9UNX3 145 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms