RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 CD44P16070 742 aaKnown RBP18.7■□□□□ 0.58
SHROOM1-205ENST00000488072 DSC1Q08554 894 aa18.7■□□□□ 0.58
SHROOM1-205ENST00000488072 ALCAMQ13740 583 aa18.7■□□□□ 0.58
SHROOM1-205ENST00000488072 KCNB1Q14721 858 aa18.7■□□□□ 0.58
SHROOM1-205ENST00000488072 SPPL3Q8TCT6 385 aa18.7■□□□□ 0.58
SHROOM1-205ENST00000488072 SMARCE1Q969G3 411 aa18.7■□□□□ 0.58
SHROOM1-205ENST00000488072 CDH23Q9H251 3354 aa18.7■□□□□ 0.58
SHROOM1-205ENST00000488072 KCTD10Q9H3F6 313 aa18.7■□□□□ 0.58
SHROOM1-205ENST00000488072 TMEM206Q9H813 350 aa18.7■□□□□ 0.58
SHROOM1-205ENST00000488072 UBN1Q9NPG3 1134 aa18.7■□□□□ 0.58
SHROOM1-205ENST00000488072 MARCH5Q9NX47 278 aa18.7■□□□□ 0.58
SHROOM1-205ENST00000488072 EXOC7Q9UPT5 735 aa18.7■□□□□ 0.58
SHROOM1-205ENST00000488072 TMEM265A0A087WTH1 108 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 NRP1O14786 923 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 ADRB2P07550 413 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 CLTAP09496 248 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 IGFBP4P22692 258 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 IRS1P35568 1242 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 OR1G1P47890 313 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 CYP2J2P51589 502 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 PSMD2Q13200 908 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 KNOP1Q1ED39 458 aaKnown RBP18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 XKR4Q5GH76 650 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 GPR153Q6NV75 609 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 CBWD2Q8IUF1 395 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 HACE1Q8IYU2 909 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 SLC39A11Q8N1S5 342 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 RDH13Q8NBN7 331 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 HASPINQ8TF76 798 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 ZNF558Q96NG5 402 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 PPP1R10Q96QC0 940 aaKnown RBP18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 RPS6KC1Q96S38 1066 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 MRPL9Q9BYD2 267 aaKnown RBP18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 CLSTN2Q9H4D0 955 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 RNF216Q9NWF9 866 aaPredicted RBP18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 TUBGCP4Q9UGJ1 667 aa18.69■□□□□ 0.58
SHROOM1-205ENST00000488072 TTC26A0AVF1 554 aa18.68■□□□□ 0.58
SHROOM1-205ENST00000488072 H3BNC9 293 aa18.68■□□□□ 0.58
SHROOM1-205ENST00000488072 FGF18O76093 207 aa18.68■□□□□ 0.58
SHROOM1-205ENST00000488072 NFICP08651 508 aa18.68■□□□□ 0.58
SHROOM1-205ENST00000488072 MCM4P33991 863 aa18.68■□□□□ 0.58
SHROOM1-205ENST00000488072 PRCPP42785 496 aa18.68■□□□□ 0.58
SHROOM1-205ENST00000488072 PMS1P54277 932 aaKnown RBP18.68■□□□□ 0.58
SHROOM1-205ENST00000488072 ERVFC1P60507 584 aa18.68■□□□□ 0.58
SHROOM1-205ENST00000488072 LMBRD2Q68DH5 695 aaPredicted RBP18.68■□□□□ 0.58
SHROOM1-205ENST00000488072 ARMCX5Q6P1M9 558 aa18.68■□□□□ 0.58
SHROOM1-205ENST00000488072 TAS1R1Q7RTX1 841 aa18.68■□□□□ 0.58
SHROOM1-205ENST00000488072 HSPBP1Q9NZL4 362 aa18.68■□□□□ 0.58
SHROOM1-205ENST00000488072 C5orf67F2Z3F1 127 aa18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 PPEF2O14830 753 aa18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 SMC2O95347 1197 aa18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 THP07101 528 aa18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 LAG3P18627 525 aa18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 GARTP22102 1010 aa18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 SCP2P22307 547 aa18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 YARSP54577 528 aaKnown RBP18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 GRIK3Q13003 919 aa18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 JADE1Q6IE81 842 aa18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 SLFN12LQ6IEE8 588 aa18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 CD300LGQ6UXG3 332 aa18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 STXBP4Q6ZWJ1 553 aa18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 APBB1IPQ7Z5R6 666 aaPredicted RBP18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 ELOA2Q8IYF1 753 aaPredicted RBP18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 MICALL1Q8N3F8 863 aa18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 POF1BQ8WVV4 589 aa18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 AUTS2Q8WXX7 1259 aa18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 PPM1EQ8WY54 764 aa18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 EEF2KMTQ96G04 330 aa18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 B3GALT6Q96L58 329 aa18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 FAM193BQ96PV7 902 aaPredicted RBP18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 RPF1Q9H9Y2 349 aaKnown RBP18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 CNTN3Q9P232 1028 aa18.67■□□□□ 0.58
SHROOM1-205ENST00000488072 COL4A4P53420 1690 aaPredicted RBP18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 TRIM49BA6NDI0 452 aa18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 CASP4P49662 377 aa18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 MORC3Q14149 939 aa18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 CCDC85BQ15834 202 aaPredicted RBP18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 ZNF658Q5TYW1 1059 aaPredicted RBP18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 EFCAB13Q8IY85 973 aa18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 C3orf58Q8NDZ4 430 aa18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 PLEKHO2Q8TD55 490 aa18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 KIF12Q96FN5 646 aa18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 IGSF21Q96ID5 467 aa18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 GSDMAQ96QA5 445 aa18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 SPG21Q9NZD8 308 aa18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 KANSL3Q9P2N6 904 aa18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 FAN1Q9Y2M0 1017 aa18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 PCDHB12Q9Y5F1 795 aa18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 MTCH2Q9Y6C9 303 aa18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 MYO9BQ13459 2157 aa18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 UBE4BO95155 1302 aa18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 PTPRJQ12913 1337 aa18.66■□□□□ 0.58
SHROOM1-205ENST00000488072 I3L4J1 428 aa18.65■□□□□ 0.58
SHROOM1-205ENST00000488072 EXTL3O43909 919 aa18.65■□□□□ 0.58
SHROOM1-205ENST00000488072 KIF4AO95239 1232 aa18.65■□□□□ 0.58
SHROOM1-205ENST00000488072 RB1P06400 928 aa18.65■□□□□ 0.58
SHROOM1-205ENST00000488072 KCNE1P15382 129 aa18.65■□□□□ 0.58
SHROOM1-205ENST00000488072 ABCD1P33897 745 aa18.65■□□□□ 0.58
SHROOM1-205ENST00000488072 CLCNKBP51801 687 aa18.65■□□□□ 0.58
SHROOM1-205ENST00000488072 TUSC3Q13454 348 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms