RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 USP41Q3LFD5 358 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ZNF568Q3ZCX4 644 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 PRSS55Q6UWB4 352 aaPredicted RBP12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 CD300LGQ6UXG3 332 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 CCDC149Q6ZUS6 474 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 GPR65Q8IYL9 337 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ZDHHC14Q8IZN3 488 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 C3orf58Q8NDZ4 430 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 RIN2Q8WYP3 895 aaPredicted RBP12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ZNF707Q96C28 371 aaPredicted RBP12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ACO2Q99798 780 aaKnown RBP12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 RHOBTB2Q9BYZ6 727 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 TMEM134Q9H6X4 195 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 GOLGA2P5Q9HBQ8 144 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 FNIP2Q9P278 1114 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 SORCS3Q9UPU3 1222 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 SSX2IPQ9Y2D8 614 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 WDR87Q6ZQQ6 2873 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 TMEM189-UBE2V1I3L0A0 370 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 K7ERI5 159 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 SLC16A4O15374 487 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 PDGFBP01127 241 aaPredicted RBP12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 MYBP10242 640 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 GRM5P41594 1212 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 VCPP55072 806 aaKnown RBP12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ZRSR1Q15695 479 aaKnown RBP12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 XKR4Q5GH76 650 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ATAT1Q5SQI0 421 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 LILRA6Q6PI73 481 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ALYREFQ86V81 257 aaKnown RBP12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 GLYCTKQ8IVS8 523 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 SYT2Q8N9I0 419 aaPredicted RBP12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 TMEM161BQ8NDZ6 487 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 PIK3R5Q8WYR1 880 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 SNX27Q96L92 541 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ZMAT2Q96NC0 199 aaKnown RBP12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 PLIN2Q99541 437 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 TIPINQ9BVW5 301 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 TARS2Q9BW92 718 aaKnown RBP12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 MRPL4Q9BYD3 311 aaKnown RBP12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 NT5C3AQ9H0P0 336 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 C17orf75Q9HAS0 396 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 KMT5AQ9NQR1 393 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 FBXW11Q9UKB1 542 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 CLUHO75153 1309 aa12.32□□□□□ -0.44
RAB11FIP3-210ENST00000487899 NUP210Q8TEM1 1887 aaPredicted RBP12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 NPHP3-ACAD11A0A0J9YXS1 232 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 SPDYE4A6NLX3 237 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ADAM12O43184 909 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 C1RP00736 705 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 SPATA31D3P0C874 917 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 MAPTP10636 758 aaKnown RBP12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 CLCNKBP51801 687 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 CACNB1Q02641 598 aaPredicted RBP12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 CREMQ03060 361 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 PSMD5Q16401 504 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 UPP1Q16831 310 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ARSHQ5FYA8 562 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 MPZL3Q6UWV2 235 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ALKAL1Q6UXT8 129 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 SPATA31D4Q6ZUB0 917 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 BRAPQ7Z569 592 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 PALB2Q86YC2 1186 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 FBXL6Q8N531 539 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 PRSS33Q8NF86 280 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 LNX1Q8TBB1 728 aaPredicted RBP12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 SPIRE2Q8WWL2 714 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 PBXIP1Q96AQ6 731 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 AK8Q96MA6 479 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 MFSD14AQ96MC6 490 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 CLSTN3Q9BQT9 956 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 TTPALQ9BTX7 342 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 KCNH6Q9H252 994 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 BLOC1S4Q9NUP1 217 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 KCND2Q9NZV8 630 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 DENND4CQ5VZ89 1909 aa12.31□□□□□ -0.44
RAB11FIP3-210ENST00000487899 FANCMQ8IYD8 2048 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 KIF26AQ9ULI4 1882 aaPredicted RBP12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 SMIM28A0A1B0GU29 152 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 CCDC195A0A1B0GUA6 201 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 SFI1A8K8P3 1242 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 TADA2AO75478 443 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 PLA2G4BP0C869 781 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 MCF2P10911 925 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 PLS3P13797 630 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 NCKAP1LP55160 1127 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 NHLH1Q02575 133 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 NOLC1Q14978 699 aaKnown RBP eCLIP12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 IER5LQ5T953 404 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 FAM171A1Q5VUB5 890 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 LARP1BQ659C4 914 aaKnown RBP12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ZBTB33Q86T24 672 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 UBALD2Q8IYN6 164 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 KCTD17Q8N5Z5 321 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 HDAC7Q8WUI4 952 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 KCNN1Q92952 543 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 DDX27Q96GQ7 796 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms