RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 GOLGA8IPA6NC78 632 aa21.32■■□□□ 1
SEC22A-208ENST00000487572 GOLGA8JA6NMD2 632 aa21.32■■□□□ 1
SEC22A-208ENST00000487572 TGFB1I1O43294 461 aa21.32■■□□□ 1
SEC22A-208ENST00000487572 THP07101 528 aa21.32■■□□□ 1
SEC22A-208ENST00000487572 GARTP22102 1010 aa21.32■■□□□ 1
SEC22A-208ENST00000487572 IGFBP4P22692 258 aa21.32■■□□□ 1
SEC22A-208ENST00000487572 ENOX2Q16206 610 aaKnown RBP21.32■■□□□ 1
SEC22A-208ENST00000487572 SLC10A6Q3KNW5 377 aa21.32■■□□□ 1
SEC22A-208ENST00000487572 ISM2Q6H9L7 571 aa21.32■■□□□ 1
SEC22A-208ENST00000487572 HS2ST1Q7LGA3 356 aa21.32■■□□□ 1
SEC22A-208ENST00000487572 ZSWIM2Q8NEG5 633 aa21.32■■□□□ 1
SEC22A-208ENST00000487572 GSDMAQ96QA5 445 aa21.32■■□□□ 1
SEC22A-208ENST00000487572 FAM213AQ9BRX8 229 aa21.32■■□□□ 1
SEC22A-208ENST00000487572 AGPAT3Q9NRZ7 376 aa21.32■■□□□ 1
SEC22A-208ENST00000487572 SPG21Q9NZD8 308 aa21.32■■□□□ 1
SEC22A-208ENST00000487572 CACNG4Q9UBN1 327 aa21.32■■□□□ 1
SEC22A-208ENST00000487572 CPSF3Q9UKF6 684 aaKnown RBP21.32■■□□□ 1
SEC22A-208ENST00000487572 SZT2Q5T011 3432 aa21.32■■□□□ 1
SEC22A-208ENST00000487572 SMIM28A0A1B0GU29 152 aa21.31■■□□□ 1
SEC22A-208ENST00000487572 CLIC2O15247 247 aa21.31■■□□□ 1
SEC22A-208ENST00000487572 GRM6O15303 877 aa21.31■■□□□ 1
SEC22A-208ENST00000487572 LPXNO60711 386 aa21.31■■□□□ 1
SEC22A-208ENST00000487572 FGF18O76093 207 aa21.31■■□□□ 1
SEC22A-208ENST00000487572 ITGB1P05556 798 aa21.31■■□□□ 1
SEC22A-208ENST00000487572 GALTP07902 379 aa21.31■■□□□ 1
SEC22A-208ENST00000487572 OR1G1P47890 313 aa21.31■■□□□ 1
SEC22A-208ENST00000487572 PPP2R3AQ06190 1150 aa21.31■■□□□ 1
SEC22A-208ENST00000487572 SPAG1Q07617 926 aa21.31■■□□□ 1
SEC22A-208ENST00000487572 DSC1Q08554 894 aa21.31■■□□□ 1
SEC22A-208ENST00000487572 ADGRE1Q14246 886 aa21.31■■□□□ 1
SEC22A-208ENST00000487572 ALKAL1Q6UXT8 129 aa21.31■■□□□ 1
SEC22A-208ENST00000487572 COLGALT2Q8IYK4 626 aa21.31■■□□□ 1
SEC22A-208ENST00000487572 RABGGTAQ92696 567 aa21.31■■□□□ 1
SEC22A-208ENST00000487572 P2RX5Q93086 422 aa21.31■■□□□ 1
SEC22A-208ENST00000487572 TMEM175Q9BSA9 504 aa21.31■■□□□ 1
SEC22A-208ENST00000487572 CNTN3Q9P232 1028 aa21.31■■□□□ 1
SEC22A-208ENST00000487572 PRG3Q9Y2Y8 225 aaPredicted RBP21.31■■□□□ 1
SEC22A-208ENST00000487572 CASTOR2A6NHX0 329 aa21.3■■□□□ 1
SEC22A-208ENST00000487572 LACTBL1A8MY62 500 aa21.3■■□□□ 1
SEC22A-208ENST00000487572 KIF20AO95235 890 aa21.3■■□□□ 1
SEC22A-208ENST00000487572 ALDH2P05091 517 aa21.3■■□□□ 1
SEC22A-208ENST00000487572 FOSL2P15408 326 aa21.3■■□□□ 1
SEC22A-208ENST00000487572 PPM1AP35813 382 aa21.3■■□□□ 1
SEC22A-208ENST00000487572 CYP2J2P51589 502 aa21.3■■□□□ 1
SEC22A-208ENST00000487572 TUSC3Q13454 348 aa21.3■■□□□ 1
SEC22A-208ENST00000487572 XKR4Q5GH76 650 aa21.3■■□□□ 1
SEC22A-208ENST00000487572 TMEM173Q86WV6 379 aaPredicted RBP21.3■■□□□ 1
SEC22A-208ENST00000487572 SLC39A11Q8N1S5 342 aa21.3■■□□□ 1
SEC22A-208ENST00000487572 SPATA20Q8TB22 786 aa21.3■■□□□ 1
SEC22A-208ENST00000487572 ZMAT2Q96NC0 199 aaKnown RBP21.3■■□□□ 1
SEC22A-208ENST00000487572 PPP1R10Q96QC0 940 aaKnown RBP21.3■■□□□ 1
SEC22A-208ENST00000487572 HSPBP1Q9NZL4 362 aa21.3■■□□□ 1
SEC22A-208ENST00000487572 MAN1B1Q9UKM7 699 aa21.3■■□□□ 1
SEC22A-208ENST00000487572 FAN1Q9Y2M0 1017 aa21.3■■□□□ 1
SEC22A-208ENST00000487572 TTC26A0AVF1 554 aa21.29■■□□□ 1
SEC22A-208ENST00000487572 BIN1O00499 593 aa21.29■■□□□ 1
SEC22A-208ENST00000487572 NRP1O14786 923 aa21.29■■□□□ 1
SEC22A-208ENST00000487572 EXTL3O43909 919 aa21.29■■□□□ 1
SEC22A-208ENST00000487572 ZNF658Q5TYW1 1059 aaPredicted RBP21.29■■□□□ 1
SEC22A-208ENST00000487572 CRELD2Q6UXH1 353 aaPredicted RBP21.29■■□□□ 1
SEC22A-208ENST00000487572 GPD1LQ8N335 351 aa21.29■■□□□ 1
SEC22A-208ENST00000487572 GPT2Q8TD30 523 aa21.29■■□□□ 1
SEC22A-208ENST00000487572 BCL7CQ8WUZ0 217 aaPredicted RBP21.29■■□□□ 1
SEC22A-208ENST00000487572 TMEM169Q96HH4 297 aa21.29■■□□□ 1
SEC22A-208ENST00000487572 CLSTN2Q9H4D0 955 aa21.29■■□□□ 1
SEC22A-208ENST00000487572 CHD7Q9P2D1 2997 aa21.29■■□□□ 1
SEC22A-208ENST00000487572 TDRD15B5MCY1 1934 aaKnown RBP21.28■■□□□ 1
SEC22A-208ENST00000487572 F8W810 466 aa21.28■■□□□ 1
SEC22A-208ENST00000487572 LDHAP00338 332 aaKnown RBP21.28■■□□□ 1
SEC22A-208ENST00000487572 KCNE1P15382 129 aa21.28■■□□□ 1
SEC22A-208ENST00000487572 SNRPFP62306 86 aaKnown RBP21.28■■□□□ 1
SEC22A-208ENST00000487572 KRT17Q04695 432 aa21.28■■□□□ 1
SEC22A-208ENST00000487572 NAB2Q15742 525 aa21.28■■□□□ 1
SEC22A-208ENST00000487572 MICALL1Q8N3F8 863 aa21.28■■□□□ 1
SEC22A-208ENST00000487572 GUF1Q8N442 669 aaKnown RBP21.28■■□□□ 1
SEC22A-208ENST00000487572 GOLGA5Q8TBA6 731 aa21.28■■□□□ 1
SEC22A-208ENST00000487572 SPPL3Q8TCT6 385 aa21.28■■□□□ 1
SEC22A-208ENST00000487572 POF1BQ8WVV4 589 aa21.28■■□□□ 1
SEC22A-208ENST00000487572 C18orf25Q96B23 403 aaPredicted RBP21.28■■□□□ 1
SEC22A-208ENST00000487572 KIF12Q96FN5 646 aa21.28■■□□□ 1
SEC22A-208ENST00000487572 IGSF21Q96ID5 467 aa21.28■■□□□ 1
SEC22A-208ENST00000487572 PAAF1Q9BRP4 392 aa21.28■■□□□ 1
SEC22A-208ENST00000487572 KCTD10Q9H3F6 313 aa21.28■■□□□ 1
SEC22A-208ENST00000487572 PLEKHA5Q9HAU0 1116 aa21.28■■□□□ 1
SEC22A-208ENST00000487572 GOLGA2P5Q9HBQ8 144 aa21.28■■□□□ 1
SEC22A-208ENST00000487572 SLC38A7Q9NVC3 462 aa21.28■■□□□ 1
SEC22A-208ENST00000487572 KIAA0391O15091 583 aaKnown RBP21.27■■□□□ 1
SEC22A-208ENST00000487572 DNAJB1P25685 340 aa21.27■■□□□ 1
SEC22A-208ENST00000487572 SOX4Q06945 474 aaPredicted RBP21.27■■□□□ 1
SEC22A-208ENST00000487572 PTPROQ16827 1216 aa21.27■■□□□ 1
SEC22A-208ENST00000487572 NUP62CLQ9H1M0 184 aa21.27■■□□□ 1
SEC22A-208ENST00000487572 RBAKQ9NYW8 714 aaPredicted RBP21.27■■□□□ 1
SEC22A-208ENST00000487572 CGNQ9P2M7 1197 aaKnown RBP21.27■■□□□ 1
SEC22A-208ENST00000487572 CARNS1A5YM72 827 aa21.26■□□□□ 0.99
SEC22A-208ENST00000487572 PDXKO00764 312 aa21.26■□□□□ 0.99
SEC22A-208ENST00000487572 PRCPP42785 496 aa21.26■□□□□ 0.99
SEC22A-208ENST00000487572 PLCB3Q01970 1234 aa21.26■□□□□ 0.99
SEC22A-208ENST00000487572 HSP90AA2PQ14568 343 aaPredicted RBP21.26■□□□□ 0.99
SEC22A-208ENST00000487572 JADE1Q6IE81 842 aa21.26■□□□□ 0.99
SEC22A-208ENST00000487572 CBWD2Q8IUF1 395 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms