RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 COL4A2P08572 1712 aa16.92■□□□□ 0.3
NME1-208ENST00000487481 FRYQ5TBA9 3013 aa16.91■□□□□ 0.3
NME1-208ENST00000487481 ADAM12O43184 909 aa16.91■□□□□ 0.3
NME1-208ENST00000487481 KIF4AO95239 1232 aa16.91■□□□□ 0.3
NME1-208ENST00000487481 P4HBP07237 508 aaKnown RBP16.91■□□□□ 0.3
NME1-208ENST00000487481 HMGB1P09429 215 aaKnown RBP16.91■□□□□ 0.3
NME1-208ENST00000487481 ARF4P18085 180 aaPredicted RBP16.91■□□□□ 0.3
NME1-208ENST00000487481 NLRP5P59047 1200 aa16.91■□□□□ 0.3
NME1-208ENST00000487481 FGD1P98174 961 aa16.91■□□□□ 0.3
NME1-208ENST00000487481 MBTD1Q05BQ5 628 aa16.91■□□□□ 0.3
NME1-208ENST00000487481 POU5F1BQ06416 359 aa16.91■□□□□ 0.3
NME1-208ENST00000487481 ELAVL2Q12926 359 aaKnown RBP16.91■□□□□ 0.3
NME1-208ENST00000487481 TUSC3Q13454 348 aa16.91■□□□□ 0.3
NME1-208ENST00000487481 RAB33AQ14088 237 aa16.91■□□□□ 0.3
NME1-208ENST00000487481 TFDP1Q14186 410 aa16.91■□□□□ 0.3
NME1-208ENST00000487481 SIM2Q14190 667 aaPredicted RBP16.91■□□□□ 0.3
NME1-208ENST00000487481 KRT32Q14532 448 aa16.91■□□□□ 0.3
NME1-208ENST00000487481 AMHR2Q16671 573 aa16.91■□□□□ 0.3
NME1-208ENST00000487481 ADCK5Q3MIX3 580 aa16.91■□□□□ 0.3
NME1-208ENST00000487481 TSGA10IPQ3SY00 556 aa16.91■□□□□ 0.3
NME1-208ENST00000487481 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.91■□□□□ 0.3
NME1-208ENST00000487481 C4orf19Q8IY42 314 aa16.91■□□□□ 0.3
NME1-208ENST00000487481 MTRQ99707 1265 aa16.91■□□□□ 0.3
NME1-208ENST00000487481 PAAF1Q9BRP4 392 aa16.91■□□□□ 0.3
NME1-208ENST00000487481 AVENQ9NQS1 362 aaPredicted RBP16.91■□□□□ 0.3
NME1-208ENST00000487481 WRAP73Q9P2S5 460 aaPredicted RBP16.91■□□□□ 0.3
NME1-208ENST00000487481 DDX25Q9UHL0 483 aaKnown RBP16.91■□□□□ 0.3
NME1-208ENST00000487481 RALYQ9UKM9 306 aaKnown RBP16.91■□□□□ 0.3
NME1-208ENST00000487481 GREB1Q4ZG55 1949 aa16.9■□□□□ 0.3
NME1-208ENST00000487481 TICRRQ7Z2Z1 1910 aa16.9■□□□□ 0.3
NME1-208ENST00000487481 GDF9O60383 454 aa16.9■□□□□ 0.3
NME1-208ENST00000487481 RHOP08100 348 aa16.9■□□□□ 0.3
NME1-208ENST00000487481 YWHABP31946 246 aaKnown RBP16.9■□□□□ 0.3
NME1-208ENST00000487481 CNR2P34972 360 aa16.9■□□□□ 0.3
NME1-208ENST00000487481 IL31Q6EBC2 164 aa16.9■□□□□ 0.3
NME1-208ENST00000487481 TANGO2Q6ICL3 276 aa16.9■□□□□ 0.3
NME1-208ENST00000487481 SLC27A1Q6PCB7 646 aa16.9■□□□□ 0.3
NME1-208ENST00000487481 OTUD6AQ7L8S5 288 aa16.9■□□□□ 0.3
NME1-208ENST00000487481 MCRS1Q96EZ8 462 aa16.9■□□□□ 0.3
NME1-208ENST00000487481 LXNQ9BS40 222 aa16.9■□□□□ 0.3
NME1-208ENST00000487481 BRD9Q9H8M2 597 aa16.9■□□□□ 0.3
NME1-208ENST00000487481 KLK14Q9P0G3 267 aa16.9■□□□□ 0.3
NME1-208ENST00000487481 PARP2Q9UGN5 583 aa16.9■□□□□ 0.3
NME1-208ENST00000487481 VAV3Q9UKW4 847 aa16.9■□□□□ 0.3
NME1-208ENST00000487481 ASPMQ8IZT6 3477 aa16.9■□□□□ 0.3
NME1-208ENST00000487481 CASTOR2A6NHX0 329 aa16.89■□□□□ 0.29
NME1-208ENST00000487481 NPTXRO95502 500 aa16.89■□□□□ 0.29
NME1-208ENST00000487481 CXCL12P48061 93 aa16.89■□□□□ 0.29
NME1-208ENST00000487481 LIMK1P53667 647 aa16.89■□□□□ 0.29
NME1-208ENST00000487481 COL9A2Q14055 689 aaPredicted RBP16.89■□□□□ 0.29
NME1-208ENST00000487481 NTRK3Q16288 839 aa16.89■□□□□ 0.29
NME1-208ENST00000487481 SLC5A9Q2M3M2 681 aa16.89■□□□□ 0.29
NME1-208ENST00000487481 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.89■□□□□ 0.29
NME1-208ENST00000487481 SLC26A6Q9BXS9 759 aa16.89■□□□□ 0.29
NME1-208ENST00000487481 NFKBIZQ9BYH8 718 aa16.89■□□□□ 0.29
NME1-208ENST00000487481 TRPV5Q9NQA5 729 aa16.89■□□□□ 0.29
NME1-208ENST00000487481 PCDHA4Q9UN74 947 aa16.89■□□□□ 0.29
NME1-208ENST00000487481 CEBPBP17676 345 aa16.88■□□□□ 0.29
NME1-208ENST00000487481 FCARP24071 287 aa16.88■□□□□ 0.29
NME1-208ENST00000487481 OR1D2P34982 312 aa16.88■□□□□ 0.29
NME1-208ENST00000487481 SATB1Q01826 763 aa16.88■□□□□ 0.29
NME1-208ENST00000487481 XKR9Q5GH70 373 aa16.88■□□□□ 0.29
NME1-208ENST00000487481 RASEFQ8IZ41 740 aa16.88■□□□□ 0.29
NME1-208ENST00000487481 FAM3CQ92520 227 aa16.88■□□□□ 0.29
NME1-208ENST00000487481 IRF7Q92985 503 aa16.88■□□□□ 0.29
NME1-208ENST00000487481 FAM20AQ96MK3 541 aa16.88■□□□□ 0.29
NME1-208ENST00000487481 TRMT61BQ9BVS5 477 aaKnown RBP16.88■□□□□ 0.29
NME1-208ENST00000487481 SLKQ9H2G2 1235 aaPredicted RBP16.88■□□□□ 0.29
NME1-208ENST00000487481 LMAN1LQ9HAT1 526 aa16.88■□□□□ 0.29
NME1-208ENST00000487481 ZFP14Q9HCL3 533 aa16.88■□□□□ 0.29
NME1-208ENST00000487481 XPNPEP1Q9NQW7 623 aa16.88■□□□□ 0.29
NME1-208ENST00000487481 MTRRQ9UBK8 725 aa16.88■□□□□ 0.29
NME1-208ENST00000487481 SPAG17Q6Q759 2223 aa16.87■□□□□ 0.29
NME1-208ENST00000487481 A0A1B0GUA9 196 aa16.87■□□□□ 0.29
NME1-208ENST00000487481 B4GALT5O43286 388 aa16.87■□□□□ 0.29
NME1-208ENST00000487481 HRO43593 1189 aa16.87■□□□□ 0.29
NME1-208ENST00000487481 SLC37A4O43826 429 aa16.87■□□□□ 0.29
NME1-208ENST00000487481 IFNAR1P17181 557 aa16.87■□□□□ 0.29
NME1-208ENST00000487481 CAPSQ13938 189 aa16.87■□□□□ 0.29
NME1-208ENST00000487481 GRM2Q14416 872 aa16.87■□□□□ 0.29
NME1-208ENST00000487481 N4BP2L1Q5TBK1 243 aaPredicted RBP16.87■□□□□ 0.29
NME1-208ENST00000487481 BRF1Q92994 677 aa16.87■□□□□ 0.29
NME1-208ENST00000487481 KCNMB3Q9NPA1 279 aa16.87■□□□□ 0.29
NME1-208ENST00000487481 PIAS3Q9Y6X2 628 aa16.87■□□□□ 0.29
NME1-208ENST00000487481 CHURC1-FNTBB4DL54 471 aa16.86■□□□□ 0.29
NME1-208ENST00000487481 M0R2N6 131 aa16.86■□□□□ 0.29
NME1-208ENST00000487481 PAPSS2O95340 614 aaPredicted RBP16.86■□□□□ 0.29
NME1-208ENST00000487481 THP07101 528 aa16.86■□□□□ 0.29
NME1-208ENST00000487481 CHRNB1P11230 501 aa16.86■□□□□ 0.29
NME1-208ENST00000487481 FGFR3P22607 806 aa16.86■□□□□ 0.29
NME1-208ENST00000487481 FNTBP49356 437 aa16.86■□□□□ 0.29
NME1-208ENST00000487481 EPHA7Q15375 998 aa16.86■□□□□ 0.29
NME1-208ENST00000487481 AASDHQ4L235 1098 aaPredicted RBP16.86■□□□□ 0.29
NME1-208ENST00000487481 POTEHQ6S545 545 aa16.86■□□□□ 0.29
NME1-208ENST00000487481 Q6ZUG5 572 aa16.86■□□□□ 0.29
NME1-208ENST00000487481 LONP2Q86WA8 852 aa16.86■□□□□ 0.29
NME1-208ENST00000487481 CDR2LQ86X02 465 aaPredicted RBP16.86■□□□□ 0.29
NME1-208ENST00000487481 MAP4K3Q8IVH8 894 aa16.86■□□□□ 0.29
NME1-208ENST00000487481 BLIDQ8IZY5 108 aa16.86■□□□□ 0.29
NME1-208ENST00000487481 SPEM1Q8N4L4 309 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms