RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 PI15O43692 258 aa13.43□□□□□ -0.26
VPS16-208ENST00000487461 ZMYND10O75800 440 aa13.43□□□□□ -0.26
VPS16-208ENST00000487461 CDC25AP30304 524 aa13.43□□□□□ -0.26
VPS16-208ENST00000487461 CREMQ03060 361 aa13.43□□□□□ -0.26
VPS16-208ENST00000487461 DCAF4L1Q3SXM0 396 aa13.43□□□□□ -0.26
VPS16-208ENST00000487461 C8orf34Q49A92 452 aa13.43□□□□□ -0.26
VPS16-208ENST00000487461 CD300LGQ6UXG3 332 aa13.43□□□□□ -0.26
VPS16-208ENST00000487461 SNX29Q8TEQ0 813 aa13.43□□□□□ -0.26
VPS16-208ENST00000487461 PIK3R5Q8WYR1 880 aa13.43□□□□□ -0.26
VPS16-208ENST00000487461 DNM3Q9UQ16 869 aa13.43□□□□□ -0.26
VPS16-208ENST00000487461 CCDC169A6NNP5 214 aa13.42□□□□□ -0.26
VPS16-208ENST00000487461 LAMP2P13473 410 aa13.42□□□□□ -0.26
VPS16-208ENST00000487461 NPTX2P47972 431 aa13.42□□□□□ -0.26
VPS16-208ENST00000487461 PEX3P56589 373 aa13.42□□□□□ -0.26
VPS16-208ENST00000487461 PSMD5Q16401 504 aa13.42□□□□□ -0.26
VPS16-208ENST00000487461 GLRA4Q5JXX5 417 aa13.42□□□□□ -0.26
VPS16-208ENST00000487461 CWF19L1Q69YN2 538 aaKnown RBP13.42□□□□□ -0.26
VPS16-208ENST00000487461 DCLRE1AQ6PJP8 1040 aa13.42□□□□□ -0.26
VPS16-208ENST00000487461 KCNK18Q7Z418 384 aa13.42□□□□□ -0.26
VPS16-208ENST00000487461 DAW1Q8N136 415 aa13.42□□□□□ -0.26
VPS16-208ENST00000487461 SIX5Q8N196 739 aa13.42□□□□□ -0.26
VPS16-208ENST00000487461 PPP1R10Q96QC0 940 aaKnown RBP13.42□□□□□ -0.26
VPS16-208ENST00000487461 ACO2Q99798 780 aaKnown RBP13.42□□□□□ -0.26
VPS16-208ENST00000487461 MMTAG2Q9BU76 263 aaKnown RBP13.42□□□□□ -0.26
VPS16-208ENST00000487461 RUSC1Q9BVN2 902 aa13.42□□□□□ -0.26
VPS16-208ENST00000487461 PTPRHQ9HD43 1115 aa13.42□□□□□ -0.26
VPS16-208ENST00000487461 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.42□□□□□ -0.26
VPS16-208ENST00000487461 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.42□□□□□ -0.26
VPS16-208ENST00000487461 FBXW11Q9UKB1 542 aa13.42□□□□□ -0.26
VPS16-208ENST00000487461 FBXL21Q9UKT6 434 aa13.42□□□□□ -0.26
VPS16-208ENST00000487461 TNFSF13BQ9Y275 285 aa13.42□□□□□ -0.26
VPS16-208ENST00000487461 STK24Q9Y6E0 443 aa13.42□□□□□ -0.26
VPS16-208ENST00000487461 SMIM28A0A1B0GU29 152 aa13.41□□□□□ -0.26
VPS16-208ENST00000487461 SFI1A8K8P3 1242 aa13.41□□□□□ -0.26
VPS16-208ENST00000487461 HIP1RO75146 1068 aa13.41□□□□□ -0.26
VPS16-208ENST00000487461 B3GAT3O94766 335 aa13.41□□□□□ -0.26
VPS16-208ENST00000487461 CFHP08603 1231 aa13.41□□□□□ -0.26
VPS16-208ENST00000487461 FGFR3P22607 806 aa13.41□□□□□ -0.26
VPS16-208ENST00000487461 CLCNKBP51801 687 aa13.41□□□□□ -0.26
VPS16-208ENST00000487461 ELAVL2Q12926 359 aaKnown RBP13.41□□□□□ -0.26
VPS16-208ENST00000487461 KRT79Q5XKE5 535 aa13.41□□□□□ -0.26
VPS16-208ENST00000487461 RINT1Q6NUQ1 792 aa13.41□□□□□ -0.26
VPS16-208ENST00000487461 ALKAL1Q6UXT8 129 aa13.41□□□□□ -0.26
VPS16-208ENST00000487461 DTHD1Q6ZMT9 781 aa13.41□□□□□ -0.26
VPS16-208ENST00000487461 C1orf186Q6ZWK4 172 aa13.41□□□□□ -0.26
VPS16-208ENST00000487461 TAS1R3Q7RTX0 852 aa13.41□□□□□ -0.26
VPS16-208ENST00000487461 CEP120Q8N960 986 aa13.41□□□□□ -0.26
VPS16-208ENST00000487461 ST13P5Q8NFI4 369 aaPredicted RBP13.41□□□□□ -0.26
VPS16-208ENST00000487461 RAB34Q9BZG1 259 aa13.41□□□□□ -0.26
VPS16-208ENST00000487461 TMEM134Q9H6X4 195 aa13.41□□□□□ -0.26
VPS16-208ENST00000487461 WNT16Q9UBV4 365 aa13.41□□□□□ -0.26
VPS16-208ENST00000487461 DAXXQ9UER7 740 aaPredicted RBP13.41□□□□□ -0.26
VPS16-208ENST00000487461 MTCL1Q9Y4B5 1905 aaKnown RBP13.41□□□□□ -0.26
VPS16-208ENST00000487461 ZFHX2Q9C0A1 2572 aaPredicted RBP13.4□□□□□ -0.26
VPS16-208ENST00000487461 KRBA1A5PL33 1030 aa13.4□□□□□ -0.26
VPS16-208ENST00000487461 ANHXE9PGG2 379 aa13.4□□□□□ -0.26
VPS16-208ENST00000487461 TMEM189-UBE2V1I3L0A0 370 aa13.4□□□□□ -0.26
VPS16-208ENST00000487461 LAD1O00515 517 aa13.4□□□□□ -0.26
VPS16-208ENST00000487461 HNRNPA1P09651 372 aaKnown RBP eCLIP13.4□□□□□ -0.26
VPS16-208ENST00000487461 AOC1P19801 751 aa13.4□□□□□ -0.26
VPS16-208ENST00000487461 FSHRP23945 695 aa13.4□□□□□ -0.26
VPS16-208ENST00000487461 PRPHP41219 470 aa13.4□□□□□ -0.26
VPS16-208ENST00000487461 GRM5P41594 1212 aa13.4□□□□□ -0.26
VPS16-208ENST00000487461 OSTNP61366 133 aa13.4□□□□□ -0.26
VPS16-208ENST00000487461 NTHL1P78549 312 aa13.4□□□□□ -0.26
VPS16-208ENST00000487461 MAPK7Q13164 816 aa13.4□□□□□ -0.26
VPS16-208ENST00000487461 RAB33AQ14088 237 aa13.4□□□□□ -0.26
VPS16-208ENST00000487461 UPP1Q16831 310 aa13.4□□□□□ -0.26
VPS16-208ENST00000487461 XKR4Q5GH76 650 aa13.4□□□□□ -0.26
VPS16-208ENST00000487461 RSPO2Q6UXX9 243 aaPredicted RBP13.4□□□□□ -0.26
VPS16-208ENST00000487461 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.4□□□□□ -0.26
VPS16-208ENST00000487461 GET4Q7L5D6 327 aaPredicted RBP13.4□□□□□ -0.26
VPS16-208ENST00000487461 GRASPQ7Z6J2 395 aaPredicted RBP13.4□□□□□ -0.26
VPS16-208ENST00000487461 NXPE3Q969Y0 559 aa13.4□□□□□ -0.26
VPS16-208ENST00000487461 TARS2Q9BW92 718 aaKnown RBP13.4□□□□□ -0.26
VPS16-208ENST00000487461 CDT1Q9H211 546 aa13.4□□□□□ -0.26
VPS16-208ENST00000487461 GOLGA2P5Q9HBQ8 144 aa13.4□□□□□ -0.26
VPS16-208ENST00000487461 ARHGAP28Q9P2N2 729 aa13.4□□□□□ -0.26
VPS16-208ENST00000487461 DOCK6Q96HP0 2047 aa13.4□□□□□ -0.26
VPS16-208ENST00000487461 PROB1E7EW31 1015 aa13.39□□□□□ -0.27
VPS16-208ENST00000487461 I3L4J1 428 aa13.39□□□□□ -0.27
VPS16-208ENST00000487461 ABLIM1O14639 778 aa13.39□□□□□ -0.27
VPS16-208ENST00000487461 CCL16O15467 120 aa13.39□□□□□ -0.27
VPS16-208ENST00000487461 GFRA3O60609 400 aa13.39□□□□□ -0.27
VPS16-208ENST00000487461 C8AP07357 584 aa13.39□□□□□ -0.27
VPS16-208ENST00000487461 TKTP29401 623 aaKnown RBP13.39□□□□□ -0.27
VPS16-208ENST00000487461 OR1D2P34982 312 aa13.39□□□□□ -0.27
VPS16-208ENST00000487461 BRCC3P46736 316 aa13.39□□□□□ -0.27
VPS16-208ENST00000487461 SOX4Q06945 474 aaPredicted RBP13.39□□□□□ -0.27
VPS16-208ENST00000487461 DMP1Q13316 513 aaPredicted RBP13.39□□□□□ -0.27
VPS16-208ENST00000487461 PPM1LQ5SGD2 360 aa13.39□□□□□ -0.27
VPS16-208ENST00000487461 LIN9Q5TKA1 542 aa13.39□□□□□ -0.27
VPS16-208ENST00000487461 MCTP1Q6DN14 999 aa13.39□□□□□ -0.27
VPS16-208ENST00000487461 PDXDC1Q6P996 788 aa13.39□□□□□ -0.27
VPS16-208ENST00000487461 APBB1IPQ7Z5R6 666 aaPredicted RBP13.39□□□□□ -0.27
VPS16-208ENST00000487461 C3orf58Q8NDZ4 430 aa13.39□□□□□ -0.27
VPS16-208ENST00000487461 ZBTB45Q96K62 511 aaPredicted RBP13.39□□□□□ -0.27
VPS16-208ENST00000487461 UROC1Q96N76 676 aa13.39□□□□□ -0.27
VPS16-208ENST00000487461 ZMAT2Q96NC0 199 aaKnown RBP13.39□□□□□ -0.27
VPS16-208ENST00000487461 PNMA5Q96PV4 448 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms