RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 IPO5O00410 1097 aaKnown RBP13.11□□□□□ -0.31
TRIM56-204ENST00000487252 KHNYNO15037 678 aaKnown RBP13.11□□□□□ -0.31
TRIM56-204ENST00000487252 NR1I2O75469 434 aa13.11□□□□□ -0.31
TRIM56-204ENST00000487252 SEC24BO95487 1268 aa13.11□□□□□ -0.31
TRIM56-204ENST00000487252 PSAPP07602 524 aa13.11□□□□□ -0.31
TRIM56-204ENST00000487252 SIM1P81133 766 aaPredicted RBP13.11□□□□□ -0.31
TRIM56-204ENST00000487252 RAB33AQ14088 237 aa13.11□□□□□ -0.31
TRIM56-204ENST00000487252 IMMTQ16891 758 aaKnown RBP13.11□□□□□ -0.31
TRIM56-204ENST00000487252 TEX2Q8IWB9 1127 aa13.11□□□□□ -0.31
TRIM56-204ENST00000487252 MFSD6LQ8IWD5 586 aa13.11□□□□□ -0.31
TRIM56-204ENST00000487252 CHCHD4Q8N4Q1 142 aa13.11□□□□□ -0.31
TRIM56-204ENST00000487252 GSTCDQ8NEC7 633 aa13.11□□□□□ -0.31
TRIM56-204ENST00000487252 SMARCD2Q92925 531 aa13.11□□□□□ -0.31
TRIM56-204ENST00000487252 GAD1Q99259 594 aa13.11□□□□□ -0.31
TRIM56-204ENST00000487252 BACH2Q9BYV9 841 aa13.11□□□□□ -0.31
TRIM56-204ENST00000487252 SLC32A1Q9H598 525 aa13.11□□□□□ -0.31
TRIM56-204ENST00000487252 CCDC86Q9H6F5 360 aaKnown RBP13.11□□□□□ -0.31
TRIM56-204ENST00000487252 SEC63Q9UGP8 760 aaKnown RBP13.11□□□□□ -0.31
TRIM56-204ENST00000487252 WDR27A2RRH5 827 aa13.1□□□□□ -0.31
TRIM56-204ENST00000487252 FAM86B1E9PN63 330 aa13.1□□□□□ -0.31
TRIM56-204ENST00000487252 ZNF263O14978 683 aa13.1□□□□□ -0.31
TRIM56-204ENST00000487252 RHOBTB1O94844 696 aa13.1□□□□□ -0.31
TRIM56-204ENST00000487252 FAM86B2P0C5J1 330 aa13.1□□□□□ -0.31
TRIM56-204ENST00000487252 SREBF1P36956 1147 aa13.1□□□□□ -0.31
TRIM56-204ENST00000487252 SCNN1GP51170 649 aa13.1□□□□□ -0.31
TRIM56-204ENST00000487252 ELF2Q15723 593 aa13.1□□□□□ -0.31
TRIM56-204ENST00000487252 PSMD5Q16401 504 aa13.1□□□□□ -0.31
TRIM56-204ENST00000487252 PKN3Q6P5Z2 889 aa13.1□□□□□ -0.31
TRIM56-204ENST00000487252 RALGPS2Q86X27 583 aaPredicted RBP13.1□□□□□ -0.31
TRIM56-204ENST00000487252 CNNM3Q8NE01 707 aa13.1□□□□□ -0.31
TRIM56-204ENST00000487252 SLC39A7Q92504 469 aa13.1□□□□□ -0.31
TRIM56-204ENST00000487252 TTPALQ9BTX7 342 aa13.1□□□□□ -0.31
TRIM56-204ENST00000487252 NRBP2Q9NSY0 501 aa13.1□□□□□ -0.31
TRIM56-204ENST00000487252 TBC1D22BQ9NU19 505 aa13.1□□□□□ -0.31
TRIM56-204ENST00000487252 DKK4Q9UBT3 224 aa13.1□□□□□ -0.31
TRIM56-204ENST00000487252 RAXQ9Y2V3 346 aa13.1□□□□□ -0.31
TRIM56-204ENST00000487252 PIEZO2Q9H5I5 2752 aa13.09□□□□□ -0.31
TRIM56-204ENST00000487252 ABCA7Q8IZY2 2146 aa13.09□□□□□ -0.31
TRIM56-204ENST00000487252 SPECC1L-ADORA2AF8WAN1 911 aa13.09□□□□□ -0.31
TRIM56-204ENST00000487252 MEFVO15553 781 aaPredicted RBP13.09□□□□□ -0.31
TRIM56-204ENST00000487252 PTPN2P17706 415 aa13.09□□□□□ -0.31
TRIM56-204ENST00000487252 CTHP32929 405 aa13.09□□□□□ -0.31
TRIM56-204ENST00000487252 MLH1P40692 756 aa13.09□□□□□ -0.31
TRIM56-204ENST00000487252 SOX9P48436 509 aa13.09□□□□□ -0.31
TRIM56-204ENST00000487252 IRX4P78413 519 aa13.09□□□□□ -0.31
TRIM56-204ENST00000487252 SEMA3BQ13214 749 aa13.09□□□□□ -0.31
TRIM56-204ENST00000487252 PDXDC1Q6P996 788 aa13.09□□□□□ -0.31
TRIM56-204ENST00000487252 ZNF605Q86T29 641 aa13.09□□□□□ -0.31
TRIM56-204ENST00000487252 CAMKK1Q8N5S9 505 aa13.09□□□□□ -0.31
TRIM56-204ENST00000487252 CRYGNQ8WXF5 182 aa13.09□□□□□ -0.31
TRIM56-204ENST00000487252 TCEAL4Q96EI5 215 aa13.09□□□□□ -0.31
TRIM56-204ENST00000487252 ZFP42Q96MM3 310 aa13.09□□□□□ -0.31
TRIM56-204ENST00000487252 ZSWIM3Q96MP5 696 aa13.09□□□□□ -0.31
TRIM56-204ENST00000487252 ANP32EQ9BTT0 268 aa13.09□□□□□ -0.31
TRIM56-204ENST00000487252 DSCC1Q9BVC3 393 aa13.09□□□□□ -0.31
TRIM56-204ENST00000487252 APOL6Q9BWW8 343 aa13.09□□□□□ -0.31
TRIM56-204ENST00000487252 SF3B1O75533 1304 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRIM56-204ENST00000487252 CCDC194A0A1B0GVG4 234 aa13.08□□□□□ -0.32
TRIM56-204ENST00000487252 ARHGEF37A1IGU5 675 aa13.08□□□□□ -0.32
TRIM56-204ENST00000487252 SLC38A8A6NNN8 435 aa13.08□□□□□ -0.32
TRIM56-204ENST00000487252 PATE3B3GLJ2 98 aa13.08□□□□□ -0.32
TRIM56-204ENST00000487252 ATXN7O15265 892 aaPredicted RBP13.08□□□□□ -0.32
TRIM56-204ENST00000487252 FOSP01100 380 aaPredicted RBP13.08□□□□□ -0.32
TRIM56-204ENST00000487252 ITGA4P13612 1032 aa13.08□□□□□ -0.32
TRIM56-204ENST00000487252 VIPR2P41587 438 aa13.08□□□□□ -0.32
TRIM56-204ENST00000487252 CCR2P41597 374 aa13.08□□□□□ -0.32
TRIM56-204ENST00000487252 PRKCEQ02156 737 aa13.08□□□□□ -0.32
TRIM56-204ENST00000487252 FCHO2Q0JRZ9 810 aa13.08□□□□□ -0.32
TRIM56-204ENST00000487252 ZNF423Q2M1K9 1284 aa13.08□□□□□ -0.32
TRIM56-204ENST00000487252 UAP1L1Q3KQV9 507 aa13.08□□□□□ -0.32
TRIM56-204ENST00000487252 CCNI2Q6ZMN8 369 aaPredicted RBP13.08□□□□□ -0.32
TRIM56-204ENST00000487252 PLA2G4DQ86XP0 818 aa13.08□□□□□ -0.32
TRIM56-204ENST00000487252 ZNF843Q8N446 348 aa13.08□□□□□ -0.32
TRIM56-204ENST00000487252 SRBD1Q8N5C6 995 aaKnown RBP13.08□□□□□ -0.32
TRIM56-204ENST00000487252 LSM14AQ8ND56 463 aaKnown RBP13.08□□□□□ -0.32
TRIM56-204ENST00000487252 PGBD1Q96JS3 809 aa13.08□□□□□ -0.32
TRIM56-204ENST00000487252 LZTS2Q9BRK4 669 aa13.08□□□□□ -0.32
TRIM56-204ENST00000487252 NIFKQ9BYG3 293 aaKnown RBP13.08□□□□□ -0.32
TRIM56-204ENST00000487252 ANO3Q9BYT9 981 aa13.08□□□□□ -0.32
TRIM56-204ENST00000487252 EVLQ9UI08 416 aaPredicted RBP13.08□□□□□ -0.32
TRIM56-204ENST00000487252 IPPQ9Y573 584 aa13.08□□□□□ -0.32
TRIM56-204ENST00000487252 PTPN13Q12923 2485 aa13.08□□□□□ -0.32
TRIM56-204ENST00000487252 A0A087WV48 116 aa13.07□□□□□ -0.32
TRIM56-204ENST00000487252 J3QKU1 62 aa13.07□□□□□ -0.32
TRIM56-204ENST00000487252 IFIT3O14879 490 aaKnown RBP13.07□□□□□ -0.32
TRIM56-204ENST00000487252 CHADO15335 359 aa13.07□□□□□ -0.32
TRIM56-204ENST00000487252 MOSPD3O75425 235 aa13.07□□□□□ -0.32
TRIM56-204ENST00000487252 RDXP35241 583 aaKnown RBP13.07□□□□□ -0.32
TRIM56-204ENST00000487252 FAM193AP78312 1265 aa13.07□□□□□ -0.32
TRIM56-204ENST00000487252 SPIRE1Q08AE8 756 aa13.07□□□□□ -0.32
TRIM56-204ENST00000487252 KARSQ15046 597 aaKnown RBP13.07□□□□□ -0.32
TRIM56-204ENST00000487252 CATIPQ7Z7H3 387 aa13.07□□□□□ -0.32
TRIM56-204ENST00000487252 RHPN2Q8IUC4 686 aa13.07□□□□□ -0.32
TRIM56-204ENST00000487252 KSR1Q8IVT5 923 aa13.07□□□□□ -0.32
TRIM56-204ENST00000487252 MDM1Q8TC05 714 aa13.07□□□□□ -0.32
TRIM56-204ENST00000487252 CSGALNACT1Q8TDX6 532 aa13.07□□□□□ -0.32
TRIM56-204ENST00000487252 CRELD1Q96HD1 420 aa13.07□□□□□ -0.32
TRIM56-204ENST00000487252 DCLK1O15075 740 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 ARHGAP6O43182 974 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 TADA2AO75478 443 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms