RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 PHKA2P46019 1235 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 GKAP1Q5VSY0 366 aaPredicted RBP14.1□□□□□ -0.15
HMGN1-216ENST00000486741 MARF1Q9Y4F3 1742 aaKnown RBP14.1□□□□□ -0.15
HMGN1-216ENST00000486741 NUP188Q5SRE5 1749 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 PIK3CDO00329 1044 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 SMAD1Q15797 465 aaKnown RBP14.1□□□□□ -0.15
HMGN1-216ENST00000486741 EFCAB12Q6NXP0 572 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 CCDC60Q8IWA6 550 aaPredicted RBP14.1□□□□□ -0.15
HMGN1-216ENST00000486741 MIS12Q9H081 205 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 LAMB4A4D0S4 1761 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 STRCP1A6NGW2 1772 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 MYH13Q9UKX3 1938 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 TLR2O60603 784 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 GRAP2O75791 330 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 SUPT20HL2P0C7V6 817 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 ATP11AP98196 1134 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 RUNDC3BQ96NL0 473 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 TIPINQ9BVW5 301 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 SCINQ9Y6U3 715 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 M0QYV0 167 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 PMS2P54278 862 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 MXRA7P84157 204 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 FKBP1CQ5VVH2 108 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 HNRNPLLQ8WVV9 542 aaKnown RBP14.1□□□□□ -0.15
HMGN1-216ENST00000486741 ATG4AQ8WYN0 398 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 ARHGEF26Q96DR7 871 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 AP5M1Q9H0R1 490 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 HEY1Q9Y5J3 304 aa14.1□□□□□ -0.15
HMGN1-216ENST00000486741 CASZ1Q86V15 1759 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 MYH14Q7Z406 1995 aaKnown RBP14.09□□□□□ -0.15
HMGN1-216ENST00000486741 PODXLO00592 558 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 DYNC1LI2O43237 492 aaPredicted RBP14.09□□□□□ -0.15
HMGN1-216ENST00000486741 CYP11B1P15538 503 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 DARS2Q6PI48 645 aaKnown RBP14.09□□□□□ -0.15
HMGN1-216ENST00000486741 VSIG1Q86XK7 387 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 WNT8AQ9H1J5 351 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 BRD2P25440 801 aaKnown RBP14.09□□□□□ -0.15
HMGN1-216ENST00000486741 ABCD1P33897 745 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 LRRC14Q15048 493 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 MEI1Q5TIA1 1274 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 ARL8AQ96BM9 186 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 MTMR12Q9C0I1 747 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 SLITRK6Q9H5Y7 841 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 SAYSD1Q9NPB0 183 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 AGAP1Q9UPQ3 857 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 WDR91A4D1P6 747 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 MED7O43513 233 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 MYL3P08590 195 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 TBXAS1P24557 533 aaPredicted RBP14.09□□□□□ -0.15
HMGN1-216ENST00000486741 CHRNA3P32297 505 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 GTF2H1P32780 548 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 RGS7P49802 495 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 ZRSR2Q15696 482 aaKnown RBP14.09□□□□□ -0.15
HMGN1-216ENST00000486741 PHLDB3Q6NSJ2 640 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 CHST13Q8NET6 341 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 SALL4Q9UJQ4 1053 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 PCDHB2Q9Y5E7 798 aa14.09□□□□□ -0.15
HMGN1-216ENST00000486741 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.09□□□□□ -0.15
HMGN1-216ENST00000486741 KLRG2A4D1S0 409 aaPredicted RBP14.08□□□□□ -0.15
HMGN1-216ENST00000486741 EXTL3O43909 919 aa14.08□□□□□ -0.15
HMGN1-216ENST00000486741 MYBL2P10244 700 aa14.08□□□□□ -0.15
HMGN1-216ENST00000486741 KRT17Q04695 432 aa14.08□□□□□ -0.15
HMGN1-216ENST00000486741 MYO1EQ12965 1108 aa14.08□□□□□ -0.15
HMGN1-216ENST00000486741 SETDB1Q15047 1291 aa14.08□□□□□ -0.15
HMGN1-216ENST00000486741 CYP4A22Q5TCH4 519 aa14.08□□□□□ -0.15
HMGN1-216ENST00000486741 AADACL2Q6P093 401 aa14.08□□□□□ -0.15
HMGN1-216ENST00000486741 WDR93Q6P2C0 686 aa14.08□□□□□ -0.15
HMGN1-216ENST00000486741 CROCCP2Q86T23 111 aa14.08□□□□□ -0.15
HMGN1-216ENST00000486741 FBF1Q8TES7 1133 aa14.08□□□□□ -0.15
HMGN1-216ENST00000486741 C18orf8Q96DM3 657 aa14.08□□□□□ -0.15
HMGN1-216ENST00000486741 CYFIP2Q96F07 1278 aa14.08□□□□□ -0.15
HMGN1-216ENST00000486741 KIF12Q96FN5 646 aa14.08□□□□□ -0.15
HMGN1-216ENST00000486741 MCEEQ96PE7 176 aa14.08□□□□□ -0.15
HMGN1-216ENST00000486741 GANQ9H2C0 597 aa14.08□□□□□ -0.15
HMGN1-216ENST00000486741 SNX25Q9H3E2 840 aa14.08□□□□□ -0.15
HMGN1-216ENST00000486741 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.08□□□□□ -0.15
HMGN1-216ENST00000486741 PFASO15067 1338 aa14.08□□□□□ -0.16
HMGN1-216ENST00000486741 HMGB1P1B2RPK0 211 aaPredicted RBP14.08□□□□□ -0.16
HMGN1-216ENST00000486741 PRPSAP2O60256 369 aa14.08□□□□□ -0.16
HMGN1-216ENST00000486741 RRM1P23921 792 aa14.08□□□□□ -0.16
HMGN1-216ENST00000486741 SNX16P57768 344 aa14.08□□□□□ -0.16
HMGN1-216ENST00000486741 SURF1Q15526 300 aa14.08□□□□□ -0.16
HMGN1-216ENST00000486741 SMTNL2Q2TAL5 461 aa14.08□□□□□ -0.16
HMGN1-216ENST00000486741 VSIG10LQ86VR7 867 aa14.08□□□□□ -0.16
HMGN1-216ENST00000486741 ANKRD13AQ8IZ07 590 aa14.08□□□□□ -0.16
HMGN1-216ENST00000486741 FAM153BP0C7A2 387 aa14.08□□□□□ -0.16
HMGN1-216ENST00000486741 CYP2C19P33261 490 aa14.08□□□□□ -0.16
HMGN1-216ENST00000486741 EFNA5P52803 228 aa14.08□□□□□ -0.16
HMGN1-216ENST00000486741 MRPS9P82933 396 aaKnown RBP14.08□□□□□ -0.16
HMGN1-216ENST00000486741 SLMAPQ14BN4 828 aa14.08□□□□□ -0.16
HMGN1-216ENST00000486741 FAM153CQ494X1 144 aa14.08□□□□□ -0.16
HMGN1-216ENST00000486741 ENOSF1Q7L5Y1 443 aa14.08□□□□□ -0.16
HMGN1-216ENST00000486741 JAMLQ86YT9 394 aa14.08□□□□□ -0.16
HMGN1-216ENST00000486741 KCTD17Q8N5Z5 321 aa14.08□□□□□ -0.16
HMGN1-216ENST00000486741 CCNYQ8ND76 341 aa14.08□□□□□ -0.16
HMGN1-216ENST00000486741 FAM153AQ9UHL3 310 aa14.08□□□□□ -0.16
HMGN1-216ENST00000486741 EXOC1LA0A1B0GW35 172 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 A6NJR5 290 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 TMEM132BQ14DG7 1078 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 FAM102AQ5T9C2 384 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms