RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 MRI1Q9BV20 369 aa7.08□□□□□ -1.28
LTN1-206ENST00000486427 TEX101Q9BY14 249 aa7.08□□□□□ -1.28
LTN1-206ENST00000486427 MMRN2Q9H8L6 949 aa7.08□□□□□ -1.28
LTN1-206ENST00000486427 POGKQ9P215 609 aa7.08□□□□□ -1.28
LTN1-206ENST00000486427 CHST2Q9Y4C5 530 aa7.08□□□□□ -1.28
LTN1-206ENST00000486427 PEX11BO96011 259 aa7.07□□□□□ -1.28
LTN1-206ENST00000486427 IL2RBP14784 551 aa7.07□□□□□ -1.28
LTN1-206ENST00000486427 EDNRBP24530 442 aa7.07□□□□□ -1.28
LTN1-206ENST00000486427 RNASE9P60153 205 aaKnown RBP7.07□□□□□ -1.28
LTN1-206ENST00000486427 RAP2BP61225 183 aa7.07□□□□□ -1.28
LTN1-206ENST00000486427 KLF10Q13118 480 aa7.07□□□□□ -1.28
LTN1-206ENST00000486427 PNMA8AQ86V59 439 aaPredicted RBP7.07□□□□□ -1.28
LTN1-206ENST00000486427 ZFP28Q8NHY6 868 aa7.07□□□□□ -1.28
LTN1-206ENST00000486427 SLC25A43Q8WUT9 341 aaPredicted RBP7.07□□□□□ -1.28
LTN1-206ENST00000486427 RAB24Q969Q5 203 aa7.07□□□□□ -1.28
LTN1-206ENST00000486427 MYOCQ99972 504 aa7.07□□□□□ -1.28
LTN1-206ENST00000486427 C7orf25Q9BPX7 421 aa7.07□□□□□ -1.28
LTN1-206ENST00000486427 SLC13A1Q9BZW2 595 aa7.07□□□□□ -1.28
LTN1-206ENST00000486427 MOCS1Q9NZB8 636 aa7.07□□□□□ -1.28
LTN1-206ENST00000486427 SLC23A1Q9UHI7 598 aa7.07□□□□□ -1.28
LTN1-206ENST00000486427 SERPINB13Q9UIV8 391 aa7.07□□□□□ -1.28
LTN1-206ENST00000486427 LIMCH1Q9UPQ0 1083 aa7.07□□□□□ -1.28
LTN1-206ENST00000486427 REXO2Q9Y3B8 237 aaKnown RBP7.07□□□□□ -1.28
LTN1-206ENST00000486427 MRFAP1Q9Y605 127 aa7.07□□□□□ -1.28
LTN1-206ENST00000486427 ZNF185O15231 689 aa7.06□□□□□ -1.28
LTN1-206ENST00000486427 SNRPA1P09661 255 aaKnown RBP7.06□□□□□ -1.28
LTN1-206ENST00000486427 ZSCAN20P17040 1043 aaPredicted RBP7.06□□□□□ -1.28
LTN1-206ENST00000486427 IBSPP21815 317 aaPredicted RBP7.06□□□□□ -1.28
LTN1-206ENST00000486427 GDF5P43026 501 aa7.06□□□□□ -1.28
LTN1-206ENST00000486427 CHN2P52757 468 aa7.06□□□□□ -1.28
LTN1-206ENST00000486427 ATP8B2P98198 1209 aa7.06□□□□□ -1.28
LTN1-206ENST00000486427 MTM1Q13496 603 aa7.06□□□□□ -1.28
LTN1-206ENST00000486427 C3orf36Q3SXR2 165 aa7.06□□□□□ -1.28
LTN1-206ENST00000486427 ATXN7L2Q5T6C5 722 aaPredicted RBP7.06□□□□□ -1.28
LTN1-206ENST00000486427 ZFPM1Q8IX07 1006 aa7.06□□□□□ -1.28
LTN1-206ENST00000486427 RHOT1Q8IXI2 618 aa7.06□□□□□ -1.28
LTN1-206ENST00000486427 CASKIN2Q8WXE0 1202 aa7.06□□□□□ -1.28
LTN1-206ENST00000486427 TMEM140Q9NV12 185 aa7.06□□□□□ -1.28
LTN1-206ENST00000486427 TRPM5Q9NZQ8 1165 aa7.06□□□□□ -1.28
LTN1-206ENST00000486427 ING1Q9UK53 422 aaPredicted RBP7.06□□□□□ -1.28
LTN1-206ENST00000486427 IPPQ9Y573 584 aa7.06□□□□□ -1.28
LTN1-206ENST00000486427 PCDHA13Q9Y5I0 950 aa7.06□□□□□ -1.28
LTN1-206ENST00000486427 DRGXA6NNA5 263 aa7.05□□□□□ -1.28
LTN1-206ENST00000486427 HTRA2O43464 458 aaPredicted RBP7.05□□□□□ -1.28
LTN1-206ENST00000486427 GPR32O75388 356 aa7.05□□□□□ -1.28
LTN1-206ENST00000486427 RECQL4O94761 1208 aa7.05□□□□□ -1.28
LTN1-206ENST00000486427 SLPIP03973 132 aa7.05□□□□□ -1.28
LTN1-206ENST00000486427 ATP5JP18859 108 aa7.05□□□□□ -1.28
LTN1-206ENST00000486427 MGAT1P26572 445 aa7.05□□□□□ -1.28
LTN1-206ENST00000486427 KIF23Q02241 960 aaPredicted RBP7.05□□□□□ -1.28
LTN1-206ENST00000486427 RRP12Q5JTH9 1297 aaKnown RBP7.05□□□□□ -1.28
LTN1-206ENST00000486427 FAM102AQ5T9C2 384 aaPredicted RBP7.05□□□□□ -1.28
LTN1-206ENST00000486427 OTUD7BQ6GQQ9 843 aa7.05□□□□□ -1.28
LTN1-206ENST00000486427 GDF7Q7Z4P5 450 aa7.05□□□□□ -1.28
LTN1-206ENST00000486427 COA7Q96BR5 231 aa7.05□□□□□ -1.28
LTN1-206ENST00000486427 CLIP3Q96DZ5 547 aa7.05□□□□□ -1.28
LTN1-206ENST00000486427 CYFIP2Q96F07 1278 aa7.05□□□□□ -1.28
LTN1-206ENST00000486427 NRDE2Q9H7Z3 1164 aa7.05□□□□□ -1.28
LTN1-206ENST00000486427 MANSC1Q9H8J5 431 aa7.05□□□□□ -1.28
LTN1-206ENST00000486427 RUVBL1Q9Y265 456 aaKnown RBP7.05□□□□□ -1.28
LTN1-206ENST00000486427 MYBBP1AQ9BQG0 1328 aaKnown RBP7.04□□□□□ -1.28
LTN1-206ENST00000486427 CCDC154A6NI56 674 aa7.04□□□□□ -1.28
LTN1-206ENST00000486427 ZRANB2O95218 330 aaKnown RBP eCLIP7.04□□□□□ -1.28
LTN1-206ENST00000486427 DDCP20711 480 aa7.04□□□□□ -1.28
LTN1-206ENST00000486427 ABHD18Q0P651 414 aa7.04□□□□□ -1.28
LTN1-206ENST00000486427 TARDBPQ13148 414 aaKnown RBP eCLIP7.04□□□□□ -1.28
LTN1-206ENST00000486427 IL10RAQ13651 578 aa7.04□□□□□ -1.28
LTN1-206ENST00000486427 PDCD4Q53EL6 469 aaKnown RBP7.04□□□□□ -1.28
LTN1-206ENST00000486427 EFCAB2Q5VUJ9 269 aa7.04□□□□□ -1.28
LTN1-206ENST00000486427 RHOUQ7L0Q8 258 aa7.04□□□□□ -1.28
LTN1-206ENST00000486427 PHACTR3Q96KR7 559 aa7.04□□□□□ -1.28
LTN1-206ENST00000486427 FAM193BQ96PV7 902 aaPredicted RBP7.04□□□□□ -1.28
LTN1-206ENST00000486427 DCLRE1CQ96SD1 692 aaKnown RBP7.04□□□□□ -1.28
LTN1-206ENST00000486427 FBXO34Q9NWN3 711 aa7.04□□□□□ -1.28
LTN1-206ENST00000486427 SAP30BPQ9UHR5 308 aaKnown RBP7.04□□□□□ -1.28
LTN1-206ENST00000486427 hCG_2014768A0A024R1R8 64 aa7.03□□□□□ -1.28
LTN1-206ENST00000486427 NCR1O76036 304 aa7.03□□□□□ -1.28
LTN1-206ENST00000486427 MCM7P33993 719 aa7.03□□□□□ -1.28
LTN1-206ENST00000486427 SLC16A1P53985 500 aa7.03□□□□□ -1.28
LTN1-206ENST00000486427 ZNF529Q6P280 563 aa7.03□□□□□ -1.28
LTN1-206ENST00000486427 SEM1Q6ZVN7 128 aa7.03□□□□□ -1.28
LTN1-206ENST00000486427 USP51Q70EK9 711 aa7.03□□□□□ -1.28
LTN1-206ENST00000486427 MRGPREQ86SM8 312 aa7.03□□□□□ -1.28
LTN1-206ENST00000486427 DCBLD1Q8N8Z6 715 aa7.03□□□□□ -1.28
LTN1-206ENST00000486427 STAG1Q8WVM7 1258 aa7.03□□□□□ -1.28
LTN1-206ENST00000486427 LARP4BQ92615 738 aaKnown RBP7.03□□□□□ -1.28
LTN1-206ENST00000486427 HDAC10Q969S8 669 aa7.03□□□□□ -1.28
LTN1-206ENST00000486427 SLC46A2Q9BY10 475 aa7.03□□□□□ -1.28
LTN1-206ENST00000486427 PCED1AQ9H1Q7 454 aa7.03□□□□□ -1.28
LTN1-206ENST00000486427 SRRDQ9UH36 339 aa7.03□□□□□ -1.28
LTN1-206ENST00000486427 USP15Q9Y4E8 981 aaPredicted RBP7.03□□□□□ -1.28
LTN1-206ENST00000486427 SPEF1Q9Y4P9 236 aa7.03□□□□□ -1.28
LTN1-206ENST00000486427 CYR61O00622 381 aa7.02□□□□□ -1.29
LTN1-206ENST00000486427 MAKP20794 623 aa7.02□□□□□ -1.29
LTN1-206ENST00000486427 SLC6A2P23975 617 aa7.02□□□□□ -1.29
LTN1-206ENST00000486427 CCND1P24385 295 aa7.02□□□□□ -1.29
LTN1-206ENST00000486427 UBXN2BQ14CS0 331 aa7.02□□□□□ -1.29
LTN1-206ENST00000486427 MED25Q71SY5 747 aa7.02□□□□□ -1.29
LTN1-206ENST00000486427 MIGA2Q7L4E1 593 aa7.02□□□□□ -1.29
LTN1-206ENST00000486427 UBE3BQ7Z3V4 1068 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms