RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 KYAT1Q16773 422 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 TDRD10Q5VZ19 366 aaKnown RBP12.87□□□□□ -0.35
PKP4-213ENST00000486254 TRIM72Q6ZMU5 477 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 GPR142Q7Z601 462 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 NOP9Q86U38 636 aaKnown RBP12.87□□□□□ -0.35
PKP4-213ENST00000486254 TRIM50Q86XT4 487 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 RASGEF1CQ8N431 466 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 EIF1ADQ8N9N8 165 aaKnown RBP12.87□□□□□ -0.35
PKP4-213ENST00000486254 SLC35G2Q8TBE7 412 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 DDX1Q92499 740 aaKnown RBP12.87□□□□□ -0.35
PKP4-213ENST00000486254 ZNF516Q92618 1163 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 SELENOOQ9BVL4 669 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 ABHD16BQ9H3Z7 469 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 VIPAS39Q9H9C1 493 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 PTPRHQ9HD43 1115 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 TOPORSQ9NS56 1045 aaPredicted RBP12.87□□□□□ -0.35
PKP4-213ENST00000486254 UVRAGQ9P2Y5 699 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 GTF3C4Q9UKN8 822 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 L1RE1Q9UN81 338 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 PCDHB2Q9Y5E7 798 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 DCAF8L1A6NGE4 600 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 RHOXF2BP0C7M4 288 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 POTEJP0CG39 1038 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 CHRNB2P17787 502 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 TNNI1P19237 187 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 PIK3CAP42336 1068 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 FAM193AP78312 1265 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 GPC5P78333 572 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 FMO1Q01740 532 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 DRP2Q13474 957 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 PPP2R5EQ16537 467 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 DUSP28Q4G0W2 176 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 MPZL3Q6UWV2 235 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 HDXQ7Z353 690 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 PEX26Q7Z412 305 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 RPUSD2Q8IZ73 545 aaKnown RBP12.86□□□□□ -0.35
PKP4-213ENST00000486254 USP38Q8NB14 1042 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 RNF149Q8NC42 400 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 SLC20A1Q8WUM9 679 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.86□□□□□ -0.35
PKP4-213ENST00000486254 KAT5Q92993 513 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 TRIM11Q96F44 468 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 RPS6KC1Q96S38 1066 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 POP1Q99575 1024 aaKnown RBP12.86□□□□□ -0.35
PKP4-213ENST00000486254 RHOXF2Q9BQY4 288 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 UBXN6Q9BZV1 441 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 CARD9Q9H257 536 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 FAM124BQ9H5Z6 455 aaPredicted RBP12.86□□□□□ -0.35
PKP4-213ENST00000486254 PRMT7Q9NVM4 692 aaPredicted RBP12.86□□□□□ -0.35
PKP4-213ENST00000486254 CPSF3Q9UKF6 684 aaKnown RBP12.86□□□□□ -0.35
PKP4-213ENST00000486254 TRPC6Q9Y210 931 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 TNFSF13BQ9Y275 285 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 CCDC188H7C350 402 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 CYP26A1O43174 497 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 NCK2O43639 380 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 B4GALT4O60513 344 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 SNAI1O95863 264 aaPredicted RBP12.86□□□□□ -0.35
PKP4-213ENST00000486254 CYP1A2P05177 515 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 EDN1P05305 212 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 MYBL1P10243 752 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 PHKA2P46019 1235 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 ACOT2P49753 483 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 TNNC1P63316 161 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 IQSEC1Q6DN90 963 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 PLEKHH3Q7Z736 793 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 DAAM2Q86T65 1068 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 MAML3Q96JK9 1138 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 IMPG2Q9BZV3 1241 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 EPC1Q9H2F5 836 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 PDE11AQ9HCR9 933 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 AVENQ9NQS1 362 aaPredicted RBP12.86□□□□□ -0.35
PKP4-213ENST00000486254 PDGFCQ9NRA1 345 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 ANKFY1Q9P2R3 1169 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 AMFRQ9UKV5 643 aa12.86□□□□□ -0.35
PKP4-213ENST00000486254 ANK1P16157 1881 aa12.85□□□□□ -0.35
PKP4-213ENST00000486254 PGRMC1O00264 195 aaKnown RBP12.85□□□□□ -0.35
PKP4-213ENST00000486254 TULP1O00294 542 aaPredicted RBP12.85□□□□□ -0.35
PKP4-213ENST00000486254 BUB1BO60566 1050 aaPredicted RBP12.85□□□□□ -0.35
PKP4-213ENST00000486254 IL18RAPO95256 599 aa12.85□□□□□ -0.35
PKP4-213ENST00000486254 SGPL1O95470 568 aa12.85□□□□□ -0.35
PKP4-213ENST00000486254 VNN1O95497 513 aa12.85□□□□□ -0.35
PKP4-213ENST00000486254 ASS1P00966 412 aaKnown RBP12.85□□□□□ -0.35
PKP4-213ENST00000486254 FTLP02792 175 aaPredicted RBP12.85□□□□□ -0.35
PKP4-213ENST00000486254 CLTAP09496 248 aa12.85□□□□□ -0.35
PKP4-213ENST00000486254 MARK3P27448 753 aa12.85□□□□□ -0.35
PKP4-213ENST00000486254 MBTD1Q05BQ5 628 aa12.85□□□□□ -0.35
PKP4-213ENST00000486254 CUL2Q13617 745 aa12.85□□□□□ -0.35
PKP4-213ENST00000486254 SLC47A2Q86VL8 602 aa12.85□□□□□ -0.35
PKP4-213ENST00000486254 PALB2Q86YC2 1186 aa12.85□□□□□ -0.35
PKP4-213ENST00000486254 COPS5Q92905 334 aa12.85□□□□□ -0.35
PKP4-213ENST00000486254 VCPIP1Q96JH7 1222 aa12.85□□□□□ -0.35
PKP4-213ENST00000486254 NAP1L3Q99457 506 aaPredicted RBP12.85□□□□□ -0.35
PKP4-213ENST00000486254 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.85□□□□□ -0.352e-6■■□□□ 12.6
PKP4-213ENST00000486254 TINF2Q9BSI4 451 aa12.85□□□□□ -0.35
PKP4-213ENST00000486254 C16orf70Q9BSU1 422 aa12.85□□□□□ -0.35
PKP4-213ENST00000486254 THAP2Q9H0W7 228 aa12.85□□□□□ -0.35
PKP4-213ENST00000486254 ZNF408Q9H9D4 720 aa12.85□□□□□ -0.35
PKP4-213ENST00000486254 STIM2Q9P246 746 aa12.85□□□□□ -0.35
PKP4-213ENST00000486254 EVPLQ92817 2033 aa12.84□□□□□ -0.35
PKP4-213ENST00000486254 A0A0U1RQG5 324 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms