RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-223	ENST00000485796	EXOC3	O60645	756 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	AKAP3	O75969	853 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	DDHD2	O94830	711 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	LINC00271	P0C7V0	271 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	NR2F2	P24468	414 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	GUCY2F	P51841	1108 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	SNRPF	P62306	86 aa	Known RBP	13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	ADAM9	Q13443	819 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	NAB2	Q15742	525 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	XKR4	Q5GH76	650 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	NOMO2	Q5JPE7	1267 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	SLC9A9	Q8IVB4	645 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	XXYLT1	Q8NBI6	393 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	RABGGTA	Q92696	567 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	C18orf25	Q96B23	403 aa	Predicted RBP	13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	FAM212A	Q96EL1	285 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	YME1L1	Q96TA2	773 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	RAD9A	Q99638	391 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	TMEM117	Q9H0C3	514 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	NKX2-4	Q9H2Z4	354 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	CWH43	Q9H720	699 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	TBC1D13	Q9NVG8	400 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	CGN	Q9P2M7	1197 aa	Known RBP	13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	RWDD2A	Q9UIY3	292 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	MRPL42	Q9Y6G3	142 aa	Known RBP	13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	SMIM28	A0A1B0GU29	152 aa		13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796		F8W810	466 aa		13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	INPPL1	O15357	1258 aa		13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	ERCC5	P28715	1186 aa	Predicted RBP	13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	PBX3	P40426	434 aa		13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	SOX4	Q06945	474 aa	Predicted RBP	13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	BTG3	Q14201	252 aa	Predicted RBP	13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	SNRNP35	Q16560	246 aa	Known RBP	13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	NFIL3	Q16649	462 aa		13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	CEP135	Q66GS9	1140 aa		13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	LRSAM1	Q6UWE0	723 aa		13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	GLB1L	Q6UWU2	654 aa		13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	BRSK2	Q8IWQ3	736 aa		13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	EFCAB13	Q8IY85	973 aa		13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	SP7	Q8TDD2	431 aa	Predicted RBP	13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	TMEM174	Q8WUU8	243 aa		13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	POP1	Q99575	1024 aa	Known RBP	13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	NRDE2	Q9H7Z3	1164 aa		13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	RPF1	Q9H9Y2	349 aa	Known RBP	13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	PDE11A	Q9HCR9	933 aa		13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	DNAJB4	Q9UDY4	337 aa		13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	PTPRJ	Q12913	1337 aa		13.8	□□□□□ -0.2
HDAC7-223	ENST00000485796	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	ZNF233	A6NK53	670 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	CA3	P07451	260 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	NFIC	P08651	508 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	RPL13	P26373	211 aa	Known RBP	13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	YARS	P54577	528 aa	Known RBP	13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	DLG4	P78352	724 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	LRRC63	Q05C16	580 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	CYP24A1	Q07973	514 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	TPD52L1	Q16890	204 aa	Predicted RBP	13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	EDRF1	Q3B7T1	1238 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	C1orf220	Q5T0J3	134 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	JADE1	Q6IE81	842 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	CMTR2	Q8IYT2	770 aa	Known RBP	13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	HACE1	Q8IYU2	909 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	ABI1	Q8IZP0	508 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	CCDC127	Q96BQ5	260 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	BORCS6	Q96GS4	357 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	MFSD14A	Q96MC6	490 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	PPP1R10	Q96QC0	940 aa	Known RBP	13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	PAAF1	Q9BRP4	392 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	SRRT	Q9BXP5	876 aa	Known RBP	13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	NAT10	Q9H0A0	1025 aa	Known RBP	13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	TSPY26P	Q9H489	355 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	GOLGA2P5	Q9HBQ8	144 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	UBN1	Q9NPG3	1134 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	RBAK	Q9NYW8	714 aa	Predicted RBP	13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	CNTN3	Q9P232	1028 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	TUBGCP4	Q9UGJ1	667 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	INSL6	Q9Y581	213 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	PCDHA11	Q9Y5I1	949 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	CHD9	Q3L8U1	2897 aa		13.79	□□□□□ -0.2
HDAC7-223	ENST00000485796	LINC01553	A4QN01	128 aa		13.78	□□□□□ -0.2
HDAC7-223	ENST00000485796	KIAA0391	O15091	583 aa	Known RBP	13.78	□□□□□ -0.2
HDAC7-223	ENST00000485796	CETN3	O15182	167 aa		13.78	□□□□□ -0.2
HDAC7-223	ENST00000485796	HOXA2	O43364	376 aa		13.78	□□□□□ -0.2
HDAC7-223	ENST00000485796	LDHA	P00338	332 aa	Known RBP	13.78	□□□□□ -0.2
HDAC7-223	ENST00000485796	KCNE1	P15382	129 aa		13.78	□□□□□ -0.2
HDAC7-223	ENST00000485796	ZNF445	P59923	1031 aa		13.78	□□□□□ -0.2
HDAC7-223	ENST00000485796	FKBP3	Q00688	224 aa	Known RBP	13.78	□□□□□ -0.2
HDAC7-223	ENST00000485796	MYBPC2	Q14324	1141 aa		13.78	□□□□□ -0.2
HDAC7-223	ENST00000485796	ZBTB6	Q15916	424 aa		13.78	□□□□□ -0.2
HDAC7-223	ENST00000485796	IRF2BP1	Q8IU81	584 aa		13.78	□□□□□ -0.2
HDAC7-223	ENST00000485796	CSGALNACT2	Q8N6G5	542 aa		13.78	□□□□□ -0.2
HDAC7-223	ENST00000485796	OR5B17	Q8NGF7	314 aa		13.78	□□□□□ -0.2
HDAC7-223	ENST00000485796	ZNF516	Q92618	1163 aa		13.78	□□□□□ -0.2
HDAC7-223	ENST00000485796	C17orf80	Q9BSJ5	609 aa		13.78	□□□□□ -0.2
HDAC7-223	ENST00000485796	ANP32E	Q9BTT0	268 aa		13.78	□□□□□ -0.2

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