RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 GPR19Q15760 415 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 CLUL1Q15846 466 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 ODF2Q5BJF6 829 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 LRCH2Q5VUJ6 765 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 CNSTQ6PJW8 725 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 HHIPL2Q6UWX4 724 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 PPP1R14CQ8TAE6 165 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 NSUN6Q8TEA1 469 aaKnown RBP5.01□□□□□ -1.61
RTN4-213ENST00000485749 HPS3Q969F9 1004 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 DDX11Q96FC9 970 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 RSRC1Q96IZ7 334 aaKnown RBP5.01□□□□□ -1.61
RTN4-213ENST00000485749 RADILQ96JH8 1075 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 Q96M66 194 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 RMDN3Q96TC7 470 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 MPHOSPH8Q99549 860 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 BAG1Q99933 345 aaPredicted RBP5.01□□□□□ -1.61
RTN4-213ENST00000485749 SLX1AQ9BQ83 275 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 KATNAL1Q9BW62 490 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 NAA15Q9BXJ9 866 aaKnown RBP5.01□□□□□ -1.61
RTN4-213ENST00000485749 KRTAP4-11Q9BYQ6 195 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 GPR62Q9BZJ7 368 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 SLC6A17Q9H1V8 727 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 BRD9Q9H8M2 597 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 ACSS2Q9NR19 701 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 ZNF277Q9NRM2 450 aaPredicted RBP5.01□□□□□ -1.61
RTN4-213ENST00000485749 CATSPERZQ9NTU4 200 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 H2AFY2Q9P0M6 372 aaPredicted RBP5.01□□□□□ -1.61
RTN4-213ENST00000485749 CLEC1BQ9P126 229 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 USP36Q9P275 1121 aaKnown RBP5.01□□□□□ -1.61
RTN4-213ENST00000485749 PDP2Q9P2J9 529 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 GIMAP2Q9UG22 337 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 DUSP12Q9UNI6 340 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 DNM3Q9UQ16 869 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 MTF2Q9Y483 593 aaPredicted RBP5.01□□□□□ -1.61
RTN4-213ENST00000485749 N6AMT1Q9Y5N5 214 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 SQORQ9Y6N5 450 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 CECR2Q9BXF3 1484 aa5□□□□□ -1.61
RTN4-213ENST00000485749 UNC13AQ9UPW8 1703 aa5□□□□□ -1.61
RTN4-213ENST00000485749 KIF16BQ96L93 1317 aa5□□□□□ -1.61
RTN4-213ENST00000485749 NPHP3-ACAD11A0A0J9YXS1 232 aa5□□□□□ -1.61
RTN4-213ENST00000485749 GOLGA6L10A0A0M3HER8 536 aa5□□□□□ -1.61
RTN4-213ENST00000485749 CCDC196A0A1B0GTZ2 297 aa5□□□□□ -1.61
RTN4-213ENST00000485749 LINC00854A0A1B0GVQ3 168 aa5□□□□□ -1.61
RTN4-213ENST00000485749 PRR33A8MZF0 331 aa5□□□□□ -1.61
RTN4-213ENST00000485749 AKR1B15C9JRZ8 316 aaPredicted RBP5□□□□□ -1.61
RTN4-213ENST00000485749 H7BY64 318 aa5□□□□□ -1.61
RTN4-213ENST00000485749 ZNF561-AS1K7EIQ3 104 aa5□□□□□ -1.61
RTN4-213ENST00000485749 PLOD2O00469 737 aa5□□□□□ -1.61
RTN4-213ENST00000485749 TPP1O14773 563 aa5□□□□□ -1.61
RTN4-213ENST00000485749 NDC80O14777 642 aa5□□□□□ -1.61
RTN4-213ENST00000485749 USO1O60763 962 aaKnown RBP5□□□□□ -1.61
RTN4-213ENST00000485749 PPFIA2O75334 1257 aa5□□□□□ -1.61
RTN4-213ENST00000485749 KRT38O76015 456 aa5□□□□□ -1.61
RTN4-213ENST00000485749 SASH1O94885 1247 aa5□□□□□ -1.61
RTN4-213ENST00000485749 ZNF205O95201 554 aa5□□□□□ -1.61
RTN4-213ENST00000485749 GUCA1CO95843 209 aa5□□□□□ -1.61
RTN4-213ENST00000485749 HPXP02790 462 aa5□□□□□ -1.61
RTN4-213ENST00000485749 KRT1P04264 644 aa5□□□□□ -1.61
RTN4-213ENST00000485749 CYP17A1P05093 508 aa5□□□□□ -1.61
RTN4-213ENST00000485749 MMEP08473 750 aa5□□□□□ -1.61
RTN4-213ENST00000485749 POU2F2P09086 479 aa5□□□□□ -1.61
RTN4-213ENST00000485749 INHBBP09529 407 aa5□□□□□ -1.61
RTN4-213ENST00000485749 THEGLP0DJG4 465 aa5□□□□□ -1.61
RTN4-213ENST00000485749 SFTPCP11686 197 aa5□□□□□ -1.61
RTN4-213ENST00000485749 TM4SF4P48230 202 aa5□□□□□ -1.61
RTN4-213ENST00000485749 MXI1P50539 228 aa5□□□□□ -1.61
RTN4-213ENST00000485749 RCAN1P53805 252 aa5□□□□□ -1.61
RTN4-213ENST00000485749 UBXN1Q04323 297 aa5□□□□□ -1.61
RTN4-213ENST00000485749 ZBTB16Q05516 673 aa5□□□□□ -1.61
RTN4-213ENST00000485749 BTKQ06187 659 aa5□□□□□ -1.61
RTN4-213ENST00000485749 PRPF4BQ13523 1007 aaKnown RBP5□□□□□ -1.61
RTN4-213ENST00000485749 ACAP1Q15027 740 aa5□□□□□ -1.61
RTN4-213ENST00000485749 TAF7Q15545 349 aaPredicted RBP5□□□□□ -1.61
RTN4-213ENST00000485749 ASIC2Q16515 512 aa5□□□□□ -1.61
RTN4-213ENST00000485749 CLEC16AQ2KHT3 1053 aa5□□□□□ -1.61
RTN4-213ENST00000485749 NBPF8Q3BBV2 869 aa5□□□□□ -1.61
RTN4-213ENST00000485749 CCDC152Q4G0S7 254 aa5□□□□□ -1.61
RTN4-213ENST00000485749 SLC45A4Q5BKX6 768 aa5□□□□□ -1.61
RTN4-213ENST00000485749 C10orf76Q5T2E6 689 aa5□□□□□ -1.61
RTN4-213ENST00000485749 CCDC30Q5VVM6 783 aa5□□□□□ -1.61
RTN4-213ENST00000485749 CRTC3Q6UUV7 619 aa5□□□□□ -1.61
RTN4-213ENST00000485749 SYNE3Q6ZMZ3 975 aa5□□□□□ -1.61
RTN4-213ENST00000485749 TTLL7Q6ZT98 887 aa5□□□□□ -1.61
RTN4-213ENST00000485749 RAPH1Q70E73 1250 aa5□□□□□ -1.61
RTN4-213ENST00000485749 SAPCD2Q86UD0 394 aa5□□□□□ -1.61
RTN4-213ENST00000485749 IRF2BP1Q8IU81 584 aa5□□□□□ -1.61
RTN4-213ENST00000485749 RTKN2Q8IZC4 609 aa5□□□□□ -1.61
RTN4-213ENST00000485749 MIER2Q8N344 545 aa5□□□□□ -1.61
RTN4-213ENST00000485749 LINC00116Q8NCU8 138 aa5□□□□□ -1.61
RTN4-213ENST00000485749 LILRB1Q8NHL6 650 aaPredicted RBP5□□□□□ -1.61
RTN4-213ENST00000485749 FNIP1Q8TF40 1166 aa5□□□□□ -1.61
RTN4-213ENST00000485749 JADE3Q92613 823 aa5□□□□□ -1.61
RTN4-213ENST00000485749 NCAPGQ9BPX3 1015 aa5□□□□□ -1.61
RTN4-213ENST00000485749 SLC39A3Q9BRY0 314 aa5□□□□□ -1.61
RTN4-213ENST00000485749 FSD1Q9BTV5 496 aa5□□□□□ -1.61
RTN4-213ENST00000485749 CDIP1Q9H305 208 aa5□□□□□ -1.61
RTN4-213ENST00000485749 ARFGAP3Q9NP61 516 aa5□□□□□ -1.61
RTN4-213ENST00000485749 STARD7Q9NQZ5 370 aa5□□□□□ -1.61
RTN4-213ENST00000485749 CCM2LQ9NUG4 571 aaPredicted RBP5□□□□□ -1.61
RTN4-213ENST00000485749 CALCOCO1Q9P1Z2 691 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms