RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 TNMDQ9H2S6 317 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 MARCH5Q9NX47 278 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 CACNG4Q9UBN1 327 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 ZDHHC9Q9Y397 364 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 PCDHB13Q9Y5F0 798 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 SMIM28A0A1B0GU29 152 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 GRXCR2A6NFK2 248 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 F8W810 466 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 TBX10O75333 385 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 CLTAP09496 248 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 IL9P15248 144 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 SSTR3P32745 418 aaPredicted RBP13.66□□□□□ -0.22
PTCD1-205ENST00000485746 GLUD2P49448 558 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 NUCB2P80303 420 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 COL19A1Q14993 1142 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 USP41Q3LFD5 358 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 RESP18Q5W5W9 173 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 SLFN12LQ6IEE8 588 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 FUT10Q6P4F1 479 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 STXBP4Q6ZWJ1 553 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 TAS1R1Q7RTX1 841 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 PPFIBP1Q86W92 1011 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 CEP57Q86XR8 500 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 LEO1Q8WVC0 666 aaPredicted RBP13.66□□□□□ -0.22
PTCD1-205ENST00000485746 HVCN1Q96D96 273 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 DNAJC19Q96DA6 116 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 SNX27Q96L92 541 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 UROC1Q96N76 676 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 NECAB3Q96P71 396 aaPredicted RBP13.66□□□□□ -0.22
PTCD1-205ENST00000485746 ACCSQ96QU6 501 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 APOL5Q9BWW9 433 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 VN1R3Q9BXE9 311 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 SCAND2PQ9GZW5 306 aaPredicted RBP13.66□□□□□ -0.22
PTCD1-205ENST00000485746 CXCL16Q9H2A7 254 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 RPF1Q9H9Y2 349 aaKnown RBP13.66□□□□□ -0.22
PTCD1-205ENST00000485746 MAGEF1Q9HAY2 307 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 KCNH3Q9ULD8 1083 aa13.66□□□□□ -0.22
PTCD1-205ENST00000485746 SF3B1O75533 1304 aaKnown RBP eCLIP13.65□□□□□ -0.22
PTCD1-205ENST00000485746 KIAA1671Q9BY89 1806 aa13.65□□□□□ -0.22
PTCD1-205ENST00000485746 ABLIM1O14639 778 aa13.65□□□□□ -0.22
PTCD1-205ENST00000485746 OGTO15294 1046 aa13.65□□□□□ -0.22
PTCD1-205ENST00000485746 MBTPS2O43462 519 aa13.65□□□□□ -0.22
PTCD1-205ENST00000485746 AFMP43652 599 aa13.65□□□□□ -0.22
PTCD1-205ENST00000485746 RBM10P98175 930 aaKnown RBP13.65□□□□□ -0.22
PTCD1-205ENST00000485746 PPP2R3AQ06190 1150 aa13.65□□□□□ -0.22
PTCD1-205ENST00000485746 ELAVL2Q12926 359 aaKnown RBP13.65□□□□□ -0.22
PTCD1-205ENST00000485746 SMAD4Q13485 552 aaKnown RBP13.65□□□□□ -0.22
PTCD1-205ENST00000485746 ALCAMQ13740 583 aa13.65□□□□□ -0.22
PTCD1-205ENST00000485746 PTPN14Q15678 1187 aa13.65□□□□□ -0.22
PTCD1-205ENST00000485746 ADALQ6DHV7 355 aa13.65□□□□□ -0.22
PTCD1-205ENST00000485746 ANKRD54Q6NXT1 300 aa13.65□□□□□ -0.22
PTCD1-205ENST00000485746 DCLRE1AQ6PJP8 1040 aa13.65□□□□□ -0.22
PTCD1-205ENST00000485746 MAP4K3Q8IVH8 894 aa13.65□□□□□ -0.22
PTCD1-205ENST00000485746 NOC3LQ8WTT2 800 aaKnown RBP13.65□□□□□ -0.22
PTCD1-205ENST00000485746 RIN2Q8WYP3 895 aaPredicted RBP13.65□□□□□ -0.22
PTCD1-205ENST00000485746 DDX27Q96GQ7 796 aaKnown RBP13.65□□□□□ -0.22
PTCD1-205ENST00000485746 KLHL5Q96PQ7 755 aa13.65□□□□□ -0.22
PTCD1-205ENST00000485746 PPP1R10Q96QC0 940 aaKnown RBP13.65□□□□□ -0.22
PTCD1-205ENST00000485746 PAAF1Q9BRP4 392 aa13.65□□□□□ -0.22
PTCD1-205ENST00000485746 GPR62Q9BZJ7 368 aa13.65□□□□□ -0.22
PTCD1-205ENST00000485746 ST6GALNAC4Q9H4F1 302 aa13.65□□□□□ -0.22
PTCD1-205ENST00000485746 CLEC1BQ9P126 229 aa13.65□□□□□ -0.22
PTCD1-205ENST00000485746 CDH23Q9H251 3354 aa13.65□□□□□ -0.23
PTCD1-205ENST00000485746 ANKRD63C9JTQ0 380 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 TNFRSF10AO00220 468 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 TRAPPC3O43617 180 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 B3GAT3O94766 335 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 KIF4AO95239 1232 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 GLP2RO95838 553 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 PIGRP01833 764 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 CXCL8P10145 99 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 HOXB8P17481 243 aaPredicted RBP13.64□□□□□ -0.23
PTCD1-205ENST00000485746 CLCNKBP51801 687 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 COASYQ13057 564 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 POSTNQ15063 836 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 E2F4Q16254 413 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 SLC10A6Q3KNW5 377 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 L1TD1Q5T7N2 865 aaKnown RBP13.64□□□□□ -0.23
PTCD1-205ENST00000485746 FAM171A1Q5VUB5 890 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 ELMSAN1Q6PJG2 1045 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 ALKAL1Q6UXT8 129 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 VN1R2Q8NFZ6 395 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 POMGNT1Q8WZA1 660 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 KIF12Q96FN5 646 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 CHAMP1Q96JM3 812 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 MSLNLQ96KJ4 702 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 B3GALT6Q96L58 329 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 FIZ1Q96SL8 496 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 PLEKHA5Q9HAU0 1116 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 GOLGA2P5Q9HBQ8 144 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 KBTBD4Q9NVX7 518 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 CNTN3Q9P232 1028 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 HCFC2Q9Y5Z7 792 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 IRAK3Q9Y616 596 aa13.64□□□□□ -0.23
PTCD1-205ENST00000485746 A0A0B4J269 797 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 A0A1B0GVL5 298 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 GOLGA6L4A6NEF3 574 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 LACTBL1A8MY62 500 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 PODXLO00592 558 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 XPOTO43592 962 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms