RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 LRRC27Q9C0I9 530 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 GOLGA2P5Q9HBQ8 144 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 NGRNQ9NPE2 291 aaKnown RBP17.74■□□□□ 0.43
DDR1-246ENST00000485023 SEL1LQ9UBV2 794 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 TDRD15B5MCY1 1934 aaKnown RBP17.74■□□□□ 0.43
DDR1-246ENST00000485023 SPTBN5Q9NRC6 3674 aaKnown RBP17.74■□□□□ 0.43
DDR1-246ENST00000485023 FRMD3A2A2Y4 597 aa17.73■□□□□ 0.43
DDR1-246ENST00000485023 CARNS1A5YM72 827 aa17.73■□□□□ 0.43
DDR1-246ENST00000485023 C2CD2LO14523 706 aa17.73■□□□□ 0.43
DDR1-246ENST00000485023 MEFVO15553 781 aaPredicted RBP17.73■□□□□ 0.43
DDR1-246ENST00000485023 CXCL14O95715 111 aa17.73■□□□□ 0.43
DDR1-246ENST00000485023 PIGRP01833 764 aa17.73■□□□□ 0.43
DDR1-246ENST00000485023 CXCL8P10145 99 aa17.73■□□□□ 0.43
DDR1-246ENST00000485023 SCP2P22307 547 aa17.73■□□□□ 0.43
DDR1-246ENST00000485023 CMA1P23946 247 aa17.73■□□□□ 0.43
DDR1-246ENST00000485023 TNFSF9P41273 254 aa17.73■□□□□ 0.43
DDR1-246ENST00000485023 AMPD3Q01432 767 aa17.73■□□□□ 0.43
DDR1-246ENST00000485023 SPAG1Q07617 926 aa17.73■□□□□ 0.43
DDR1-246ENST00000485023 HSP90AA2PQ14568 343 aaPredicted RBP17.73■□□□□ 0.43
DDR1-246ENST00000485023 NAB2Q15742 525 aa17.73■□□□□ 0.43
DDR1-246ENST00000485023 TJAP1Q5JTD0 557 aa17.73■□□□□ 0.43
DDR1-246ENST00000485023 PDE12Q6L8Q7 609 aaKnown RBP17.73■□□□□ 0.43
DDR1-246ENST00000485023 TAS1R1Q7RTX1 841 aa17.73■□□□□ 0.43
DDR1-246ENST00000485023 FSIP1Q8NA03 581 aa17.73■□□□□ 0.43
DDR1-246ENST00000485023 GLIS3Q8NEA6 775 aa17.73■□□□□ 0.43
DDR1-246ENST00000485023 COLEC11Q9BWP8 271 aa17.73■□□□□ 0.43
DDR1-246ENST00000485023 ST6GALNAC4Q9H4F1 302 aa17.73■□□□□ 0.43
DDR1-246ENST00000485023 BARX2Q9UMQ3 279 aaPredicted RBP17.73■□□□□ 0.43
DDR1-246ENST00000485023 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.72■□□□□ 0.43
DDR1-246ENST00000485023 SMIM28A0A1B0GU29 152 aa17.72■□□□□ 0.43
DDR1-246ENST00000485023 C2orf71A6NGG8 1288 aa17.72■□□□□ 0.43
DDR1-246ENST00000485023 TULP1O00294 542 aaPredicted RBP17.72■□□□□ 0.43
DDR1-246ENST00000485023 ACTN4O43707 911 aaKnown RBP17.72■□□□□ 0.43
DDR1-246ENST00000485023 PPP1R37O75864 691 aa17.72■□□□□ 0.43
DDR1-246ENST00000485023 PRPF6O94906 941 aaKnown RBP17.72■□□□□ 0.43
DDR1-246ENST00000485023 KIF4AO95239 1232 aa17.72■□□□□ 0.43
DDR1-246ENST00000485023 CTSAP10619 480 aa17.72■□□□□ 0.43
DDR1-246ENST00000485023 ANP32AP39687 249 aaKnown RBP17.72■□□□□ 0.43
DDR1-246ENST00000485023 CUL4BQ13620 913 aa17.72■□□□□ 0.43
DDR1-246ENST00000485023 DUSP6Q16828 381 aa17.72■□□□□ 0.43
DDR1-246ENST00000485023 AAK1Q2M2I8 961 aa17.72■□□□□ 0.43
DDR1-246ENST00000485023 MRPL43Q8N983 215 aaKnown RBP17.72■□□□□ 0.43
DDR1-246ENST00000485023 TMEM87AQ8NBN3 555 aa17.72■□□□□ 0.43
DDR1-246ENST00000485023 VN1R2Q8NFZ6 395 aa17.72■□□□□ 0.43
DDR1-246ENST00000485023 KCNN1Q92952 543 aa17.72■□□□□ 0.43
DDR1-246ENST00000485023 ZMAT2Q96NC0 199 aaKnown RBP17.72■□□□□ 0.43
DDR1-246ENST00000485023 PPP1R10Q96QC0 940 aaKnown RBP17.72■□□□□ 0.43
DDR1-246ENST00000485023 MAGEF1Q9HAY2 307 aa17.72■□□□□ 0.43
DDR1-246ENST00000485023 OLFML3Q9NRN5 406 aa17.72■□□□□ 0.43
DDR1-246ENST00000485023 TADA2AO75478 443 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 GLP2RO95838 553 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 URODP06132 367 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 ABCD1P33897 745 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 LTBRP36941 435 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 NDUFA8P51970 172 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 SOX4Q06945 474 aaPredicted RBP17.71■□□□□ 0.43
DDR1-246ENST00000485023 BMS1Q14692 1282 aaKnown RBP17.71■□□□□ 0.43
DDR1-246ENST00000485023 COL19A1Q14993 1142 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 PTPN14Q15678 1187 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 CTC1Q2NKJ3 1217 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 SLC10A6Q3KNW5 377 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 L1TD1Q5T7N2 865 aaKnown RBP17.71■□□□□ 0.43
DDR1-246ENST00000485023 FUT10Q6P4F1 479 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 SYCP3Q8IZU3 236 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 TMEM130Q8N3G9 435 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 EFHBQ8N7U6 833 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 C18orf25Q96B23 403 aaPredicted RBP17.71■□□□□ 0.43
DDR1-246ENST00000485023 HVCN1Q96D96 273 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 FAM212AQ96EL1 285 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 ACCSQ96QU6 501 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 C7orf25Q9BPX7 421 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 PYM1Q9BRP8 204 aaKnown RBP17.71■□□□□ 0.43
DDR1-246ENST00000485023 HERC2P3Q9BVR0 1158 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 GPR62Q9BZJ7 368 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 GOLPH3LQ9H4A5 285 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 ADAM28Q9UKQ2 775 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 HPSEQ9Y251 543 aa17.71■□□□□ 0.43
DDR1-246ENST00000485023 MYO7AQ13402 2215 aa17.7■□□□□ 0.42
DDR1-246ENST00000485023 OGTO15294 1046 aa17.7■□□□□ 0.42
DDR1-246ENST00000485023 NCK2O43639 380 aa17.7■□□□□ 0.42
DDR1-246ENST00000485023 SOD2P04179 222 aa17.7■□□□□ 0.42
DDR1-246ENST00000485023 CLTAP09496 248 aa17.7■□□□□ 0.42
DDR1-246ENST00000485023 SLFN14P0C7P3 912 aa17.7■□□□□ 0.42
DDR1-246ENST00000485023 IGFBP6P24592 240 aaPredicted RBP17.7■□□□□ 0.42
DDR1-246ENST00000485023 SYKP43405 635 aa17.7■□□□□ 0.42
DDR1-246ENST00000485023 CLCNKBP51801 687 aa17.7■□□□□ 0.42
DDR1-246ENST00000485023 ADAM15Q13444 863 aa17.7■□□□□ 0.42
DDR1-246ENST00000485023 ALKAL1Q6UXT8 129 aa17.7■□□□□ 0.42
DDR1-246ENST00000485023 NOC3LQ8WTT2 800 aaKnown RBP17.7■□□□□ 0.42
DDR1-246ENST00000485023 PAGE5Q96GU1 130 aa17.7■□□□□ 0.42
DDR1-246ENST00000485023 NECAB3Q96P71 396 aaPredicted RBP17.7■□□□□ 0.42
DDR1-246ENST00000485023 STRA6Q9BX79 667 aa17.7■□□□□ 0.42
DDR1-246ENST00000485023 CNTN3Q9P232 1028 aa17.7■□□□□ 0.42
DDR1-246ENST00000485023 TUBGCP4Q9UGJ1 667 aa17.7■□□□□ 0.42
DDR1-246ENST00000485023 EXOC7Q9UPT5 735 aa17.7■□□□□ 0.42
DDR1-246ENST00000485023 PCDHB13Q9Y5F0 798 aa17.7■□□□□ 0.42
DDR1-246ENST00000485023 A0A0B4J269 797 aa17.69■□□□□ 0.42
DDR1-246ENST00000485023 FAM189A1O60320 539 aa17.69■□□□□ 0.42
DDR1-246ENST00000485023 CLASP2O75122 1294 aaKnown RBP17.69■□□□□ 0.42
DDR1-246ENST00000485023 GLUD2P49448 558 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms