RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 EFHBQ8N7U6 833 aa20.9■□□□□ 0.94
SNX17-206ENST00000484886 MRPL43Q8N983 215 aaKnown RBP20.9■□□□□ 0.94
SNX17-206ENST00000484886 KCNN1Q92952 543 aa20.9■□□□□ 0.94
SNX17-206ENST00000484886 SNX27Q96L92 541 aa20.9■□□□□ 0.94
SNX17-206ENST00000484886 ACCSQ96QU6 501 aa20.9■□□□□ 0.94
SNX17-206ENST00000484886 CDCA3Q99618 268 aaPredicted RBP20.9■□□□□ 0.94
SNX17-206ENST00000484886 VN1R3Q9BXE9 311 aa20.9■□□□□ 0.94
SNX17-206ENST00000484886 TRIM9Q9C026 710 aa20.9■□□□□ 0.94
SNX17-206ENST00000484886 EXOC7Q9UPT5 735 aa20.9■□□□□ 0.94
SNX17-206ENST00000484886 PCDHB13Q9Y5F0 798 aa20.9■□□□□ 0.94
SNX17-206ENST00000484886 CITO14578 2027 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 TRIP11Q15643 1979 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 SMIM28A0A1B0GU29 152 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 FSD2A1L4K1 749 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 FRMD3A2A2Y4 597 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 URODP06132 367 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 SRGAP2BP0DMP2 458 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 CTSAP10619 480 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 ANP32AP39687 249 aaKnown RBP20.89■□□□□ 0.93
SNX17-206ENST00000484886 ADAM15Q13444 863 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 KYAT1Q16773 422 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 KIAA1841Q6NSI8 718 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 LLGL2Q6P1M3 1020 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 STXBP4Q6ZWJ1 553 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 SYCP3Q8IZU3 236 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 HASPINQ8TF76 798 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 PPP1R10Q96QC0 940 aaKnown RBP20.89■□□□□ 0.93
SNX17-206ENST00000484886 PAAF1Q9BRP4 392 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 HAPLN2Q9GZV7 340 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 BLZF1Q9H2G9 400 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 OLFML3Q9NRN5 406 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 SERTAD1Q9UHV2 236 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 ADAM28Q9UKQ2 775 aa20.89■□□□□ 0.93
SNX17-206ENST00000484886 ANKRD63C9JTQ0 380 aa20.88■□□□□ 0.93
SNX17-206ENST00000484886 C2CD2LO14523 706 aa20.88■□□□□ 0.93
SNX17-206ENST00000484886 SOD2P04179 222 aa20.88■□□□□ 0.93
SNX17-206ENST00000484886 CLTAP09496 248 aa20.88■□□□□ 0.93
SNX17-206ENST00000484886 CXCL8P10145 99 aa20.88■□□□□ 0.93
SNX17-206ENST00000484886 MYBP10242 640 aa20.88■□□□□ 0.93
SNX17-206ENST00000484886 ALCAMQ13740 583 aa20.88■□□□□ 0.93
SNX17-206ENST00000484886 COL19A1Q14993 1142 aa20.88■□□□□ 0.93
SNX17-206ENST00000484886 CTC1Q2NKJ3 1217 aa20.88■□□□□ 0.93
SNX17-206ENST00000484886 LEXMQ3ZCV2 418 aa20.88■□□□□ 0.93
SNX17-206ENST00000484886 L1TD1Q5T7N2 865 aaKnown RBP20.88■□□□□ 0.93
SNX17-206ENST00000484886 FSIP1Q8NA03 581 aa20.88■□□□□ 0.93
SNX17-206ENST00000484886 C7orf25Q9BPX7 421 aa20.88■□□□□ 0.93
SNX17-206ENST00000484886 HERC2P3Q9BVR0 1158 aa20.88■□□□□ 0.93
SNX17-206ENST00000484886 MRPL17Q9NRX2 175 aaKnown RBP20.88■□□□□ 0.93
SNX17-206ENST00000484886 SLC38A7Q9NVC3 462 aa20.88■□□□□ 0.93
SNX17-206ENST00000484886 UNC80Q8N2C7 3258 aa20.88■□□□□ 0.93
SNX17-206ENST00000484886 GOLGA6L4A6NEF3 574 aa20.87■□□□□ 0.93
SNX17-206ENST00000484886 TISP43B9A030 160 aa20.87■□□□□ 0.93
SNX17-206ENST00000484886 TULP1O00294 542 aaPredicted RBP20.87■□□□□ 0.93
SNX17-206ENST00000484886 OGTO15294 1046 aa20.87■□□□□ 0.93
SNX17-206ENST00000484886 TBX10O75333 385 aa20.87■□□□□ 0.93
SNX17-206ENST00000484886 SLFN14P0C7P3 912 aa20.87■□□□□ 0.93
SNX17-206ENST00000484886 CASP1P29466 404 aa20.87■□□□□ 0.93
SNX17-206ENST00000484886 TNFSF9P41273 254 aa20.87■□□□□ 0.93
SNX17-206ENST00000484886 CASP5P51878 434 aa20.87■□□□□ 0.93
SNX17-206ENST00000484886 PPP2R3AQ06190 1150 aa20.87■□□□□ 0.93
SNX17-206ENST00000484886 DLX2Q07687 328 aaPredicted RBP20.87■□□□□ 0.93
SNX17-206ENST00000484886 PTPN14Q15678 1187 aa20.87■□□□□ 0.93
SNX17-206ENST00000484886 SLFN12LQ6IEE8 588 aa20.87■□□□□ 0.93
SNX17-206ENST00000484886 FUT10Q6P4F1 479 aa20.87■□□□□ 0.93
SNX17-206ENST00000484886 SLC39A4Q6P5W5 647 aa20.87■□□□□ 0.93
SNX17-206ENST00000484886 ALKAL1Q6UXT8 129 aa20.87■□□□□ 0.93
SNX17-206ENST00000484886 GRAMD1CQ8IYS0 662 aa20.87■□□□□ 0.93
SNX17-206ENST00000484886 POMGNT1Q8WZA1 660 aa20.87■□□□□ 0.93
SNX17-206ENST00000484886 FAM212AQ96EL1 285 aa20.87■□□□□ 0.93
SNX17-206ENST00000484886 RPF1Q9H9Y2 349 aaKnown RBP20.87■□□□□ 0.93
SNX17-206ENST00000484886 GOLGA2P5Q9HBQ8 144 aa20.87■□□□□ 0.93
SNX17-206ENST00000484886 CNTN3Q9P232 1028 aa20.87■□□□□ 0.93
SNX17-206ENST00000484886 BARX2Q9UMQ3 279 aaPredicted RBP20.87■□□□□ 0.93
SNX17-206ENST00000484886 SF3B1O75533 1304 aaKnown RBP eCLIP20.86■□□□□ 0.93
SNX17-206ENST00000484886 A0A0B4J269 797 aa20.86■□□□□ 0.93
SNX17-206ENST00000484886 PPP1R37O75864 691 aa20.86■□□□□ 0.93
SNX17-206ENST00000484886 PRPF6O94906 941 aaKnown RBP20.86■□□□□ 0.93
SNX17-206ENST00000484886 KIF4AO95239 1232 aa20.86■□□□□ 0.93
SNX17-206ENST00000484886 LTBRP36941 435 aa20.86■□□□□ 0.93
SNX17-206ENST00000484886 SYKP43405 635 aa20.86■□□□□ 0.93
SNX17-206ENST00000484886 GLUD2P49448 558 aa20.86■□□□□ 0.93
SNX17-206ENST00000484886 RBM10P98175 930 aaKnown RBP20.86■□□□□ 0.93
SNX17-206ENST00000484886 KCNA1Q09470 495 aa20.86■□□□□ 0.93
SNX17-206ENST00000484886 NAB2Q15742 525 aa20.86■□□□□ 0.93
SNX17-206ENST00000484886 SLC10A6Q3KNW5 377 aa20.86■□□□□ 0.93
SNX17-206ENST00000484886 PTCRAQ6ISU1 281 aaPredicted RBP20.86■□□□□ 0.93
SNX17-206ENST00000484886 TAS1R1Q7RTX1 841 aa20.86■□□□□ 0.93
SNX17-206ENST00000484886 ADAMTS19Q8TE59 1207 aa20.86■□□□□ 0.93
SNX17-206ENST00000484886 HPS3Q969F9 1004 aa20.86■□□□□ 0.93
SNX17-206ENST00000484886 B3GALT6Q96L58 329 aa20.86■□□□□ 0.93
SNX17-206ENST00000484886 UROC1Q96N76 676 aa20.86■□□□□ 0.93
SNX17-206ENST00000484886 ZMAT2Q96NC0 199 aaKnown RBP20.86■□□□□ 0.93
SNX17-206ENST00000484886 EMILIN2Q9BXX0 1053 aa20.86■□□□□ 0.93
SNX17-206ENST00000484886 FGFBP2Q9BYJ0 223 aa20.86■□□□□ 0.93
SNX17-206ENST00000484886 IKZF4Q9H2S9 585 aa20.86■□□□□ 0.93
SNX17-206ENST00000484886 USP25Q9UHP3 1055 aa20.86■□□□□ 0.93
SNX17-206ENST00000484886 SSX2IPQ9Y2D8 614 aa20.86■□□□□ 0.93
SNX17-206ENST00000484886 TCF20Q9UGU0 1960 aaKnown RBP20.85■□□□□ 0.93
SNX17-206ENST00000484886 A0A1W2PQ27 194 aa20.85■□□□□ 0.93
SNX17-206ENST00000484886 A0A1W2PQ64 194 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms