RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 CEP95Q96GE4 821 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 ZNRF3Q9ULT6 936 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 ARHGAP26Q9UNA1 814 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 XPAP23025 273 aaPredicted RBP15.99■□□□□ 0.15
RXRA-203ENST00000484822 ARSEP51690 589 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 ATXN3P54252 364 aaPredicted RBP15.99■□□□□ 0.15
RXRA-203ENST00000484822 TSSK1BQ9BXA7 367 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 TMEM120BA0PK00 339 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 TRIM49P0CI25 452 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 TRIM49CP0CI26 452 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 NFKBIAP25963 317 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 NR1I3Q14994 352 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 RHPN2Q8IUC4 686 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 NEDD1Q8NHV4 660 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 SLC16A10Q8TF71 515 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 ADNPQ9H2P0 1102 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.98■□□□□ 0.15
RXRA-203ENST00000484822 SENP1Q9P0U3 644 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 ALCAMQ13740 583 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 GRM4Q14833 912 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 AGBL2Q5U5Z8 902 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 SLC44A5Q8NCS7 719 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 HPS3Q969F9 1004 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 INTS2Q9H0H0 1204 aaKnown RBP15.98■□□□□ 0.15
RXRA-203ENST00000484822 RANBP17Q9H2T7 1088 aaKnown RBP15.98■□□□□ 0.15
RXRA-203ENST00000484822 K7ERI5 159 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 HLA-DPA1P20036 260 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 SGMS1Q86VZ5 419 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 CATSPER1Q8NEC5 780 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 SPDYE1Q8NFV5 336 aaPredicted RBP15.98■□□□□ 0.15
RXRA-203ENST00000484822 HNRNPLLQ8WVV9 542 aaKnown RBP15.98■□□□□ 0.15
RXRA-203ENST00000484822 WRNIP1Q96S55 665 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 SLC12A6Q9UHW9 1150 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 MEGF6O75095 1541 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 HNRNPCL2B2RXH8 293 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 GALNT4Q8N4A0 578 aa15.98■□□□□ 0.15
RXRA-203ENST00000484822 RICTORQ6R327 1708 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 NSUN2Q08J23 767 aaKnown RBP eCLIP15.97■□□□□ 0.15
RXRA-203ENST00000484822 NAIF1Q69YI7 327 aaPredicted RBP15.97■□□□□ 0.15
RXRA-203ENST00000484822 RHOT1Q8IXI2 618 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 EME1Q96AY2 570 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 ALKBH8Q96BT7 664 aaKnown RBP15.97■□□□□ 0.15
RXRA-203ENST00000484822 TFR2Q9UP52 801 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 SATB2Q9UPW6 733 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 B2RBV5 119 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 NMT2O60551 498 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 CRYMQ14894 314 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 SLC44A4Q53GD3 710 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 STOX1Q6ZVD7 989 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 DEAF1O75398 565 aaPredicted RBP15.97■□□□□ 0.15
RXRA-203ENST00000484822 KRT8P05787 483 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 SLC18A3Q16572 532 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 HIF1AQ16665 826 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 ATXN7L3BQ96GX2 97 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 ACAP3Q96P50 834 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 PPP1R16BQ96T49 567 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 SMG5Q9UPR3 1016 aaKnown RBP15.97■□□□□ 0.15
RXRA-203ENST00000484822 C12orf60Q5U649 245 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 STYK1Q6J9G0 422 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 BTNL9Q6UXG8 535 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 CNPY4Q8N129 248 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.97■□□□□ 0.156e-7■■■■■ 67.8
RXRA-203ENST00000484822 NAF1Q96HR8 494 aaKnown RBP15.97■□□□□ 0.15
RXRA-203ENST00000484822 L2HGDHQ9H9P8 463 aa15.97■□□□□ 0.15
RXRA-203ENST00000484822 GEMIN8Q9NWZ8 242 aaKnown RBP15.97■□□□□ 0.15
RXRA-203ENST00000484822 FBXO2Q9UK22 296 aaPredicted RBP15.97■□□□□ 0.15
RXRA-203ENST00000484822 CPSF3Q9UKF6 684 aaKnown RBP15.97■□□□□ 0.15
RXRA-203ENST00000484822 ARHGEF28Q8N1W1 1705 aaKnown RBP15.97■□□□□ 0.15
RXRA-203ENST00000484822 FAM47DPA6NHR8 397 aa15.96■□□□□ 0.15
RXRA-203ENST00000484822 ADCY3O60266 1144 aa15.96■□□□□ 0.15
RXRA-203ENST00000484822 ATP6V1B1P15313 513 aa15.96■□□□□ 0.15
RXRA-203ENST00000484822 H2AFXP16104 143 aaPredicted RBP15.96■□□□□ 0.15
RXRA-203ENST00000484822 IL10P22301 178 aa15.96■□□□□ 0.15
RXRA-203ENST00000484822 RAP1GDS1P52306 607 aa15.96■□□□□ 0.15
RXRA-203ENST00000484822 DNAL1Q4LDG9 190 aa15.96■□□□□ 0.15
RXRA-203ENST00000484822 FASTKD5Q7L8L6 764 aaKnown RBP15.96■□□□□ 0.15
RXRA-203ENST00000484822 THNSL1Q8IYQ7 743 aa15.96■□□□□ 0.15
RXRA-203ENST00000484822 RBM15Q96T37 977 aaKnown RBP eCLIP15.96■□□□□ 0.15
RXRA-203ENST00000484822 USP17L10C9JJH3 530 aa15.96■□□□□ 0.15
RXRA-203ENST00000484822 XPO1O14980 1071 aaKnown RBP15.96■□□□□ 0.15
RXRA-203ENST00000484822 GGPS1O95749 300 aa15.96■□□□□ 0.15
RXRA-203ENST00000484822 SMARCA1P28370 1054 aa15.96■□□□□ 0.15
RXRA-203ENST00000484822 CPA2P48052 419 aa15.96■□□□□ 0.15
RXRA-203ENST00000484822 SLC9A2Q9UBY0 812 aa15.96■□□□□ 0.15
RXRA-203ENST00000484822 ZHX2Q9Y6X8 837 aa15.96■□□□□ 0.15
RXRA-203ENST00000484822 PSMD14O00487 310 aa15.96■□□□□ 0.15
RXRA-203ENST00000484822 SRGAP2CP0DJJ0 459 aa15.96■□□□□ 0.15
RXRA-203ENST00000484822 SYCP2LQ5T4T6 812 aa15.96■□□□□ 0.15
RXRA-203ENST00000484822 RWDD4Q6NW29 188 aaKnown RBP15.96■□□□□ 0.15
RXRA-203ENST00000484822 INTS5Q6P9B9 1019 aaKnown RBP15.96■□□□□ 0.15
RXRA-203ENST00000484822 SCG3Q8WXD2 468 aaKnown RBP15.96■□□□□ 0.15
RXRA-203ENST00000484822 POTEFA5A3E0 1075 aa15.96■□□□□ 0.14
RXRA-203ENST00000484822 ANP32DO95626 131 aa15.96■□□□□ 0.14
RXRA-203ENST00000484822 POTEIP0CG38 1075 aa15.96■□□□□ 0.14
RXRA-203ENST00000484822 FDX1P10109 184 aa15.96■□□□□ 0.14
RXRA-203ENST00000484822 ENO3P13929 434 aaPredicted RBP15.96■□□□□ 0.14
RXRA-203ENST00000484822 SCP2P22307 547 aa15.96■□□□□ 0.14
RXRA-203ENST00000484822 RFX5P48382 616 aaPredicted RBP15.96■□□□□ 0.14
RXRA-203ENST00000484822 PAPOLAP51003 745 aaKnown RBP15.96■□□□□ 0.14
RXRA-203ENST00000484822 POTEGQ6S5H5 508 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms