RNA–Protein interactions for RNA: ENST00000484330.5

ERCC8-206, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 3

Gene ERCC8, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-206ENST00000484330 HTR3DQ70Z44 454 aa4.12□□□□□ -1.75
ERCC8-206ENST00000484330 REPS2Q8NFH8 660 aa4.12□□□□□ -1.75
ERCC8-206ENST00000484330 NLGN4YQ8NFZ3 816 aaPredicted RBP4.12□□□□□ -1.75
ERCC8-206ENST00000484330 OR52N2Q8NGI0 321 aa4.12□□□□□ -1.75
ERCC8-206ENST00000484330 DCLRE1CQ96SD1 692 aaKnown RBP4.12□□□□□ -1.75
ERCC8-206ENST00000484330 CALCOCO1Q9P1Z2 691 aa4.12□□□□□ -1.75
ERCC8-206ENST00000484330 ZNF180Q9UJW8 692 aa4.12□□□□□ -1.75
ERCC8-206ENST00000484330 AJAP1Q9UKB5 411 aaPredicted RBP4.12□□□□□ -1.75
ERCC8-206ENST00000484330 POLHQ9Y253 713 aa4.12□□□□□ -1.75
ERCC8-206ENST00000484330 IPPQ9Y573 584 aa4.12□□□□□ -1.75
ERCC8-206ENST00000484330 MYBBP1AQ9BQG0 1328 aaKnown RBP4.12□□□□□ -1.75
ERCC8-206ENST00000484330 CXorf49A8MYA2 514 aaPredicted RBP4.11□□□□□ -1.75
ERCC8-206ENST00000484330 TRIM24O15164 1050 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 SLC16A6O15403 523 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 AKAP10O43572 662 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 RFPL1O75677 317 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 POMCP01189 267 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 AMHP03971 560 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 HMGB1P09429 215 aaKnown RBP4.11□□□□□ -1.75
ERCC8-206ENST00000484330 SPATA31D3P0C874 917 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 PF4V1P10720 104 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 HK1P19367 917 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 DDCP20711 480 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 RAB27AP51159 221 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 CTXN1P60606 82 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 RRP1BQ14684 758 aaKnown RBP4.11□□□□□ -1.75
ERCC8-206ENST00000484330 NRN1LQ496H8 165 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 USP39Q53GS9 565 aaKnown RBP4.11□□□□□ -1.75
ERCC8-206ENST00000484330 ATXN7L2Q5T6C5 722 aaPredicted RBP4.11□□□□□ -1.75
ERCC8-206ENST00000484330 AFMIDQ63HM1 303 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 SPATA31D4Q6ZUB0 917 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 GPRIN1Q7Z2K8 1008 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 XYLT1Q86Y38 959 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 TMPRSS6Q8IU80 811 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 C1orf210Q8IVY1 113 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 JDP2Q8WYK2 163 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 CEP95Q96GE4 821 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 TMX3Q96JJ7 454 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 MRI1Q9BV20 369 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 LSM14BQ9BX40 385 aaKnown RBP4.11□□□□□ -1.75
ERCC8-206ENST00000484330 KMT5AQ9NQR1 393 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 FAM30AQ9NZY2 134 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 LIMCH1Q9UPQ0 1083 aa4.11□□□□□ -1.75
ERCC8-206ENST00000484330 OFD1O75665 1012 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 ZRANB2O95218 330 aaKnown RBP eCLIP4.1□□□□□ -1.75
ERCC8-206ENST00000484330 PEX11BO96011 259 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 POU2F2P09086 479 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 MTHFD1P11586 935 aaKnown RBP4.1□□□□□ -1.75
ERCC8-206ENST00000484330 HSPA6P17066 643 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 PDCP20941 246 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 SLC6A9P48067 706 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 SCNN1GP51170 649 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 RABGGTBP53611 331 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 MXRA7P84157 204 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 ZXDAP98168 799 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 MTM1Q13496 603 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 GTF2H3Q13889 308 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 PPP2R5AQ15172 486 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 SPDYAQ5MJ70 313 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 RNF207Q6ZRF8 634 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 Q6ZRM9 215 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 SEM1Q6ZVN7 128 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 USP45Q70EL2 814 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 CHPFQ8IZ52 775 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 AOPEPQ8N6M6 819 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 OR10H5Q8NGA6 315 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 OR2I1PQ8NGU4 316 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 SH3RF3Q8TEJ3 882 aaPredicted RBP4.1□□□□□ -1.75
ERCC8-206ENST00000484330 STON2Q8WXE9 905 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 JPH3Q8WXH2 748 aaPredicted RBP4.1□□□□□ -1.75
ERCC8-206ENST00000484330 CLPTM1LQ96KA5 538 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 MAP3K14Q99558 947 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 NDC1Q9BTX1 674 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 KRTAP3-1Q9BYR8 98 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 CDH19Q9H159 772 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 LDAHQ9H6V9 325 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 ZNF703Q9H7S9 590 aaPredicted RBP4.1□□□□□ -1.75
ERCC8-206ENST00000484330 GNL3LQ9NVN8 582 aaKnown RBP4.1□□□□□ -1.75
ERCC8-206ENST00000484330 ZIM2Q9NZV7 527 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 EIF2B4Q9UI10 523 aaKnown RBP4.1□□□□□ -1.75
ERCC8-206ENST00000484330 SIK3Q9Y2K2 1263 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 PCDHA13Q9Y5I0 950 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 XDHP47989 1333 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 ATRNL1Q5VV63 1379 aa4.1□□□□□ -1.75
ERCC8-206ENST00000484330 KLRG2A4D1S0 409 aaPredicted RBP4.09□□□□□ -1.75
ERCC8-206ENST00000484330 AMY1AP04745 511 aa4.09□□□□□ -1.75
ERCC8-206ENST00000484330 EDNRBP24530 442 aa4.09□□□□□ -1.75
ERCC8-206ENST00000484330 SMARCA1P28370 1054 aa4.09□□□□□ -1.75
ERCC8-206ENST00000484330 ALDH1A3P47895 512 aa4.09□□□□□ -1.75
ERCC8-206ENST00000484330 RAP2BP61225 183 aa4.09□□□□□ -1.75
ERCC8-206ENST00000484330 IL10RAQ13651 578 aa4.09□□□□□ -1.75
ERCC8-206ENST00000484330 UBXN2BQ14CS0 331 aa4.09□□□□□ -1.75
ERCC8-206ENST00000484330 CDSNQ15517 529 aa4.09□□□□□ -1.75
ERCC8-206ENST00000484330 C3orf36Q3SXR2 165 aa4.09□□□□□ -1.75
ERCC8-206ENST00000484330 RABL3Q5HYI8 236 aa4.09□□□□□ -1.75
ERCC8-206ENST00000484330 IFIT1BQ5T764 474 aaKnown RBP4.09□□□□□ -1.75
ERCC8-206ENST00000484330 CXorf57Q6NSI4 855 aaKnown RBP4.09□□□□□ -1.75
ERCC8-206ENST00000484330 PLXDC1Q8IUK5 500 aa4.09□□□□□ -1.75
ERCC8-206ENST00000484330 C3orf20Q8ND61 904 aa4.09□□□□□ -1.75
ERCC8-206ENST00000484330 EXTL1Q92935 676 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms