RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-229ENST00000483159 PRG3Q9Y2Y8 225 aaPredicted RBP13.51□□□□□ -0.25
MRPL55-229ENST00000483159 PCDHGC5Q9Y5F6 944 aa13.51□□□□□ -0.25
MRPL55-229ENST00000483159 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.51□□□□□ -0.25
MRPL55-229ENST00000483159 STYXL1Q9Y6J8 313 aa13.51□□□□□ -0.25
MRPL55-229ENST00000483159 XIRP2A4UGR9 3374 aa13.51□□□□□ -0.25
MRPL55-229ENST00000483159 FAM237AA0A1B0GTK4 181 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 A0A1W2PQ27 194 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 A0A1W2PQ64 194 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 A0A1W2PQD8 194 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 HIDE1A8MVS5 230 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 PER2O15055 1255 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 TADA2AO75478 443 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 SOD2P04179 222 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 SRGAP2BP0DMP2 458 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 GTF2F1P35269 517 aaKnown RBP eCLIP13.5□□□□□ -0.25
MRPL55-229ENST00000483159 LTBRP36941 435 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 OSTNP61366 133 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 POU5F1Q01860 360 aaKnown RBP13.5□□□□□ -0.25
MRPL55-229ENST00000483159 HSP90AA2PQ14568 343 aaPredicted RBP13.5□□□□□ -0.25
MRPL55-229ENST00000483159 POSTNQ15063 836 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 STXBP4Q6ZWJ1 553 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 RNF168Q8IYW5 571 aaPredicted RBP13.5□□□□□ -0.25
MRPL55-229ENST00000483159 CEP57L1Q8IYX8 460 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 STAMQ92783 540 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 DDX27Q96GQ7 796 aaKnown RBP13.5□□□□□ -0.25
MRPL55-229ENST00000483159 SNX27Q96L92 541 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 ACCSQ96QU6 501 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 VN1R3Q9BXE9 311 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 HAPLN2Q9GZV7 340 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 CXCL16Q9H2A7 254 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 MRPL17Q9NRX2 175 aaKnown RBP13.5□□□□□ -0.25
MRPL55-229ENST00000483159 CNTN3Q9P232 1028 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 ADAM28Q9UKQ2 775 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 KIAA1671Q9BY89 1806 aa13.5□□□□□ -0.25
MRPL55-229ENST00000483159 PVALEFA0A1B0GWK0 134 aa13.49□□□□□ -0.25
MRPL55-229ENST00000483159 OGTO15294 1046 aa13.49□□□□□ -0.25
MRPL55-229ENST00000483159 FAM189A1O60320 539 aa13.49□□□□□ -0.25
MRPL55-229ENST00000483159 HARSP12081 509 aaKnown RBP13.49□□□□□ -0.25
MRPL55-229ENST00000483159 KCNC3Q14003 757 aa13.49□□□□□ -0.25
MRPL55-229ENST00000483159 SLC10A6Q3KNW5 377 aa13.49□□□□□ -0.25
MRPL55-229ENST00000483159 L1TD1Q5T7N2 865 aaKnown RBP13.49□□□□□ -0.25
MRPL55-229ENST00000483159 SLC39A4Q6P5W5 647 aa13.49□□□□□ -0.25
MRPL55-229ENST00000483159 DCLRE1AQ6PJP8 1040 aa13.49□□□□□ -0.25
MRPL55-229ENST00000483159 EP400NLQ6ZTU2 488 aa13.49□□□□□ -0.25
MRPL55-229ENST00000483159 TMEM87AQ8NBN3 555 aa13.49□□□□□ -0.25
MRPL55-229ENST00000483159 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.49□□□□□ -0.25
MRPL55-229ENST00000483159 CHAMP1Q96JM3 812 aa13.49□□□□□ -0.25
MRPL55-229ENST00000483159 MSTO1Q9BUK6 570 aa13.49□□□□□ -0.25
MRPL55-229ENST00000483159 HERC2P3Q9BVR0 1158 aa13.49□□□□□ -0.25
MRPL55-229ENST00000483159 EMILIN2Q9BXX0 1053 aa13.49□□□□□ -0.25
MRPL55-229ENST00000483159 TMEM206Q9H813 350 aa13.49□□□□□ -0.25
MRPL55-229ENST00000483159 CHST7Q9NS84 486 aa13.49□□□□□ -0.25
MRPL55-229ENST00000483159 FAM50BQ9Y247 325 aa13.49□□□□□ -0.25
MRPL55-229ENST00000483159 HPSEQ9Y251 543 aa13.49□□□□□ -0.25
MRPL55-229ENST00000483159 SF3B1O75533 1304 aaKnown RBP eCLIP13.48□□□□□ -0.252e-7■■■■■ 129.2
MRPL55-229ENST00000483159 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.48□□□□□ -0.25
MRPL55-229ENST00000483159 A0A1B0GVL5 298 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 TTC26A0AVF1 554 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 CASTOR2A6NHX0 329 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 TMEM189-UBE2V1I3L0A0 370 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 LINC01565O15544 149 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 LILRB3O75022 631 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 GCNT3O95395 438 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 C1RP00736 705 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 MYL1P05976 194 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 URODP06132 367 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 ADRB2P07550 413 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 PFKFB1P16118 471 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 RPL9P32969 192 aaKnown RBP13.48□□□□□ -0.25
MRPL55-229ENST00000483159 GLUD2P49448 558 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 NDUFV1P49821 464 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 KCNQ1P51787 676 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 ASIC1P78348 528 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 ELAVL2Q12926 359 aaKnown RBP13.48□□□□□ -0.25
MRPL55-229ENST00000483159 COASYQ13057 564 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 PTPN14Q15678 1187 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 UPP1Q16831 310 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 USP41Q3LFD5 358 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 KIAA0319Q5VV43 1072 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 KIAA1841Q6NSI8 718 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 FUT10Q6P4F1 479 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 PPFIBP1Q86W92 1011 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 CD302Q8IX05 232 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 MSLNLQ96KJ4 702 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 ZMAT2Q96NC0 199 aaKnown RBP13.48□□□□□ -0.25
MRPL55-229ENST00000483159 PAAF1Q9BRP4 392 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 TBC1D7Q9P0N9 293 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 CLEC1BQ9P126 229 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 CPSF3Q9UKF6 684 aaKnown RBP13.48□□□□□ -0.25
MRPL55-229ENST00000483159 CIZ1Q9ULV3 898 aaPredicted RBP13.48□□□□□ -0.25
MRPL55-229ENST00000483159 MYH15Q9Y2K3 1946 aa13.48□□□□□ -0.25
MRPL55-229ENST00000483159 GRXCR2A6NFK2 248 aa13.47□□□□□ -0.25
MRPL55-229ENST00000483159 ANKRD63C9JTQ0 380 aa13.47□□□□□ -0.25
MRPL55-229ENST00000483159 F8W810 466 aa13.47□□□□□ -0.25
MRPL55-229ENST00000483159 H3BQ06 376 aaPredicted RBP13.47□□□□□ -0.25
MRPL55-229ENST00000483159 MEFVO15553 781 aaPredicted RBP13.47□□□□□ -0.25
MRPL55-229ENST00000483159 TRAPPC3O43617 180 aa13.47□□□□□ -0.25
MRPL55-229ENST00000483159 ACTN4O43707 911 aaKnown RBP13.47□□□□□ -0.25
MRPL55-229ENST00000483159 CLASP2O75122 1294 aaKnown RBP13.47□□□□□ -0.25
MRPL55-229ENST00000483159 TBX10O75333 385 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms