RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 HLA-DOAP06340 250 aa4.98□□□□□ -1.61
GTF3A-207ENST00000482655 SNRPA1P09661 255 aaKnown RBP4.98□□□□□ -1.61
GTF3A-207ENST00000482655 NR4A1P22736 598 aa4.98□□□□□ -1.61
GTF3A-207ENST00000482655 MXRA7P84157 204 aa4.98□□□□□ -1.61
GTF3A-207ENST00000482655 SRSF2Q01130 221 aaKnown RBP4.98□□□□□ -1.61
GTF3A-207ENST00000482655 BMT2Q1RMZ1 405 aa4.98□□□□□ -1.61
GTF3A-207ENST00000482655 ANO4Q32M45 955 aa4.98□□□□□ -1.61
GTF3A-207ENST00000482655 FAM47AQ5JRC9 791 aa4.98□□□□□ -1.61
GTF3A-207ENST00000482655 MFSD14BQ5SR56 506 aa4.98□□□□□ -1.61
GTF3A-207ENST00000482655 RNF219Q5W0B1 726 aaPredicted RBP4.98□□□□□ -1.61
GTF3A-207ENST00000482655 AMOTL1Q8IY63 956 aa4.98□□□□□ -1.61
GTF3A-207ENST00000482655 OR7D4Q8NG98 312 aa4.98□□□□□ -1.61
GTF3A-207ENST00000482655 MYEOVQ96EZ4 313 aa4.98□□□□□ -1.61
GTF3A-207ENST00000482655 ORAI2Q96SN7 254 aa4.98□□□□□ -1.61
GTF3A-207ENST00000482655 AKIP1Q9NQ31 210 aa4.98□□□□□ -1.61
GTF3A-207ENST00000482655 MCM8Q9UJA3 840 aa4.98□□□□□ -1.61
GTF3A-207ENST00000482655 DMRT1Q9Y5R6 373 aa4.98□□□□□ -1.61
GTF3A-207ENST00000482655 TOP2AP11388 1531 aaKnown RBP4.97□□□□□ -1.61
GTF3A-207ENST00000482655 DNMBPQ6XZF7 1577 aa4.97□□□□□ -1.61
GTF3A-207ENST00000482655 POLA1P09884 1462 aaPredicted RBP4.97□□□□□ -1.61
GTF3A-207ENST00000482655 FOXN1O15353 648 aa4.97□□□□□ -1.61
GTF3A-207ENST00000482655 PJA2O43164 708 aa4.97□□□□□ -1.61
GTF3A-207ENST00000482655 B3GALT2O43825 422 aa4.97□□□□□ -1.61
GTF3A-207ENST00000482655 PRKD3O94806 890 aa4.97□□□□□ -1.61
GTF3A-207ENST00000482655 CLRN1P58418 232 aa4.97□□□□□ -1.61
GTF3A-207ENST00000482655 MALLQ13021 153 aa4.97□□□□□ -1.61
GTF3A-207ENST00000482655 RRP12Q5JTH9 1297 aaKnown RBP4.97□□□□□ -1.61
GTF3A-207ENST00000482655 ATXN7L2Q5T6C5 722 aaPredicted RBP4.97□□□□□ -1.61
GTF3A-207ENST00000482655 MBNL2Q5VZF2 373 aaKnown RBP4.97□□□□□ -1.61
GTF3A-207ENST00000482655 LHFPL2Q6ZUX7 228 aa4.97□□□□□ -1.61
GTF3A-207ENST00000482655 ZNF572Q7Z3I7 529 aaPredicted RBP4.97□□□□□ -1.61
GTF3A-207ENST00000482655 KCNK18Q7Z418 384 aa4.97□□□□□ -1.61
GTF3A-207ENST00000482655 TRMT2AQ8IZ69 625 aaKnown RBP4.97□□□□□ -1.61
GTF3A-207ENST00000482655 PQLC1Q8N2U9 271 aa4.97□□□□□ -1.61
GTF3A-207ENST00000482655 REPS2Q8NFH8 660 aa4.97□□□□□ -1.61
GTF3A-207ENST00000482655 COG1Q8WTW3 980 aa4.97□□□□□ -1.61
GTF3A-207ENST00000482655 PHACTR3Q96KR7 559 aa4.97□□□□□ -1.61
GTF3A-207ENST00000482655 SENP6Q9GZR1 1112 aaPredicted RBP4.97□□□□□ -1.61
GTF3A-207ENST00000482655 REXO4Q9GZR2 422 aaKnown RBP4.97□□□□□ -1.61
GTF3A-207ENST00000482655 CYP4F11Q9HBI6 524 aa4.97□□□□□ -1.61
GTF3A-207ENST00000482655 CCM2LQ9NUG4 571 aaPredicted RBP4.97□□□□□ -1.61
GTF3A-207ENST00000482655 MOCS1Q9NZB8 636 aa4.97□□□□□ -1.61
GTF3A-207ENST00000482655 CHST2Q9Y4C5 530 aa4.97□□□□□ -1.61
GTF3A-207ENST00000482655 CCDC88BA6NC98 1476 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 GAPVD1Q14C86 1478 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 SNAPC4Q5SXM2 1469 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 TDRD9Q8NDG6 1382 aaKnown RBP4.96□□□□□ -1.62
GTF3A-207ENST00000482655 CXorf49A8MYA2 514 aaPredicted RBP4.96□□□□□ -1.62
GTF3A-207ENST00000482655 OVOL3O00110 214 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 ENDOD1O94919 500 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 RHOBTB3O94955 611 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 NDUFA10O95299 355 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 RAP2AP10114 183 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 OSMP13725 252 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 IL2RBP14784 551 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 ZSCAN20P17040 1043 aaPredicted RBP4.96□□□□□ -1.62
GTF3A-207ENST00000482655 KRT4P19013 534 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 RAP2BP61225 183 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 FAM189BP81408 668 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 SP140Q13342 867 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 NOMO1Q15155 1222 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 SYT12Q8IV01 421 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 FBXO18Q8NFZ0 1043 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 SLC35B2Q8TB61 432 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 METTL14Q9HCE5 456 aaKnown RBP4.96□□□□□ -1.62
GTF3A-207ENST00000482655 DMRT3Q9NQL9 472 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 LANCL2Q9NS86 450 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 USP15Q9Y4E8 981 aaPredicted RBP4.96□□□□□ -1.62
GTF3A-207ENST00000482655 HS3ST4Q9Y661 456 aa4.96□□□□□ -1.62
GTF3A-207ENST00000482655 CENPVL1A0A0U1RR11 272 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 GCP02774 474 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 ALOX15P16050 662 aaPredicted RBP4.95□□□□□ -1.62
GTF3A-207ENST00000482655 ATP5JP18859 108 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 SREBF1P36956 1147 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 GPR3P46089 330 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 CHN2P52757 468 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 PTTG1IPP53801 180 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 USP14P54578 494 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 AMPD3Q01432 767 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 CSRP2Q16527 193 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 PDCD4Q53EL6 469 aaKnown RBP4.95□□□□□ -1.62
GTF3A-207ENST00000482655 Q6ZPA2 131 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 Q6ZVL8 140 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 VRK3Q8IV63 474 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 DRC7Q8IY82 874 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 ZG16BQ96DA0 208 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 AGAP2Q99490 1192 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 TMEM140Q9NV12 185 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 SCOCQ9UIL1 159 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 DNM3Q9UQ16 869 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 ATP11BQ9Y2G3 1177 aa4.95□□□□□ -1.62
GTF3A-207ENST00000482655 TMEM200CA6NKL6 621 aa4.94□□□□□ -1.62
GTF3A-207ENST00000482655 FAM171A2A8MVW0 826 aa4.94□□□□□ -1.62
GTF3A-207ENST00000482655 ZNF185O15231 689 aa4.94□□□□□ -1.62
GTF3A-207ENST00000482655 TEX33O43247 280 aa4.94□□□□□ -1.62
GTF3A-207ENST00000482655 LPXNO60711 386 aa4.94□□□□□ -1.62
GTF3A-207ENST00000482655 PPFIA2O75334 1257 aa4.94□□□□□ -1.62
GTF3A-207ENST00000482655 GSPT1P15170 499 aaKnown RBP4.94□□□□□ -1.62
GTF3A-207ENST00000482655 DDX6P26196 483 aaKnown RBP eCLIP4.94□□□□□ -1.62
GTF3A-207ENST00000482655 ZFP36P26651 326 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms