RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 TTPALQ9BTX7 342 aa20.4■□□□□ 0.86
CLK1-211ENST00000481641 TARS2Q9BW92 718 aaKnown RBP20.4■□□□□ 0.86
CLK1-211ENST00000481641 CDT1Q9H211 546 aa20.4■□□□□ 0.86
CLK1-211ENST00000481641 GOLGA2P5Q9HBQ8 144 aa20.4■□□□□ 0.86
CLK1-211ENST00000481641 KMT5AQ9NQR1 393 aa20.4■□□□□ 0.86
CLK1-211ENST00000481641 DOCK6Q96HP0 2047 aa20.39■□□□□ 0.86
CLK1-211ENST00000481641 VWA8A3KMH1 1905 aa20.39■□□□□ 0.86
CLK1-211ENST00000481641 PHLPP2Q6ZVD8 1323 aa20.39■□□□□ 0.85
CLK1-211ENST00000481641 SLC16A4O15374 487 aa20.39■□□□□ 0.85
CLK1-211ENST00000481641 ADAM12O43184 909 aa20.39■□□□□ 0.85
CLK1-211ENST00000481641 DMP1Q13316 513 aaPredicted RBP20.39■□□□□ 0.85
CLK1-211ENST00000481641 GPR65Q8IYL9 337 aa20.39■□□□□ 0.85
CLK1-211ENST00000481641 LNX1Q8TBB1 728 aaPredicted RBP20.39■□□□□ 0.85
CLK1-211ENST00000481641 PPP1R10Q96QC0 940 aaKnown RBP20.39■□□□□ 0.85
CLK1-211ENST00000481641 CLSTN3Q9BQT9 956 aa20.39■□□□□ 0.85
CLK1-211ENST00000481641 NT5C3AQ9H0P0 336 aa20.39■□□□□ 0.85
CLK1-211ENST00000481641 TMEM134Q9H6X4 195 aa20.39■□□□□ 0.85
CLK1-211ENST00000481641 PTPRHQ9HD43 1115 aa20.39■□□□□ 0.85
CLK1-211ENST00000481641 WDR6Q9NNW5 1121 aaKnown RBP20.39■□□□□ 0.85
CLK1-211ENST00000481641 ARHGAP28Q9P2N2 729 aa20.39■□□□□ 0.85
CLK1-211ENST00000481641 DPP7Q9UHL4 492 aa20.39■□□□□ 0.85
CLK1-211ENST00000481641 SMC3Q9UQE7 1217 aa20.39■□□□□ 0.85
CLK1-211ENST00000481641 CLUHO75153 1309 aa20.38■□□□□ 0.85
CLK1-211ENST00000481641 GBP2P32456 591 aaPredicted RBP20.38■□□□□ 0.85
CLK1-211ENST00000481641 CLCNKBP51801 687 aa20.38■□□□□ 0.85
CLK1-211ENST00000481641 TCF15Q12870 199 aa20.38■□□□□ 0.85
CLK1-211ENST00000481641 PSMD5Q16401 504 aa20.38■□□□□ 0.85
CLK1-211ENST00000481641 ZNF568Q3ZCX4 644 aa20.38■□□□□ 0.85
CLK1-211ENST00000481641 ELMSAN1Q6PJG2 1045 aa20.38■□□□□ 0.85
CLK1-211ENST00000481641 CD300LGQ6UXG3 332 aa20.38■□□□□ 0.85
CLK1-211ENST00000481641 HDAC7Q8WUI4 952 aa20.38■□□□□ 0.85
CLK1-211ENST00000481641 PIK3R5Q8WYR1 880 aa20.38■□□□□ 0.85
CLK1-211ENST00000481641 ZBTB45Q96K62 511 aaPredicted RBP20.38■□□□□ 0.85
CLK1-211ENST00000481641 DRC1Q96MC2 740 aa20.38■□□□□ 0.85
CLK1-211ENST00000481641 MYADMQ96S97 322 aa20.38■□□□□ 0.85
CLK1-211ENST00000481641 MRPL4Q9BYD3 311 aaKnown RBP20.38■□□□□ 0.85
CLK1-211ENST00000481641 PLEKHA4Q9H4M7 779 aa20.38■□□□□ 0.85
CLK1-211ENST00000481641 UPF2Q9HAU5 1272 aaKnown RBP20.38■□□□□ 0.85
CLK1-211ENST00000481641 KCNK12Q9HB15 430 aa20.38■□□□□ 0.85
CLK1-211ENST00000481641 PIDD1Q9HB75 910 aa20.38■□□□□ 0.85
CLK1-211ENST00000481641 NPHP3-ACAD11A0A0J9YXS1 232 aa20.37■□□□□ 0.85
CLK1-211ENST00000481641 HARSP12081 509 aaKnown RBP20.37■□□□□ 0.85
CLK1-211ENST00000481641 GRM5P41594 1212 aa20.37■□□□□ 0.85
CLK1-211ENST00000481641 CACNB1Q02641 598 aaPredicted RBP20.37■□□□□ 0.85
CLK1-211ENST00000481641 CREMQ03060 361 aa20.37■□□□□ 0.85
CLK1-211ENST00000481641 SOX4Q06945 474 aaPredicted RBP20.37■□□□□ 0.85
CLK1-211ENST00000481641 HYIQ5T013 277 aa20.37■□□□□ 0.85
CLK1-211ENST00000481641 RSAD2Q8WXG1 361 aa20.37■□□□□ 0.85
CLK1-211ENST00000481641 TBC1D32Q96NH3 1257 aa20.37■□□□□ 0.85
CLK1-211ENST00000481641 PRKD2Q9BZL6 878 aa20.37■□□□□ 0.85
CLK1-211ENST00000481641 MYH11P35749 1972 aa20.37■□□□□ 0.85
CLK1-211ENST00000481641 DOCK8Q8NF50 2099 aa20.36■□□□□ 0.85
CLK1-211ENST00000481641 SMIM28A0A1B0GU29 152 aa20.36■□□□□ 0.85
CLK1-211ENST00000481641 I3L4J1 428 aa20.36■□□□□ 0.85
CLK1-211ENST00000481641 B3GAT3O94766 335 aa20.36■□□□□ 0.85
CLK1-211ENST00000481641 GUCY2CP25092 1073 aa20.36■□□□□ 0.85
CLK1-211ENST00000481641 MRE11P49959 708 aa20.36■□□□□ 0.85
CLK1-211ENST00000481641 LARP1BQ659C4 914 aaKnown RBP20.36■□□□□ 0.85
CLK1-211ENST00000481641 APBB1IPQ7Z5R6 666 aaPredicted RBP20.36■□□□□ 0.85
CLK1-211ENST00000481641 SYT2Q8N9I0 419 aaPredicted RBP20.36■□□□□ 0.85
CLK1-211ENST00000481641 C3orf58Q8NDZ4 430 aa20.36■□□□□ 0.85
CLK1-211ENST00000481641 ST13P5Q8NFI4 369 aaPredicted RBP20.36■□□□□ 0.85
CLK1-211ENST00000481641 ZMAT2Q96NC0 199 aaKnown RBP20.36■□□□□ 0.85
CLK1-211ENST00000481641 TCHPQ9BT92 498 aa20.36■□□□□ 0.85
CLK1-211ENST00000481641 CCDC94Q9BW85 323 aaPredicted RBP20.36■□□□□ 0.85
CLK1-211ENST00000481641 RHOBTB2Q9BYZ6 727 aa20.36■□□□□ 0.85
CLK1-211ENST00000481641 ZDHHC7Q9NXF8 308 aa20.36■□□□□ 0.85
CLK1-211ENST00000481641 FBXW11Q9UKB1 542 aa20.36■□□□□ 0.85
CLK1-211ENST00000481641 ABLIM1O14639 778 aa20.35■□□□□ 0.85
CLK1-211ENST00000481641 MEFVO15553 781 aaPredicted RBP20.35■□□□□ 0.85
CLK1-211ENST00000481641 NARSO43776 548 aaKnown RBP20.35■□□□□ 0.85
CLK1-211ENST00000481641 ZMYND10O75800 440 aa20.35■□□□□ 0.85
CLK1-211ENST00000481641 PAPLNO95428 1278 aa20.35■□□□□ 0.85
CLK1-211ENST00000481641 C1RP00736 705 aa20.35■□□□□ 0.85
CLK1-211ENST00000481641 PLA2G4BP0C869 781 aa20.35■□□□□ 0.85
CLK1-211ENST00000481641 PROZP22891 400 aa20.35■□□□□ 0.85
CLK1-211ENST00000481641 BRCC3P46736 316 aa20.35■□□□□ 0.85
CLK1-211ENST00000481641 YARSP54577 528 aaKnown RBP20.35■□□□□ 0.85
CLK1-211ENST00000481641 PTPN5P54829 565 aa20.35■□□□□ 0.85
CLK1-211ENST00000481641 SLC12A3P55017 1021 aa20.35■□□□□ 0.85
CLK1-211ENST00000481641 ELAVL2Q12926 359 aaKnown RBP20.35■□□□□ 0.85
CLK1-211ENST00000481641 TDGQ13569 410 aa20.35■□□□□ 0.85
CLK1-211ENST00000481641 UPP1Q16831 310 aa20.35■□□□□ 0.85
CLK1-211ENST00000481641 SEZ6Q53EL9 994 aa20.35■□□□□ 0.85
CLK1-211ENST00000481641 DCLRE1AQ6PJP8 1040 aa20.35■□□□□ 0.85
CLK1-211ENST00000481641 ALKAL1Q6UXT8 129 aa20.35■□□□□ 0.85
CLK1-211ENST00000481641 RSPO2Q6UXX9 243 aaPredicted RBP20.35■□□□□ 0.85
CLK1-211ENST00000481641 CYP26C1Q6V0L0 522 aa20.35■□□□□ 0.85
CLK1-211ENST00000481641 LRRC15Q8TF66 581 aa20.35■□□□□ 0.85
CLK1-211ENST00000481641 CDK5RAP3Q96JB5 506 aa20.35■□□□□ 0.85
CLK1-211ENST00000481641 RBM19Q9Y4C8 960 aaKnown RBP20.35■□□□□ 0.85
CLK1-211ENST00000481641 PLS3P13797 630 aa20.34■□□□□ 0.85
CLK1-211ENST00000481641 FGFR3P22607 806 aa20.34■□□□□ 0.85
CLK1-211ENST00000481641 TKTP29401 623 aaKnown RBP20.34■□□□□ 0.85
CLK1-211ENST00000481641 MCM2P49736 904 aa20.34■□□□□ 0.85
CLK1-211ENST00000481641 TMEM119Q4V9L6 283 aa20.34■□□□□ 0.85
CLK1-211ENST00000481641 XKR4Q5GH76 650 aa20.34■□□□□ 0.85
CLK1-211ENST00000481641 ARL6IP4Q66PJ3 421 aaKnown RBP20.34■□□□□ 0.85
CLK1-211ENST00000481641 MPZL3Q6UWV2 235 aa20.34■□□□□ 0.85
CLK1-211ENST00000481641 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms