RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 CCDC15Q0P6D6 951 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 CCDC144BQ3MJ40 725 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 FAM102AQ5T9C2 384 aaPredicted RBP12.2□□□□□ -0.46
TRIM27-205ENST00000481474 OLFML2BQ68BL8 750 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 NUP85Q9BW27 656 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.2□□□□□ -0.46
TRIM27-205ENST00000481474 POLRMTO00411 1230 aaKnown RBP12.2□□□□□ -0.46
TRIM27-205ENST00000481474 CKBP12277 381 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 ITGB6P18564 788 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 EIF4BP23588 611 aaKnown RBP12.2□□□□□ -0.46
TRIM27-205ENST00000481474 PSEN2P49810 448 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 SFSWAPQ12872 951 aaKnown RBP12.2□□□□□ -0.46
TRIM27-205ENST00000481474 ENAHQ8N8S7 591 aaPredicted RBP12.2□□□□□ -0.46
TRIM27-205ENST00000481474 FAM162AQ96A26 154 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 PRKD2Q9BZL6 878 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 MRPL47Q9HD33 250 aaKnown RBP12.2□□□□□ -0.46
TRIM27-205ENST00000481474 PI4KBQ9UBF8 816 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 PADI4Q9UM07 663 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 FHOD1Q9Y613 1164 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 CFTRP13569 1480 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 SCAMP3O14828 347 aaKnown RBP12.2□□□□□ -0.46
TRIM27-205ENST00000481474 KLC1Q07866 573 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 EFHC2Q5JST6 749 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 SLFN12LQ6IEE8 588 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 EPB41L5Q9HCM4 733 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 CYLDQ9NQC7 956 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 ABCB1P08183 1280 aaPredicted RBP12.2□□□□□ -0.46
TRIM27-205ENST00000481474 PHKA1P46020 1223 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 BEND6Q5SZJ8 279 aaPredicted RBP12.2□□□□□ -0.46
TRIM27-205ENST00000481474 PRR23BQ6ZRT6 265 aa12.2□□□□□ -0.46
TRIM27-205ENST00000481474 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.2□□□□□ -0.46
TRIM27-205ENST00000481474 NKTRP30414 1462 aaKnown RBP12.19□□□□□ -0.46
TRIM27-205ENST00000481474 ASS1P00966 412 aaKnown RBP12.19□□□□□ -0.46
TRIM27-205ENST00000481474 PSMA3P25788 255 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 HORMAD1Q86X24 394 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 CCDC60Q8IWA6 550 aaPredicted RBP12.19□□□□□ -0.46
TRIM27-205ENST00000481474 TTC13Q8NBP0 860 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 FBXO41Q8TF61 875 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 TRIM62Q9BVG3 475 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 USP44Q9H0E7 712 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 ANAPC7Q9UJX3 599 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 DSG3P32926 999 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 HARS2P49590 506 aaKnown RBP12.19□□□□□ -0.46
TRIM27-205ENST00000481474 NEK2P51955 445 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 TPI1P60174 286 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 C15orf59Q2T9L4 293 aaPredicted RBP12.19□□□□□ -0.46
TRIM27-205ENST00000481474 ZBED8Q8IZ13 594 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 KIFC3Q9BVG8 833 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 PIF1Q9H611 641 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 HACL1Q9UJ83 578 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 RPH3AQ9Y2J0 694 aaPredicted RBP12.19□□□□□ -0.46
TRIM27-205ENST00000481474 TOMM70O94826 608 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 POU1F1P28069 291 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 HEATR6Q6AI08 1181 aaKnown RBP12.19□□□□□ -0.46
TRIM27-205ENST00000481474 TMA16Q96EY4 203 aaKnown RBP12.19□□□□□ -0.46
TRIM27-205ENST00000481474 KIF21BO75037 1637 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 DCDC2CA8MYV0 355 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 TRAPPC3O43617 180 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 PFKFB2O60825 505 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 PGK2P07205 417 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 MXI1P50539 228 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 NCKAP1LP55160 1127 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 CAMK2GQ13555 558 aaPredicted RBP12.19□□□□□ -0.46
TRIM27-205ENST00000481474 LLPHQ9BRT6 129 aaKnown RBP12.19□□□□□ -0.46
TRIM27-205ENST00000481474 SHCBP1LQ9BZQ2 653 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 DNAJC12Q9UKB3 198 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 TRIM17Q9Y577 477 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 POTEFA5A3E0 1075 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 COPEO14579 308 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 CYTH1Q15438 398 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 ZNF746Q6NUN9 644 aaPredicted RBP12.19□□□□□ -0.46
TRIM27-205ENST00000481474 CHST12Q9NRB3 414 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 SPACA6W5XKT8 324 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 MSH4O15457 936 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 ACTN3Q08043 901 aaPredicted RBP12.19□□□□□ -0.46
TRIM27-205ENST00000481474 HIC1Q14526 733 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 NFIL3Q16649 462 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 EML3Q32P44 896 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 MMGT1Q8N4V1 131 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 OTUD7AQ8TE49 926 aaPredicted RBP12.19□□□□□ -0.46
TRIM27-205ENST00000481474 CYGBQ8WWM9 190 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 CNGB3Q9NQW8 809 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 AAASQ9NRG9 546 aa12.19□□□□□ -0.46
TRIM27-205ENST00000481474 PDZK1P1A8MUH7 402 aa12.18□□□□□ -0.46
TRIM27-205ENST00000481474 SGCGQ13326 291 aa12.18□□□□□ -0.46
TRIM27-205ENST00000481474 PGS1Q32NB8 556 aa12.18□□□□□ -0.46
TRIM27-205ENST00000481474 IDI2Q9BXS1 227 aa12.18□□□□□ -0.46
TRIM27-205ENST00000481474 PSD3Q9NYI0 1048 aa12.18□□□□□ -0.46
TRIM27-205ENST00000481474 TRIM64BA6NI03 449 aa12.18□□□□□ -0.46
TRIM27-205ENST00000481474 SCRN3Q0VDG4 424 aa12.18□□□□□ -0.46
TRIM27-205ENST00000481474 CCNIQ14094 377 aa12.18□□□□□ -0.46
TRIM27-205ENST00000481474 BRSK2Q8IWQ3 736 aa12.18□□□□□ -0.46
TRIM27-205ENST00000481474 CLEC4FQ8N1N0 589 aa12.18□□□□□ -0.46
TRIM27-205ENST00000481474 RBM41Q96IZ5 413 aaKnown RBP12.18□□□□□ -0.46
TRIM27-205ENST00000481474 CBX8Q9HC52 389 aa12.18□□□□□ -0.46
TRIM27-205ENST00000481474 PTPRHQ9HD43 1115 aa12.18□□□□□ -0.46
TRIM27-205ENST00000481474 CCL15-CCL14A0A0B4J2E2 113 aa12.18□□□□□ -0.46
TRIM27-205ENST00000481474 SUN1O94901 812 aa12.18□□□□□ -0.46
TRIM27-205ENST00000481474 SMARCA1P28370 1054 aa12.18□□□□□ -0.46
TRIM27-205ENST00000481474 GCLMP48507 274 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms