RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 UBE2Q1Q7Z7E8 422 aa11.01□□□□□ -0.65
USP39-215ENST00000481409 MRPL10Q7Z7H8 261 aaKnown RBP11.01□□□□□ -0.65
USP39-215ENST00000481409 PPFIBP1Q86W92 1011 aa11.01□□□□□ -0.65
USP39-215ENST00000481409 CNGA4Q8IV77 575 aa11.01□□□□□ -0.65
USP39-215ENST00000481409 THNSL1Q8IYQ7 743 aa11.01□□□□□ -0.65
USP39-215ENST00000481409 CCDC150Q8NCX0 1101 aa11.01□□□□□ -0.65
USP39-215ENST00000481409 ZNF397Q8NF99 534 aaPredicted RBP11.01□□□□□ -0.65
USP39-215ENST00000481409 ANKRD36BP1Q96IX9 119 aa11.01□□□□□ -0.65
USP39-215ENST00000481409 PAWRQ96IZ0 340 aaKnown RBP11.01□□□□□ -0.65
USP39-215ENST00000481409 IFIH1Q9BYX4 1025 aaKnown RBP11.01□□□□□ -0.65
USP39-215ENST00000481409 HIPK3Q9H422 1215 aa11.01□□□□□ -0.65
USP39-215ENST00000481409 FAM124BQ9H5Z6 455 aaPredicted RBP11.01□□□□□ -0.65
USP39-215ENST00000481409 MYO6Q9UM54 1294 aa11.01□□□□□ -0.65
USP39-215ENST00000481409 SIK3Q9Y2K2 1263 aa11.01□□□□□ -0.65
USP39-215ENST00000481409 GIT1Q9Y2X7 761 aa11.01□□□□□ -0.65
USP39-215ENST00000481409 TANC1Q9C0D5 1861 aa11.01□□□□□ -0.65
USP39-215ENST00000481409 TTC26A0AVF1 554 aa11□□□□□ -0.65
USP39-215ENST00000481409 LRRIQ3A6PVS8 624 aaPredicted RBP11□□□□□ -0.65
USP39-215ENST00000481409 TEX33O43247 280 aa11□□□□□ -0.65
USP39-215ENST00000481409 NPTXRO95502 500 aa11□□□□□ -0.65
USP39-215ENST00000481409 TNNC2P02585 160 aa11□□□□□ -0.65
USP39-215ENST00000481409 CXCL10P02778 98 aa11□□□□□ -0.65
USP39-215ENST00000481409 GHRP10912 638 aa11□□□□□ -0.65
USP39-215ENST00000481409 TNNI1P19237 187 aa11□□□□□ -0.65
USP39-215ENST00000481409 TRIM21P19474 475 aaKnown RBP11□□□□□ -0.65
USP39-215ENST00000481409 FGFR4P22455 802 aa11□□□□□ -0.65
USP39-215ENST00000481409 PAX3P23760 479 aa11□□□□□ -0.65
USP39-215ENST00000481409 TBX2Q13207 712 aaPredicted RBP11□□□□□ -0.65
USP39-215ENST00000481409 SYCP1Q15431 976 aa11□□□□□ -0.65
USP39-215ENST00000481409 ENOX2Q16206 610 aaKnown RBP11□□□□□ -0.65
USP39-215ENST00000481409 ZACNQ401N2 412 aa11□□□□□ -0.65
USP39-215ENST00000481409 TRIM60Q495X7 471 aa11□□□□□ -0.65
USP39-215ENST00000481409 PLEKHG4Q58EX7 1191 aa11□□□□□ -0.65
USP39-215ENST00000481409 XKR4Q5GH76 650 aa11□□□□□ -0.65
USP39-215ENST00000481409 UBXN11Q5T124 520 aa11□□□□□ -0.65
USP39-215ENST00000481409 C15orf39Q6ZRI6 1047 aa11□□□□□ -0.65
USP39-215ENST00000481409 TMC6Q7Z403 805 aa11□□□□□ -0.65
USP39-215ENST00000481409 FBXL13Q8NEE6 735 aa11□□□□□ -0.65
USP39-215ENST00000481409 NEK11Q8NG66 645 aa11□□□□□ -0.65
USP39-215ENST00000481409 SEPT8Q92599 483 aa11□□□□□ -0.65
USP39-215ENST00000481409 TAF4BQ92750 862 aa11□□□□□ -0.65
USP39-215ENST00000481409 JAKMIP2Q96AA8 810 aa11□□□□□ -0.65
USP39-215ENST00000481409 CCDC127Q96BQ5 260 aa11□□□□□ -0.65
USP39-215ENST00000481409 ELAC1Q9H777 363 aaKnown RBP11□□□□□ -0.65
USP39-215ENST00000481409 AGO3Q9H9G7 860 aaKnown RBP11□□□□□ -0.65
USP39-215ENST00000481409 RGS18Q9NS28 235 aa11□□□□□ -0.65
USP39-215ENST00000481409 FAM105AQ9NUU6 356 aa11□□□□□ -0.65
USP39-215ENST00000481409 CNTN3Q9P232 1028 aa11□□□□□ -0.65
USP39-215ENST00000481409 TBX21Q9UL17 535 aa11□□□□□ -0.65
USP39-215ENST00000481409 CITO14578 2027 aa11□□□□□ -0.65
USP39-215ENST00000481409 KIAA0355O15063 1070 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 EFCAB14O75071 495 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 C4BPAP04003 597 aaKnown RBP10.99□□□□□ -0.65
USP39-215ENST00000481409 TMEM191BP0C7N4 346 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 DLATP10515 647 aaKnown RBP10.99□□□□□ -0.65
USP39-215ENST00000481409 HARSP12081 509 aaKnown RBP10.99□□□□□ -0.65
USP39-215ENST00000481409 KCNE1P15382 129 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 CYP3A5P20815 502 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 CD52P31358 61 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 ATN1P54259 1190 aaPredicted RBP10.99□□□□□ -0.65
USP39-215ENST00000481409 PPP3CAQ08209 521 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 ARID5BQ14865 1188 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 TSR1Q2NL82 804 aaKnown RBP10.99□□□□□ -0.65
USP39-215ENST00000481409 SLC10A6Q3KNW5 377 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 EPC2Q52LR7 807 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 C1orf220Q5T0J3 134 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 ALKAL1Q6UXT8 129 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 SLC24A5Q71RS6 500 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 SV2AQ7L0J3 742 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 ENOSF1Q7L5Y1 443 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 EHBP1Q8NDI1 1231 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 DIS3LQ8TF46 1054 aaKnown RBP10.99□□□□□ -0.65
USP39-215ENST00000481409 SNX27Q96L92 541 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 PCMTD1Q96MG8 357 aaPredicted RBP10.99□□□□□ -0.65
USP39-215ENST00000481409 IMPG2Q9BZV3 1241 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 TMEM117Q9H0C3 514 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 TSPYL2Q9H2G4 693 aaPredicted RBP10.99□□□□□ -0.65
USP39-215ENST00000481409 PDE11AQ9HCR9 933 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 TMEM39AQ9NV64 488 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 SLC38A7Q9NVC3 462 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 RAB20Q9NX57 234 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 GCNT4Q9P109 453 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 CEP72Q9P209 647 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 ITGA11Q9UKX5 1188 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 CAPN11Q9UMQ6 739 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 IPPQ9Y573 584 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 PCDHB2Q9Y5E7 798 aa10.99□□□□□ -0.65
USP39-215ENST00000481409 AKR1B15C9JRZ8 316 aaPredicted RBP10.98□□□□□ -0.65
USP39-215ENST00000481409 INPPL1O15357 1258 aa10.98□□□□□ -0.65
USP39-215ENST00000481409 HOXA2O43364 376 aa10.98□□□□□ -0.65
USP39-215ENST00000481409 STAU1O95793 577 aaKnown RBP10.98□□□□□ -0.65
USP39-215ENST00000481409 TIMP1P01033 207 aa10.98□□□□□ -0.65
USP39-215ENST00000481409 PTMAP06454 111 aaKnown RBP10.98□□□□□ -0.65
USP39-215ENST00000481409 CCDC172P0C7W6 258 aa10.98□□□□□ -0.65
USP39-215ENST00000481409 TRIM49P0CI25 452 aa10.98□□□□□ -0.65
USP39-215ENST00000481409 TRIM49CP0CI26 452 aa10.98□□□□□ -0.65
USP39-215ENST00000481409 CXCL8P10145 99 aa10.98□□□□□ -0.65
USP39-215ENST00000481409 ITGA4P13612 1032 aa10.98□□□□□ -0.65
USP39-215ENST00000481409 PON1P27169 355 aa10.98□□□□□ -0.65
USP39-215ENST00000481409 ATICP31939 592 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms