RNA–Protein interactions for RNA: ENST00000481038.5

GPCPD1-205, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 6,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-205ENST00000481038 VPS16Q9H269 839 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 SAV1Q9H4B6 383 aaPredicted RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 EPB41L5Q9HCM4 733 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 IARS2Q9NSE4 1012 aaKnown RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 C20orf96Q9NUD7 363 aaPredicted RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 MLXQ9UH92 298 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 MAFFQ9ULX9 164 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 ORC6Q9Y5N6 252 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 MEGF6O75095 1541 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 BTN3A3O00478 584 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 THAP12O43422 761 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 PPP1R2P41236 205 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 CSNK2BP67870 215 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 C11orf91Q3C1V1 193 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 AKAP14Q86UN6 197 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 ANKRD13BQ86YJ7 626 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 PLD3Q8IV08 490 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 REXO1Q8N1G1 1221 aaKnown RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 STX19Q8N4C7 294 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 PSPC1Q8WXF1 523 aaKnown RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 KIFC2Q96AC6 838 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 NARS2Q96I59 477 aaKnown RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 ZFRQ96KR1 1074 aaKnown RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 EPC1Q9H2F5 836 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 TIMMDC1Q9NPL8 285 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 COMMD8Q9NX08 183 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 TRIM10Q9UDY6 481 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 GJA3Q9Y6H8 435 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 MYOM1P52179 1685 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 BIRC5O15392 142 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 RGS5O15539 181 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 SULT1B1O43704 296 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 RPS6KA5O75582 802 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 PDE9AO76083 593 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 KRT19P08727 400 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 TRIM23P36406 574 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 SPIRE1Q08AE8 756 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 NSUN2Q08J23 767 aaKnown RBP eCLIP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 GRIK3Q13003 919 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 RABL6Q3YEC7 729 aaPredicted RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 ZC2HC1CQ53FD0 456 aaPredicted RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 PPP1R15BQ5SWA1 713 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 APOBEC3FQ8IUX4 373 aaKnown RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 PM20D2Q8IYS1 436 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 HIPK4Q8NE63 616 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 PSMA8Q8TAA3 256 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 GRPEL2Q8TAA5 225 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 SIPA1Q96FS4 1042 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 TUBGCP5Q96RT8 1024 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 PITPNM3Q9BZ71 974 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 HAUS4Q9H6D7 363 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 QPCTLQ9NXS2 382 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 FAM8A1Q9UBU6 413 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 UTYO14607 1347 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 TOPAZ1Q8N9V7 1692 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 NFAT5O94916 1531 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 GTPBP10A4D1E9 387 aaKnown RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 CCRL2O00421 344 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 CLASP2O75122 1294 aaKnown RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 HEXIM1O94992 359 aaKnown RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 ALOX5P09917 674 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 FAM228BP0C875 321 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 GHRP10912 638 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 H2AFXP16104 143 aaPredicted RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 CCR3P51677 355 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 UGP2Q16851 508 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 SUSD4Q5VX71 490 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 PPP1R2P3Q6NXS1 205 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 ARID3BQ8IVW6 561 aaPredicted RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 GOLM1Q8NBJ4 401 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 NUP58Q9BVL2 599 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 SLC7A5P2Q9GIP4 190 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 PREBQ9HCU5 417 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 MKS1Q9NXB0 559 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 KCTD5Q9NXV2 234 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 LMCD1Q9NZU5 365 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 TBC1D7Q9P0N9 293 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 SERPINB13Q9UIV8 391 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 TRMT6Q9UJA5 497 aaKnown RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 BAIAP2Q9UQB8 552 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 SNX13Q9Y5W8 968 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 CAMTA2O94983 1202 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 FDX1P10109 184 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 GARSP41250 739 aaKnown RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 SLC1A1P43005 524 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 PGDP52209 483 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 COPS2P61201 443 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 RIPPLY1Q0D2K3 151 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 TRAP1Q12931 704 aaKnown RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 COTL1Q14019 142 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 EAPPQ56P03 285 aaPredicted RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 CRELD2Q6UXH1 353 aaPredicted RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 LPCAT2Q7L5N7 544 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 C16orf62Q7Z3J2 963 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 FOXP4Q8IVH2 680 aaPredicted RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 GLYCTKQ8IVS8 523 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 CCDC28AQ8IWP9 274 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 TRMT44Q8IYL2 757 aaKnown RBP4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 AHI1Q8N157 1196 aa4.79□□□□□ -1.64
GPCPD1-205ENST00000481038 KIF2BQ8N4N8 673 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms