RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.89□□□□□ -0.51
VTI1A-204ENST00000480057 LACRTQ9GZZ8 138 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 SPC25Q9HBM1 224 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 PDE11AQ9HCR9 933 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 C1orf112Q9NSG2 853 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 ADAMTS1Q9UHI8 967 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 NAGPAQ9UK23 515 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 MRFAP1Q9Y605 127 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 KAT6AQ92794 2004 aa11.89□□□□□ -0.51
VTI1A-204ENST00000480057 A0A0A6YYK5 440 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-204ENST00000480057 RCCD1A6NED2 376 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 TTLL13PA6NNM8 815 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 DDX3XO00571 662 aaKnown RBP eCLIP11.88□□□□□ -0.514e-10■□□□□ 10.6
VTI1A-204ENST00000480057 SEPT4O43236 478 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 URI1O94763 535 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-204ENST00000480057 GNRH1P01148 92 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 HLA-DRAP01903 254 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 TBXAS1P24557 533 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-204ENST00000480057 HOXD10P28358 340 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 PIK3CAP42336 1068 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 FLT3LGP49771 235 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 TUBB4BP68371 445 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 PURAQ00577 322 aaKnown RBP11.88□□□□□ -0.51
VTI1A-204ENST00000480057 SP3Q02447 781 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 IFI16Q16666 785 aaKnown RBP11.88□□□□□ -0.51
VTI1A-204ENST00000480057 DUOXA2Q1HG44 320 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 DCAF4L1Q3SXM0 396 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 TDRD10Q5VZ19 366 aaKnown RBP11.88□□□□□ -0.51
VTI1A-204ENST00000480057 ALKBH5Q6P6C2 394 aaKnown RBP11.88□□□□□ -0.51
VTI1A-204ENST00000480057 CD302Q8IX05 232 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 PPM1KQ8N3J5 372 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 UBE2Q2Q8WVN8 375 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 NLRP7Q8WX94 980 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 TRIB2Q92519 343 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 KREMEN1Q96MU8 473 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 NOX5Q96PH1 765 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 ALS2CR12Q96Q35 445 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 POP1Q99575 1024 aaKnown RBP11.88□□□□□ -0.51
VTI1A-204ENST00000480057 MTG1Q9BT17 334 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-204ENST00000480057 GCOM2Q9BZD3 368 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-204ENST00000480057 IRX2Q9BZI1 471 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-204ENST00000480057 CDT1Q9H211 546 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 ADAMTS10Q9H324 1103 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 ASB7Q9H672 318 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 MINDY3Q9H8M7 445 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 TOPORSQ9NS56 1045 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-204ENST00000480057 SETD4Q9NVD3 440 aa11.88□□□□□ -0.51
VTI1A-204ENST00000480057 C17orf102A2RUQ5 167 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 B4GALT5O43286 388 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 ERLIN2O94905 339 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 ABL1P00519 1130 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 VTNP04004 478 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 GJB1P08034 283 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 MYL3P08590 195 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 IQCF3P0C7M6 154 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 CYP2C9P11712 490 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 PRLRP16471 622 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 TNFAIP3P21580 790 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 AXLP30530 894 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 MAP2K2P36507 400 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 APLP1P51693 650 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 WNT7BP56706 349 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 BPIFB4P59827 614 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 NCBP1Q09161 790 aaKnown RBP11.87□□□□□ -0.51
VTI1A-204ENST00000480057 BIRC3Q13489 604 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 ARHGAP44Q17R89 818 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 TMEM132AQ24JP5 1023 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 ZBTB41Q5SVQ8 909 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 PAPD7Q5XG87 772 aaKnown RBP11.87□□□□□ -0.51
VTI1A-204ENST00000480057 EEF1DP3Q658K8 133 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 ZBTB33Q86T24 672 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 ZNF677Q86XU0 584 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 NT5DC4Q86YG4 428 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 TRPV1Q8NER1 839 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 TAF4BQ92750 862 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 AGPAT1Q99943 283 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 PDZD7Q9H5P4 517 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 RPF1Q9H9Y2 349 aaKnown RBP11.87□□□□□ -0.51
VTI1A-204ENST00000480057 TRIM10Q9UDY6 481 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 TSKSQ9UJT2 592 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 CDC23Q9UJX2 597 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 JRKLQ9Y4A0 524 aa11.87□□□□□ -0.51
VTI1A-204ENST00000480057 PTPRJQ12913 1337 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 A0A1B0GUA9 196 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 TSPAN1O60635 241 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 PHACTR2O75167 634 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 LRRN2O75325 713 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 GPR32O75388 356 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 VNN1O95497 513 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 TNNC2P02585 160 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 H2AFZP0C0S5 128 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 HARSP12081 509 aaKnown RBP11.86□□□□□ -0.51
VTI1A-204ENST00000480057 ARF4P18085 180 aaPredicted RBP11.86□□□□□ -0.51
VTI1A-204ENST00000480057 CST5P28325 142 aaPredicted RBP11.86□□□□□ -0.51
VTI1A-204ENST00000480057 TNFSF9P41273 254 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 AMPD2Q01433 879 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 PRKCZQ05513 592 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 TCEAL1Q15170 157 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 WHAMMP3Q1A5X7 153 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 TAF2Q6P1X5 1199 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms