RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 HYOU1Q9Y4L1 999 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 SYNJ2BP-COX16A0A087WUM0 186 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.38□□□□□ -1.39
CPS1-207ENST00000479988 TTC26A0AVF1 554 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 PP2D1A8MPX8 630 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 TMEM110-MUSTN1A8MSY1 372 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 IL18RAPO95256 599 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 ARP10275 920 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 ST8SIA6P61647 398 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 PLD1Q13393 1074 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 SEPT7Q16181 437 aaKnown RBP6.38□□□□□ -1.39
CPS1-207ENST00000479988 PPP2R5EQ16537 467 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 PPM1LQ5SGD2 360 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 CENPPQ6IPU0 288 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 PPP1R2P3Q6NXS1 205 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 CD302Q8IX05 232 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 RNF10Q8N5U6 811 aaKnown RBP6.38□□□□□ -1.39
CPS1-207ENST00000479988 GABPB2Q8TAK5 448 aaPredicted RBP6.38□□□□□ -1.39
CPS1-207ENST00000479988 TSC1Q92574 1164 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 CELF4Q9BZC1 486 aaKnown RBP6.38□□□□□ -1.39
CPS1-207ENST00000479988 COX16Q9P0S2 106 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 GABRQQ9UN88 632 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 IPPQ9Y573 584 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 A0A087WZ62 844 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 SART1O43290 800 aaKnown RBP6.38□□□□□ -1.39
CPS1-207ENST00000479988 SNHG28P0DPA3 235 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 BMP6P22004 513 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 GRIK1P39086 918 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 PLCB4Q15147 1175 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 LRRC41Q15345 812 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 TTI2Q6NXR4 508 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 SCYL2Q6P3W7 929 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 TIAM2Q8IVF5 1701 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 SYCE1Q8N0S2 351 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 C4orf32Q8N8J7 132 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 PRPF31Q8WWY3 499 aaKnown RBP6.38□□□□□ -1.39
CPS1-207ENST00000479988 NAP1L3Q99457 506 aaPredicted RBP6.38□□□□□ -1.39
CPS1-207ENST00000479988 FDXACB1Q9BRP7 624 aaPredicted RBP6.38□□□□□ -1.39
CPS1-207ENST00000479988 CALCOCO1Q9P1Z2 691 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 TTLL3Q9Y4R7 772 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 MSH4O15457 936 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 SH3BP5O60239 455 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 OPA1O60313 960 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 LGR5O75473 907 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 SERPING1P05155 500 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 CD44P16070 742 aaKnown RBP6.38□□□□□ -1.39
CPS1-207ENST00000479988 CYP11B2P19099 503 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 RFC2P35250 354 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 RNASE9P60153 205 aaKnown RBP6.38□□□□□ -1.39
CPS1-207ENST00000479988 RPL10AP62906 217 aaKnown RBP6.38□□□□□ -1.39
CPS1-207ENST00000479988 COASYQ13057 564 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 CFAP221Q4G0U5 840 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 ANKRD40Q6AI12 368 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 TYW1BQ6NUM6 668 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 C17orf99Q6UX52 265 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 TOGARAM2Q6ZUX3 1019 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 UCMAQ8WVF2 138 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 NHEJ1Q9H9Q4 299 aaPredicted RBP6.38□□□□□ -1.39
CPS1-207ENST00000479988 CEP72Q9P209 647 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 DDX41Q9UJV9 622 aaKnown RBP6.38□□□□□ -1.39
CPS1-207ENST00000479988 GOLGA6L10A0A0M3HER8 536 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.37□□□□□ -1.39
CPS1-207ENST00000479988 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.37□□□□□ -1.39
CPS1-207ENST00000479988 SSU72P8A0A1W2PR75 194 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 SPOPO43791 374 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 AFPP02771 609 aaKnown RBP6.37□□□□□ -1.39
CPS1-207ENST00000479988 GYPCP04921 128 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 ACRP10323 421 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 RPA1P27694 616 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 AVPR1AP37288 418 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 GRB14Q14449 540 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 NPY5RQ15761 445 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 EXOC3L4Q17RC7 722 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 TRIM60Q495X7 471 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 CTXN3Q4LDR2 81 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 ATAT1Q5SQI0 421 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 CHRDL2Q6WN34 429 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 CCDC149Q6ZUS6 474 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 LRRC43Q8N309 656 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 CSGALNACT1Q8TDX6 532 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 LSM14BQ9BX40 385 aaKnown RBP6.37□□□□□ -1.39
CPS1-207ENST00000479988 DYRK4Q9NR20 520 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 DSEQ9UL01 958 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 Q9Y3F1 56 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 MRFAP1Q9Y605 127 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 TRIM49BA6NDI0 452 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 MYMKA6NI61 221 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 PDXKO00764 312 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 TADA3O75528 432 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 MMP3P08254 477 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 FOSL2P15408 326 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 EIF4BP23588 611 aaKnown RBP6.37□□□□□ -1.39
CPS1-207ENST00000479988 GBP1P32455 592 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 CYP2C18P33260 490 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 NAMPTP43490 491 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 TAF6P49848 677 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 ATXN3P54252 364 aaPredicted RBP6.37□□□□□ -1.39
CPS1-207ENST00000479988 STK4Q13043 487 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 NFE2Q16621 373 aaPredicted RBP6.37□□□□□ -1.39
CPS1-207ENST00000479988 NDUFAF2Q8N183 169 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms