RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 CHMP4BQ9H444 224 aaKnown RBP13.74□□□□□ -0.21
HDAC8-217ENST00000478743 TMEM9BQ9NQ34 198 aa13.74□□□□□ -0.21
HDAC8-217ENST00000478743 TRPV5Q9NQA5 729 aa13.74□□□□□ -0.21
HDAC8-217ENST00000478743 SUCLA2Q9P2R7 463 aaPredicted RBP13.74□□□□□ -0.21
HDAC8-217ENST00000478743 RAXQ9Y2V3 346 aa13.74□□□□□ -0.21
HDAC8-217ENST00000478743 TNRC6BQ9UPQ9 1833 aaKnown RBP13.74□□□□□ -0.21
HDAC8-217ENST00000478743 APC2O95996 2303 aa13.73□□□□□ -0.21
HDAC8-217ENST00000478743 ADAMTS9Q9P2N4 1935 aa13.73□□□□□ -0.21
HDAC8-217ENST00000478743 MOSPD3O75425 235 aa13.73□□□□□ -0.21
HDAC8-217ENST00000478743 STBD1O95210 358 aa13.73□□□□□ -0.21
HDAC8-217ENST00000478743 KIF4AO95239 1232 aa13.73□□□□□ -0.21
HDAC8-217ENST00000478743 GJA1P17302 382 aa13.73□□□□□ -0.21
HDAC8-217ENST00000478743 PSMC3P17980 439 aa13.73□□□□□ -0.21
HDAC8-217ENST00000478743 CREMQ03060 361 aa13.73□□□□□ -0.21
HDAC8-217ENST00000478743 CCINQ13939 588 aa13.73□□□□□ -0.21
HDAC8-217ENST00000478743 PON2Q15165 354 aa13.73□□□□□ -0.21
HDAC8-217ENST00000478743 NIPA1Q7RTP0 329 aa13.73□□□□□ -0.21
HDAC8-217ENST00000478743 ZNF410Q86VK4 478 aa13.73□□□□□ -0.21
HDAC8-217ENST00000478743 MDM1Q8TC05 714 aa13.73□□□□□ -0.21
HDAC8-217ENST00000478743 IGDCC4Q8TDY8 1250 aa13.73□□□□□ -0.21
HDAC8-217ENST00000478743 SNTG2Q9NY99 539 aa13.73□□□□□ -0.21
HDAC8-217ENST00000478743 SEPT9Q9UHD8 586 aaPredicted RBP13.73□□□□□ -0.21
HDAC8-217ENST00000478743 MYO16Q9Y6X6 1858 aa13.73□□□□□ -0.21
HDAC8-217ENST00000478743 PCNX2A6NKB5 2137 aa13.73□□□□□ -0.21
HDAC8-217ENST00000478743 CFAP46Q8IYW2 2715 aa13.73□□□□□ -0.21
HDAC8-217ENST00000478743 SHROOM3Q8TF72 1996 aa13.72□□□□□ -0.21
HDAC8-217ENST00000478743 ABCA7Q8IZY2 2146 aa13.72□□□□□ -0.21
HDAC8-217ENST00000478743 SPECC1L-ADORA2AF8WAN1 911 aa13.72□□□□□ -0.21
HDAC8-217ENST00000478743 CTHP32929 405 aa13.72□□□□□ -0.21
HDAC8-217ENST00000478743 ZNF76P36508 570 aa13.72□□□□□ -0.21
HDAC8-217ENST00000478743 SIM1P81133 766 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-217ENST00000478743 C19orf57Q0VDD7 668 aa13.72□□□□□ -0.21
HDAC8-217ENST00000478743 FAM171A1Q5VUB5 890 aa13.72□□□□□ -0.21
HDAC8-217ENST00000478743 GPIHBP1Q8IV16 184 aa13.72□□□□□ -0.21
HDAC8-217ENST00000478743 SMAP1Q8IYB5 467 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-217ENST00000478743 CTCFLQ8NI51 663 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-217ENST00000478743 CRYGNQ8WXF5 182 aa13.72□□□□□ -0.21
HDAC8-217ENST00000478743 CORO1BQ9BR76 489 aa13.72□□□□□ -0.21
HDAC8-217ENST00000478743 TTPALQ9BTX7 342 aa13.72□□□□□ -0.21
HDAC8-217ENST00000478743 NXF3Q9H4D5 531 aaKnown RBP13.72□□□□□ -0.21
HDAC8-217ENST00000478743 SAMM50Q9Y512 469 aa13.72□□□□□ -0.21
HDAC8-217ENST00000478743 THADAQ6YHU6 1953 aa13.72□□□□□ -0.21
HDAC8-217ENST00000478743 MYO18BQ8IUG5 2567 aa13.72□□□□□ -0.21
HDAC8-217ENST00000478743 SF3B1O75533 1304 aaKnown RBP eCLIP13.71□□□□□ -0.213e-6■■■■■ 104.6
HDAC8-217ENST00000478743 FAM221BA6H8Z2 402 aa13.71□□□□□ -0.21
HDAC8-217ENST00000478743 ZNF263O14978 683 aa13.71□□□□□ -0.21
HDAC8-217ENST00000478743 TADA2AO75478 443 aa13.71□□□□□ -0.21
HDAC8-217ENST00000478743 CYP21A2P08686 494 aa13.71□□□□□ -0.21
HDAC8-217ENST00000478743 OR1D2P34982 312 aa13.71□□□□□ -0.21
HDAC8-217ENST00000478743 CLK2P49760 499 aaKnown RBP13.71□□□□□ -0.21
HDAC8-217ENST00000478743 HS6ST3Q8IZP7 471 aa13.71□□□□□ -0.21
HDAC8-217ENST00000478743 GJA10Q969M2 543 aa13.71□□□□□ -0.21
HDAC8-217ENST00000478743 CPB2Q96IY4 423 aa13.71□□□□□ -0.21
HDAC8-217ENST00000478743 ZFYVE19Q96K21 471 aa13.71□□□□□ -0.21
HDAC8-217ENST00000478743 HHIPQ96QV1 700 aa13.71□□□□□ -0.21
HDAC8-217ENST00000478743 CXCL16Q9H2A7 254 aa13.71□□□□□ -0.21
HDAC8-217ENST00000478743 RIC8AQ9NPQ8 531 aa13.71□□□□□ -0.21
HDAC8-217ENST00000478743 AVENQ9NQS1 362 aaPredicted RBP13.71□□□□□ -0.21
HDAC8-217ENST00000478743 KLK14Q9P0G3 267 aa13.71□□□□□ -0.21
HDAC8-217ENST00000478743 INVSQ9Y283 1065 aa13.71□□□□□ -0.21
HDAC8-217ENST00000478743 ZNF462Q96JM2 2506 aa13.71□□□□□ -0.21
HDAC8-217ENST00000478743 ARID2Q68CP9 1835 aa13.7□□□□□ -0.22
HDAC8-217ENST00000478743 ERICH2A1L162 156 aa13.7□□□□□ -0.22
HDAC8-217ENST00000478743 MYBPHLA2RUH7 354 aa13.7□□□□□ -0.22
HDAC8-217ENST00000478743 CASTOR2A6NHX0 329 aa13.7□□□□□ -0.22
HDAC8-217ENST00000478743 HEPACAM2A8MVW5 462 aa13.7□□□□□ -0.22
HDAC8-217ENST00000478743 MEFVO15553 781 aaPredicted RBP13.7□□□□□ -0.22
HDAC8-217ENST00000478743 CHMP2AO43633 222 aa13.7□□□□□ -0.22
HDAC8-217ENST00000478743 DDAH1O94760 285 aa13.7□□□□□ -0.22
HDAC8-217ENST00000478743 AKAP5P24588 427 aa13.7□□□□□ -0.22
HDAC8-217ENST00000478743 SMARCA1P28370 1054 aa13.7□□□□□ -0.22
HDAC8-217ENST00000478743 KPNA1P52294 538 aaPredicted RBP13.7□□□□□ -0.22
HDAC8-217ENST00000478743 IRX4P78413 519 aa13.7□□□□□ -0.22
HDAC8-217ENST00000478743 HNRNPUQ00839 825 aaKnown RBP eCLIP13.7□□□□□ -0.22
HDAC8-217ENST00000478743 RAB33AQ14088 237 aa13.7□□□□□ -0.22
HDAC8-217ENST00000478743 HSP90AA2PQ14568 343 aaPredicted RBP13.7□□□□□ -0.22
HDAC8-217ENST00000478743 DGKKQ5KSL6 1271 aa13.7□□□□□ -0.22
HDAC8-217ENST00000478743 ANKRD45Q5TZF3 282 aa13.7□□□□□ -0.22
HDAC8-217ENST00000478743 PLA2G4FQ68DD2 849 aa13.7□□□□□ -0.22
HDAC8-217ENST00000478743 SMARCD2Q92925 531 aa13.7□□□□□ -0.22
HDAC8-217ENST00000478743 LENG9Q96B70 501 aa13.7□□□□□ -0.22
HDAC8-217ENST00000478743 HNRNPABQ99729 332 aaKnown RBP13.7□□□□□ -0.22
HDAC8-217ENST00000478743 INO80BQ9C086 356 aaPredicted RBP13.7□□□□□ -0.22
HDAC8-217ENST00000478743 NRBP2Q9NSY0 501 aa13.7□□□□□ -0.22
HDAC8-217ENST00000478743 GTSE1Q9NYZ3 720 aa13.7□□□□□ -0.22
HDAC8-217ENST00000478743 WDR64B1ANS9 1081 aa13.69□□□□□ -0.22
HDAC8-217ENST00000478743 AKAP3O75969 853 aa13.69□□□□□ -0.22
HDAC8-217ENST00000478743 ADCY7P51828 1080 aa13.69□□□□□ -0.22
HDAC8-217ENST00000478743 JAKMIP3Q5VZ66 844 aa13.69□□□□□ -0.22
HDAC8-217ENST00000478743 RAB44Q7Z6P3 723 aaPredicted RBP13.69□□□□□ -0.22
HDAC8-217ENST00000478743 PIP4P1Q86T03 277 aa13.69□□□□□ -0.22
HDAC8-217ENST00000478743 ZSCAN18Q8TBC5 510 aaPredicted RBP13.69□□□□□ -0.22
HDAC8-217ENST00000478743 DEPDC1BQ8WUY9 529 aa13.69□□□□□ -0.22
HDAC8-217ENST00000478743 LRRC3BQ96PB8 259 aa13.69□□□□□ -0.22
HDAC8-217ENST00000478743 MAP3K14Q99558 947 aa13.69□□□□□ -0.22
HDAC8-217ENST00000478743 DISC1Q9NRI5 854 aa13.69□□□□□ -0.22
HDAC8-217ENST00000478743 BMP2KQ9NSY1 1161 aaPredicted RBP13.69□□□□□ -0.22
HDAC8-217ENST00000478743 TBC1D22BQ9NU19 505 aa13.69□□□□□ -0.22
HDAC8-217ENST00000478743 TCEAL9Q9UHQ7 104 aa13.69□□□□□ -0.22
HDAC8-217ENST00000478743 CDY1Q9Y6F8 540 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms