RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 ACO2Q99798 780 aaKnown RBP25.09■■□□□ 1.61
C9orf3-216ENST00000478603 TTPALQ9BTX7 342 aa25.09■■□□□ 1.61
C9orf3-216ENST00000478603 KMT5AQ9NQR1 393 aa25.09■■□□□ 1.61
C9orf3-216ENST00000478603 ARHGAP28Q9P2N2 729 aa25.09■■□□□ 1.61
C9orf3-216ENST00000478603 TNFSF13BQ9Y275 285 aa25.09■■□□□ 1.61
C9orf3-216ENST00000478603 DOCK8Q8NF50 2099 aa25.09■■□□□ 1.61
C9orf3-216ENST00000478603 VWA3AA6NCI4 1184 aa25.08■■□□□ 1.61
C9orf3-216ENST00000478603 N4BP1O75113 896 aaKnown RBP25.08■■□□□ 1.61
C9orf3-216ENST00000478603 OSTNP61366 133 aa25.08■■□□□ 1.61
C9orf3-216ENST00000478603 LILRA6Q6PI73 481 aa25.08■■□□□ 1.61
C9orf3-216ENST00000478603 DRC1Q96MC2 740 aa25.08■■□□□ 1.61
C9orf3-216ENST00000478603 TARS2Q9BW92 718 aaKnown RBP25.08■■□□□ 1.61
C9orf3-216ENST00000478603 CDT1Q9H211 546 aa25.08■■□□□ 1.61
C9orf3-216ENST00000478603 TMEM134Q9H6X4 195 aa25.08■■□□□ 1.61
C9orf3-216ENST00000478603 SMC3Q9UQE7 1217 aa25.08■■□□□ 1.61
C9orf3-216ENST00000478603 CITO14578 2027 aa25.08■■□□□ 1.61
C9orf3-216ENST00000478603 AVPR2P30518 371 aa25.07■■□□□ 1.6
C9orf3-216ENST00000478603 CREMQ03060 361 aa25.07■■□□□ 1.6
C9orf3-216ENST00000478603 ZNF568Q3ZCX4 644 aa25.07■■□□□ 1.6
C9orf3-216ENST00000478603 HDAC7Q8WUI4 952 aa25.07■■□□□ 1.6
C9orf3-216ENST00000478603 PPP1R10Q96QC0 940 aaKnown RBP25.07■■□□□ 1.6
C9orf3-216ENST00000478603 CLSTN3Q9BQT9 956 aa25.07■■□□□ 1.6
C9orf3-216ENST00000478603 MRPL4Q9BYD3 311 aaKnown RBP25.07■■□□□ 1.6
C9orf3-216ENST00000478603 NT5C3AQ9H0P0 336 aa25.07■■□□□ 1.6
C9orf3-216ENST00000478603 PLEKHA4Q9H4M7 779 aa25.07■■□□□ 1.6
C9orf3-216ENST00000478603 GOLGA2P5Q9HBQ8 144 aa25.07■■□□□ 1.6
C9orf3-216ENST00000478603 WDR6Q9NNW5 1121 aaKnown RBP25.07■■□□□ 1.6
C9orf3-216ENST00000478603 CLUHO75153 1309 aa25.07■■□□□ 1.6
C9orf3-216ENST00000478603 SLC16A4O15374 487 aa25.06■■□□□ 1.6
C9orf3-216ENST00000478603 PSMD5Q16401 504 aa25.06■■□□□ 1.6
C9orf3-216ENST00000478603 HYIQ5T013 277 aa25.06■■□□□ 1.6
C9orf3-216ENST00000478603 APBB1IPQ7Z5R6 666 aaPredicted RBP25.06■■□□□ 1.6
C9orf3-216ENST00000478603 LNX1Q8TBB1 728 aaPredicted RBP25.06■■□□□ 1.6
C9orf3-216ENST00000478603 PIK3R5Q8WYR1 880 aa25.06■■□□□ 1.6
C9orf3-216ENST00000478603 TBC1D32Q96NH3 1257 aa25.06■■□□□ 1.6
C9orf3-216ENST00000478603 PIDD1Q9HB75 910 aa25.06■■□□□ 1.6
C9orf3-216ENST00000478603 PTPRHQ9HD43 1115 aa25.06■■□□□ 1.6
C9orf3-216ENST00000478603 PIEZO1Q92508 2521 aa25.06■■□□□ 1.6
C9orf3-216ENST00000478603 ADAM12O43184 909 aa25.05■■□□□ 1.6
C9orf3-216ENST00000478603 GUCY2CP25092 1073 aa25.05■■□□□ 1.6
C9orf3-216ENST00000478603 GBP2P32456 591 aaPredicted RBP25.05■■□□□ 1.6
C9orf3-216ENST00000478603 GRM5P41594 1212 aa25.05■■□□□ 1.6
C9orf3-216ENST00000478603 MCM2P49736 904 aa25.05■■□□□ 1.6
C9orf3-216ENST00000478603 CLCNKBP51801 687 aa25.05■■□□□ 1.6
C9orf3-216ENST00000478603 CYP26C1Q6V0L0 522 aa25.05■■□□□ 1.6
C9orf3-216ENST00000478603 RHOBTB2Q9BYZ6 727 aa25.05■■□□□ 1.6
C9orf3-216ENST00000478603 KCNK12Q9HB15 430 aa25.05■■□□□ 1.6
C9orf3-216ENST00000478603 SMIM28A0A1B0GU29 152 aa25.04■■□□□ 1.6
C9orf3-216ENST00000478603 B3GAT3O94766 335 aa25.04■■□□□ 1.6
C9orf3-216ENST00000478603 C1RP00736 705 aa25.04■■□□□ 1.6
C9orf3-216ENST00000478603 TCF15Q12870 199 aa25.04■■□□□ 1.6
C9orf3-216ENST00000478603 ELAVL2Q12926 359 aaKnown RBP25.04■■□□□ 1.6
C9orf3-216ENST00000478603 LARP1BQ659C4 914 aaKnown RBP25.04■■□□□ 1.6
C9orf3-216ENST00000478603 CD300LGQ6UXG3 332 aa25.04■■□□□ 1.6
C9orf3-216ENST00000478603 SYT2Q8N9I0 419 aaPredicted RBP25.04■■□□□ 1.6
C9orf3-216ENST00000478603 MYADMQ96S97 322 aa25.04■■□□□ 1.6
C9orf3-216ENST00000478603 PHOX2BQ99453 314 aa25.04■■□□□ 1.6
C9orf3-216ENST00000478603 CCDC94Q9BW85 323 aaPredicted RBP25.04■■□□□ 1.6
C9orf3-216ENST00000478603 PRKD2Q9BZL6 878 aa25.04■■□□□ 1.6
C9orf3-216ENST00000478603 ZDHHC7Q9NXF8 308 aa25.04■■□□□ 1.6
C9orf3-216ENST00000478603 RBM19Q9Y4C8 960 aaKnown RBP25.04■■□□□ 1.6
C9orf3-216ENST00000478603 NPHP3-ACAD11A0A0J9YXS1 232 aa25.03■■□□□ 1.6
C9orf3-216ENST00000478603 ABLIM1O14639 778 aa25.03■■□□□ 1.6
C9orf3-216ENST00000478603 ZMYND10O75800 440 aa25.03■■□□□ 1.6
C9orf3-216ENST00000478603 PAPLNO95428 1278 aa25.03■■□□□ 1.6
C9orf3-216ENST00000478603 HARSP12081 509 aaKnown RBP25.03■■□□□ 1.6
C9orf3-216ENST00000478603 MRE11P49959 708 aa25.03■■□□□ 1.6
C9orf3-216ENST00000478603 YARSP54577 528 aaKnown RBP25.03■■□□□ 1.6
C9orf3-216ENST00000478603 SLC12A3P55017 1021 aa25.03■■□□□ 1.6
C9orf3-216ENST00000478603 CACNB1Q02641 598 aaPredicted RBP25.03■■□□□ 1.6
C9orf3-216ENST00000478603 SOX4Q06945 474 aaPredicted RBP25.03■■□□□ 1.6
C9orf3-216ENST00000478603 TDGQ13569 410 aa25.03■■□□□ 1.6
C9orf3-216ENST00000478603 ARL6IP4Q66PJ3 421 aaKnown RBP25.03■■□□□ 1.6
C9orf3-216ENST00000478603 C3orf58Q8NDZ4 430 aa25.03■■□□□ 1.6
C9orf3-216ENST00000478603 RSAD2Q8WXG1 361 aa25.03■■□□□ 1.6
C9orf3-216ENST00000478603 STAMQ92783 540 aa25.03■■□□□ 1.6
C9orf3-216ENST00000478603 CDK5RAP3Q96JB5 506 aa25.03■■□□□ 1.6
C9orf3-216ENST00000478603 ZBTB45Q96K62 511 aaPredicted RBP25.03■■□□□ 1.6
C9orf3-216ENST00000478603 TCHPQ9BT92 498 aa25.03■■□□□ 1.6
C9orf3-216ENST00000478603 TIPINQ9BVW5 301 aa25.03■■□□□ 1.6
C9orf3-216ENST00000478603 C17orf75Q9HAS0 396 aa25.03■■□□□ 1.6
C9orf3-216ENST00000478603 FBXW11Q9UKB1 542 aa25.03■■□□□ 1.6
C9orf3-216ENST00000478603 TMEM189-UBE2V1I3L0A0 370 aa25.02■■□□□ 1.6
C9orf3-216ENST00000478603 I3L4J1 428 aa25.02■■□□□ 1.6
C9orf3-216ENST00000478603 PLA2G4BP0C869 781 aa25.02■■□□□ 1.6
C9orf3-216ENST00000478603 PROZP22891 400 aa25.02■■□□□ 1.6
C9orf3-216ENST00000478603 PTPN5P54829 565 aa25.02■■□□□ 1.6
C9orf3-216ENST00000478603 UPP1Q16831 310 aa25.02■■□□□ 1.6
C9orf3-216ENST00000478603 TMEM119Q4V9L6 283 aa25.02■■□□□ 1.6
C9orf3-216ENST00000478603 DCLRE1AQ6PJP8 1040 aa25.02■■□□□ 1.6
C9orf3-216ENST00000478603 ALKAL1Q6UXT8 129 aa25.02■■□□□ 1.6
C9orf3-216ENST00000478603 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.02■■□□□ 1.6
C9orf3-216ENST00000478603 PRRX2Q99811 253 aa25.02■■□□□ 1.6
C9orf3-216ENST00000478603 NTPCRQ9BSD7 190 aaKnown RBP25.02■■□□□ 1.6
C9orf3-216ENST00000478603 TOPORSQ9NS56 1045 aaPredicted RBP25.02■■□□□ 1.6
C9orf3-216ENST00000478603 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.02■■□□□ 1.6
C9orf3-216ENST00000478603 PDCD11Q14690 1871 aaKnown RBP25.02■■□□□ 1.6
C9orf3-216ENST00000478603 MCF2P10911 925 aa25.01■■□□□ 1.59
C9orf3-216ENST00000478603 PLS3P13797 630 aa25.01■■□□□ 1.59
C9orf3-216ENST00000478603 FGFR3P22607 806 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms