RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ERCC4Q92889 916 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-215ENST00000478531 P2RX5Q93086 422 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 TMEM169Q96HH4 297 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 CCDC34Q96HJ3 373 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 STRA6Q9BX79 667 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 SPG21Q9NZD8 308 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 A0A0B4J269 797 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 F8W810 466 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 OGTO15294 1046 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 INPPL1O15357 1258 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 EIF3DO15371 548 aaKnown RBP eCLIP7.52□□□□□ -1.21
BRCA1-215ENST00000478531 KINO60870 393 aaKnown RBP7.52□□□□□ -1.21
BRCA1-215ENST00000478531 PRPF40AO75400 957 aaKnown RBP7.52□□□□□ -1.21
BRCA1-215ENST00000478531 MYL1P05976 194 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 THP07101 528 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 DNAJB1P25685 340 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 ACOT2P49753 483 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 KRT17Q04695 432 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 EHHADHQ08426 723 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 DPYDQ12882 1025 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 SKIV2LQ15477 1246 aaKnown RBP7.52□□□□□ -1.21
BRCA1-215ENST00000478531 PLPP4Q5VZY2 271 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 COLGALT2Q8IYK4 626 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 TMEM87AQ8NBN3 555 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 ENGASEQ8NFI3 743 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 HASPINQ8TF76 798 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 BCL7CQ8WUZ0 217 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-215ENST00000478531 KCNN1Q92952 543 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 CCDC47Q96A33 483 aaKnown RBP7.52□□□□□ -1.21
BRCA1-215ENST00000478531 MRPL38Q96DV4 380 aaKnown RBP7.52□□□□□ -1.21
BRCA1-215ENST00000478531 FAM212AQ96EL1 285 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 SAAL1Q96ER3 474 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 SNX27Q96L92 541 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 PCIF1Q9H4Z3 704 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 GOLGA2P5Q9HBQ8 144 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 ENTPD7Q9NQZ7 604 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 AGO2Q9UKV8 859 aaKnown RBP7.52□□□□□ -1.21
BRCA1-215ENST00000478531 PCDHGC5Q9Y5F6 944 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 BDP1A6H8Y1 2624 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 VWA8A3KMH1 1905 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 MUC3AQ02505 3323 aa7.52□□□□□ -1.21
BRCA1-215ENST00000478531 NRP1O14786 923 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 GALTP07902 379 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 CLTAP09496 248 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 ADSSP30520 456 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 UBE2HP62256 183 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 PPP2R3AQ06190 1150 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 SPAG1Q07617 926 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 DSC1Q08554 894 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 STK4Q13043 487 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 TUSC3Q13454 348 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 ENOX2Q16206 610 aaKnown RBP7.51□□□□□ -1.21
BRCA1-215ENST00000478531 SLFN12LQ6IEE8 588 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 KANK3Q6NY19 840 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 ARMCX5Q6P1M9 558 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 EPM2AIP1Q7L775 607 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-215ENST00000478531 SLC39A11Q8N1S5 342 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 KIAA0895Q8NCT3 520 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 ZSWIM2Q8NEG5 633 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 SPPL3Q8TCT6 385 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 MICAL1Q8TDZ2 1067 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 SCFD1Q8WVM8 642 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 IGSF21Q96ID5 467 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 PAAF1Q9BRP4 392 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 CBWD1Q9BRT8 395 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 FAM213AQ9BRX8 229 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 TMEM206Q9H813 350 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 RPF1Q9H9Y2 349 aaKnown RBP7.51□□□□□ -1.21
BRCA1-215ENST00000478531 TLR9Q9NR96 1032 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 HOOK1Q9UJC3 728 aaKnown RBP7.51□□□□□ -1.21
BRCA1-215ENST00000478531 FAN1Q9Y2M0 1017 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 CUL9Q8IWT3 2517 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 UBE4BO95155 1302 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 SMIM28A0A1B0GU29 152 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 GOLGA8IPA6NC78 632 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 GOLGA8JA6NMD2 632 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 MEFVO15553 781 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-215ENST00000478531 FAM189A1O60320 539 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 ALDH2P05091 517 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 HOXD13P35453 343 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 IRS1P35568 1242 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 SLC10A6Q3KNW5 377 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 TIGD5Q53EQ6 642 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 TMC7Q7Z402 723 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 TMEM130Q8N3G9 435 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 C18orf25Q96B23 403 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-215ENST00000478531 KIF12Q96FN5 646 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 ZMAT2Q96NC0 199 aaKnown RBP7.51□□□□□ -1.21
BRCA1-215ENST00000478531 GBP4Q96PP9 640 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 PPP1R10Q96QC0 940 aaKnown RBP7.51□□□□□ -1.21
BRCA1-215ENST00000478531 TCF25Q9BQ70 676 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 TMEM175Q9BSA9 504 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 MARCH5Q9NX47 278 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 CNTN3Q9P232 1028 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 PUF60Q9UHX1 559 aaKnown RBP7.51□□□□□ -1.21
BRCA1-215ENST00000478531 MAPK8IP1Q9UQF2 711 aa7.51□□□□□ -1.21
BRCA1-215ENST00000478531 SCN1AP35498 2009 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 LACTBL1A8MY62 500 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 CLIC2O15247 247 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 RHOBTB3O94955 611 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms