RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 NDUFV1P49821 464 aa17.04■□□□□ 0.32
HMGA1-206ENST00000478214 BMS1Q14692 1282 aaKnown RBP17.04■□□□□ 0.32
HMGA1-206ENST00000478214 CLUL1Q15846 466 aa17.04■□□□□ 0.32
HMGA1-206ENST00000478214 XKR4Q5GH76 650 aa17.04■□□□□ 0.32
HMGA1-206ENST00000478214 ALKAL1Q6UXT8 129 aa17.04■□□□□ 0.32
HMGA1-206ENST00000478214 TAS1R1Q7RTX1 841 aa17.04■□□□□ 0.32
HMGA1-206ENST00000478214 VN1R2Q8NFZ6 395 aa17.04■□□□□ 0.32
HMGA1-206ENST00000478214 SNX27Q96L92 541 aa17.04■□□□□ 0.32
HMGA1-206ENST00000478214 CDCA3Q99618 268 aaPredicted RBP17.04■□□□□ 0.32
HMGA1-206ENST00000478214 STRA6Q9BX79 667 aa17.04■□□□□ 0.32
HMGA1-206ENST00000478214 FGFBP2Q9BYJ0 223 aa17.04■□□□□ 0.32
HMGA1-206ENST00000478214 TRIM9Q9C026 710 aa17.04■□□□□ 0.32
HMGA1-206ENST00000478214 LRRC27Q9C0I9 530 aa17.04■□□□□ 0.32
HMGA1-206ENST00000478214 IKZF4Q9H2S9 585 aa17.04■□□□□ 0.32
HMGA1-206ENST00000478214 KCNH3Q9ULD8 1083 aa17.04■□□□□ 0.32
HMGA1-206ENST00000478214 CUL9Q8IWT3 2517 aa17.04■□□□□ 0.32
HMGA1-206ENST00000478214 TISP43B9A030 160 aa17.03■□□□□ 0.32
HMGA1-206ENST00000478214 ANKRD63C9JTQ0 380 aa17.03■□□□□ 0.32
HMGA1-206ENST00000478214 EFEMP2O95967 443 aa17.03■□□□□ 0.32
HMGA1-206ENST00000478214 SOD2P04179 222 aa17.03■□□□□ 0.32
HMGA1-206ENST00000478214 ABCD1P33897 745 aa17.03■□□□□ 0.32
HMGA1-206ENST00000478214 CASP5P51878 434 aa17.03■□□□□ 0.32
HMGA1-206ENST00000478214 NUCB2P80303 420 aa17.03■□□□□ 0.32
HMGA1-206ENST00000478214 AMPD3Q01432 767 aa17.03■□□□□ 0.32
HMGA1-206ENST00000478214 KCNA1Q09470 495 aa17.03■□□□□ 0.32
HMGA1-206ENST00000478214 HSP90AA2PQ14568 343 aaPredicted RBP17.03■□□□□ 0.32
HMGA1-206ENST00000478214 PTPN14Q15678 1187 aa17.03■□□□□ 0.32
HMGA1-206ENST00000478214 ADALQ6DHV7 355 aa17.03■□□□□ 0.32
HMGA1-206ENST00000478214 CCDC65Q8IXS2 484 aa17.03■□□□□ 0.32
HMGA1-206ENST00000478214 ZMAT2Q96NC0 199 aaKnown RBP17.03■□□□□ 0.32
HMGA1-206ENST00000478214 SCAND2PQ9GZW5 306 aaPredicted RBP17.03■□□□□ 0.32
HMGA1-206ENST00000478214 GDPD2Q9HCC8 539 aa17.03■□□□□ 0.32
HMGA1-206ENST00000478214 OLFML3Q9NRN5 406 aa17.03■□□□□ 0.32
HMGA1-206ENST00000478214 CLEC1BQ9P126 229 aa17.03■□□□□ 0.32
HMGA1-206ENST00000478214 STK39Q9UEW8 545 aa17.03■□□□□ 0.32
HMGA1-206ENST00000478214 ADAM28Q9UKQ2 775 aa17.03■□□□□ 0.32
HMGA1-206ENST00000478214 BARX2Q9UMQ3 279 aaPredicted RBP17.03■□□□□ 0.32
HMGA1-206ENST00000478214 IRAK3Q9Y616 596 aa17.03■□□□□ 0.32
HMGA1-206ENST00000478214 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.02■□□□□ 0.32
HMGA1-206ENST00000478214 A0A0B4J269 797 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 A0A1B0GVL5 298 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 TADA2AO75478 443 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 KIF4AO95239 1232 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 GCNT3O95395 438 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 CLTAP09496 248 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 MYBP10242 640 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 PFKFB1P16118 471 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 CMA1P23946 247 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 CASP1P29466 404 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 TNFSF9P41273 254 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 ASIC1P78348 528 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 COASYQ13057 564 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 SLC10A6Q3KNW5 377 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 TPRNQ4KMQ1 711 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 ZBTB41Q5SVQ8 909 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 PTCRAQ6ISU1 281 aaPredicted RBP17.02■□□□□ 0.32
HMGA1-206ENST00000478214 LLGL2Q6P1M3 1020 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 FUT10Q6P4F1 479 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 RNF168Q8IYW5 571 aaPredicted RBP17.02■□□□□ 0.32
HMGA1-206ENST00000478214 ADAMTS19Q8TE59 1207 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 HASPINQ8TF76 798 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 HVCN1Q96D96 273 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 C7orf25Q9BPX7 421 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 HERC2P3Q9BVR0 1158 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 GPR62Q9BZJ7 368 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 MAGEF1Q9HAY2 307 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 GOLGA2P5Q9HBQ8 144 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 CNTN3Q9P232 1028 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 SERTAD1Q9UHV2 236 aa17.02■□□□□ 0.32
HMGA1-206ENST00000478214 DLL1O00548 723 aa17.01■□□□□ 0.31
HMGA1-206ENST00000478214 C2CD2LO14523 706 aa17.01■□□□□ 0.31
HMGA1-206ENST00000478214 OGTO15294 1046 aa17.01■□□□□ 0.31
HMGA1-206ENST00000478214 FAM189A1O60320 539 aa17.01■□□□□ 0.31
HMGA1-206ENST00000478214 LILRB3O75022 631 aa17.01■□□□□ 0.31
HMGA1-206ENST00000478214 CLASP2O75122 1294 aaKnown RBP17.01■□□□□ 0.31
HMGA1-206ENST00000478214 CXCL8P10145 99 aa17.01■□□□□ 0.31
HMGA1-206ENST00000478214 KCNE1P15382 129 aa17.01■□□□□ 0.31
HMGA1-206ENST00000478214 IGFBP6P24592 240 aaPredicted RBP17.01■□□□□ 0.31
HMGA1-206ENST00000478214 AFMP43652 599 aa17.01■□□□□ 0.31
HMGA1-206ENST00000478214 SOX4Q06945 474 aaPredicted RBP17.01■□□□□ 0.31
HMGA1-206ENST00000478214 KCNC3Q14003 757 aa17.01■□□□□ 0.31
HMGA1-206ENST00000478214 L1TD1Q5T7N2 865 aaKnown RBP17.01■□□□□ 0.31
HMGA1-206ENST00000478214 CNNM4Q6P4Q7 775 aa17.01■□□□□ 0.31
HMGA1-206ENST00000478214 GRAMD1CQ8IYS0 662 aa17.01■□□□□ 0.31
HMGA1-206ENST00000478214 HPS3Q969F9 1004 aa17.01■□□□□ 0.31
HMGA1-206ENST00000478214 MSLNLQ96KJ4 702 aa17.01■□□□□ 0.31
HMGA1-206ENST00000478214 B3GALT6Q96L58 329 aa17.01■□□□□ 0.31
HMGA1-206ENST00000478214 NECAB3Q96P71 396 aaPredicted RBP17.01■□□□□ 0.31
HMGA1-206ENST00000478214 ACCSQ96QU6 501 aa17.01■□□□□ 0.31
HMGA1-206ENST00000478214 PYM1Q9BRP8 204 aaKnown RBP17.01■□□□□ 0.31
HMGA1-206ENST00000478214 MSTO1Q9BUK6 570 aa17.01■□□□□ 0.31
HMGA1-206ENST00000478214 BLZF1Q9H2G9 400 aa17.01■□□□□ 0.31
HMGA1-206ENST00000478214 PCDHB13Q9Y5F0 798 aa17.01■□□□□ 0.31
HMGA1-206ENST00000478214 TDRD15B5MCY1 1934 aaKnown RBP17.01■□□□□ 0.31
HMGA1-206ENST00000478214 FSD2A1L4K1 749 aa17■□□□□ 0.31
HMGA1-206ENST00000478214 GRXCR2A6NFK2 248 aa17■□□□□ 0.31
HMGA1-206ENST00000478214 ACTN4O43707 911 aaKnown RBP17■□□□□ 0.31
HMGA1-206ENST00000478214 URODP06132 367 aa17■□□□□ 0.31
HMGA1-206ENST00000478214 SLFN14P0C7P3 912 aa17■□□□□ 0.31
HMGA1-206ENST00000478214 GLUD2P49448 558 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms