RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 CPDO75976 1380 aa6.25□□□□□ -1.41
VPS50-214ENST00000477935 ATP7BP35670 1465 aa6.25□□□□□ -1.41
VPS50-214ENST00000477935 FMN2Q9NZ56 1722 aa6.25□□□□□ -1.41
VPS50-214ENST00000477935 CRB1P82279 1406 aa6.25□□□□□ -1.41
VPS50-214ENST00000477935 VPS8Q8N3P4 1428 aa6.25□□□□□ -1.41
VPS50-214ENST00000477935 A0A1W2PRX2 142 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 GPR39O43194 453 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 DNAJC6O75061 913 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 GAAP10253 952 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 COMTP21964 271 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 KIR2DL3P43628 341 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 GPR15P49685 360 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 CD69Q07108 199 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 FOXL1Q12952 345 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 TRIM25Q14258 630 aaKnown RBP6.24□□□□□ -1.41
VPS50-214ENST00000477935 GRM7Q14831 915 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 CCDC178Q5BJE1 867 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 CT83Q5H943 113 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 PITRM1Q5JRX3 1037 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 RNF187Q5TA31 235 aaPredicted RBP6.24□□□□□ -1.41
VPS50-214ENST00000477935 LYSMD2Q8IV50 215 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 SLC41A1Q8IVJ1 513 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 WDR66Q8TBY9 1149 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 CDK5RAP1Q96SZ6 601 aaKnown RBP6.24□□□□□ -1.41
VPS50-214ENST00000477935 FDXACB1Q9BRP7 624 aaPredicted RBP6.24□□□□□ -1.41
VPS50-214ENST00000477935 PRDM12Q9H4Q4 367 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 VTA1Q9NP79 307 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 PLA2G3Q9NZ20 509 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 TFCP2L1Q9NZI6 479 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 POGKQ9P215 609 aa6.24□□□□□ -1.41
VPS50-214ENST00000477935 GOLGA8BA8MQT2 603 aa6.23□□□□□ -1.41
VPS50-214ENST00000477935 NRP2O60462 931 aa6.23□□□□□ -1.41
VPS50-214ENST00000477935 XPAP23025 273 aaPredicted RBP6.23□□□□□ -1.41
VPS50-214ENST00000477935 PPARAQ07869 468 aa6.23□□□□□ -1.41
VPS50-214ENST00000477935 HS1BP3Q53T59 392 aa6.23□□□□□ -1.41
VPS50-214ENST00000477935 KRT40Q6A162 431 aa6.23□□□□□ -1.41
VPS50-214ENST00000477935 TOM1L2Q6ZVM7 507 aa6.23□□□□□ -1.41
VPS50-214ENST00000477935 GAREM2Q75VX8 874 aa6.23□□□□□ -1.41
VPS50-214ENST00000477935 ADGRE4PQ86SQ3 457 aa6.23□□□□□ -1.41
VPS50-214ENST00000477935 SPATS2Q86XZ4 545 aaKnown RBP6.23□□□□□ -1.41
VPS50-214ENST00000477935 PALM2Q8IXS6 379 aa6.23□□□□□ -1.41
VPS50-214ENST00000477935 CMIPQ8IY22 773 aa6.23□□□□□ -1.41
VPS50-214ENST00000477935 OR14C36Q8NHC7 312 aa6.23□□□□□ -1.41
VPS50-214ENST00000477935 RSAD2Q8WXG1 361 aa6.23□□□□□ -1.41
VPS50-214ENST00000477935 TMEM176AQ96HP8 235 aa6.23□□□□□ -1.41
VPS50-214ENST00000477935 ACAP3Q96P50 834 aa6.23□□□□□ -1.41
VPS50-214ENST00000477935 UIMC1Q96RL1 719 aa6.23□□□□□ -1.41
VPS50-214ENST00000477935 C14orf93Q9H972 538 aaKnown RBP6.23□□□□□ -1.41
VPS50-214ENST00000477935 EVLQ9UI08 416 aaPredicted RBP6.23□□□□□ -1.41
VPS50-214ENST00000477935 TSC22D4Q9Y3Q8 395 aa6.23□□□□□ -1.41
VPS50-214ENST00000477935 YTHDC2Q9H6S0 1430 aaKnown RBP6.23□□□□□ -1.41
VPS50-214ENST00000477935 ADGRF5Q8IZF2 1346 aa6.23□□□□□ -1.41
VPS50-214ENST00000477935 CLTCL1P53675 1640 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 MUSKO15146 869 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 LY86O95711 162 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 GCP02774 474 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 JUNP05412 331 aaKnown RBP6.22□□□□□ -1.41
VPS50-214ENST00000477935 LPLP06858 475 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 VSIG10L2P0DP72 767 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 ENPP1P22413 925 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 MSX2P35548 267 aaPredicted RBP6.22□□□□□ -1.41
VPS50-214ENST00000477935 LGALS4P56470 323 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 CDSNQ15517 529 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 FSCN1Q16658 493 aaKnown RBP6.22□□□□□ -1.41
VPS50-214ENST00000477935 RNF219Q5W0B1 726 aaPredicted RBP6.22□□□□□ -1.41
VPS50-214ENST00000477935 ZNF662Q6ZS27 426 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 Q6ZSN1 163 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 UNC5BQ8IZJ1 945 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 PIK3C3Q8NEB9 887 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 ATL2Q8NHH9 583 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 LMBR1Q8WVP7 490 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 EAF2Q96CJ1 260 aaPredicted RBP6.22□□□□□ -1.41
VPS50-214ENST00000477935 PRAM1Q96QH2 718 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 ADOQ96SZ5 270 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 GPR20Q99678 358 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 KRTAP9-3Q9BYQ3 159 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 KCTD10Q9H3F6 313 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 IL23AQ9NPF7 189 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 PNPLA7Q6ZV29 1317 aa6.22□□□□□ -1.41
VPS50-214ENST00000477935 PARP4Q9UKK3 1724 aaKnown RBP6.22□□□□□ -1.41
VPS50-214ENST00000477935 C1QTNF3-AMACRE9PGA6 284 aa6.21□□□□□ -1.42
VPS50-214ENST00000477935 ACO1P21399 889 aaKnown RBP6.21□□□□□ -1.42
VPS50-214ENST00000477935 RGS19P49795 217 aa6.21□□□□□ -1.42
VPS50-214ENST00000477935 NRG3P56975 720 aa6.21□□□□□ -1.42
VPS50-214ENST00000477935 MGAT5Q09328 741 aa6.21□□□□□ -1.42
VPS50-214ENST00000477935 UGT8Q16880 541 aa6.21□□□□□ -1.42
VPS50-214ENST00000477935 LMBR1LQ6UX01 489 aa6.21□□□□□ -1.42
VPS50-214ENST00000477935 MAMDC4Q6UXC1 1216 aa6.21□□□□□ -1.42
VPS50-214ENST00000477935 GLB1L2Q8IW92 636 aa6.21□□□□□ -1.42
VPS50-214ENST00000477935 EDAQ92838 391 aa6.21□□□□□ -1.42
VPS50-214ENST00000477935 MCM8Q9UJA3 840 aa6.21□□□□□ -1.42
VPS50-214ENST00000477935 RCAN3Q9UKA8 241 aa6.21□□□□□ -1.42
VPS50-214ENST00000477935 CDY2AQ9Y6F7 541 aa6.21□□□□□ -1.42
VPS50-214ENST00000477935 PEAK1Q9H792 1746 aa6.21□□□□□ -1.42
VPS50-214ENST00000477935 ALS2Q96Q42 1657 aa6.2□□□□□ -1.42
VPS50-214ENST00000477935 GOLGA8AA7E2F4 631 aa6.2□□□□□ -1.42
VPS50-214ENST00000477935 MTSS1O43312 755 aa6.2□□□□□ -1.42
VPS50-214ENST00000477935 ALDH1A2O94788 518 aa6.2□□□□□ -1.42
VPS50-214ENST00000477935 PRKD3O94806 890 aa6.2□□□□□ -1.42
VPS50-214ENST00000477935 FAPQ12884 760 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms