RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 PBX3P40426 434 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 ALDH7A1P49419 539 aaKnown RBP12.72□□□□□ -0.37
LSM2-212ENST00000477182 AMPD3Q01432 767 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 RAD51AP2Q09MP3 1159 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 CUL4BQ13620 913 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 POSTNQ15063 836 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 ARSHQ5FYA8 562 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 ZNF484Q5JVG2 852 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 RINT1Q6NUQ1 792 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 C15orf39Q6ZRI6 1047 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 C1orf186Q6ZWK4 172 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 DYMQ7RTS9 669 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 SLC22A17Q8WUG5 538 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 ATRIPQ8WXE1 791 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 ERCC4Q92889 916 aaPredicted RBP12.72□□□□□ -0.37
LSM2-212ENST00000477182 TMEM169Q96HH4 297 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 CCDC34Q96HJ3 373 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 CEP89Q96ST8 783 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 FBXO4Q9UKT5 387 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 KRT18P05783 430 aaKnown RBP12.71□□□□□ -0.37
LSM2-212ENST00000477182 POLGP54098 1239 aaPredicted RBP12.71□□□□□ -0.37
LSM2-212ENST00000477182 ASIC1P78348 528 aa12.71□□□□□ -0.37
LSM2-212ENST00000477182 CACNB1Q02641 598 aaPredicted RBP12.71□□□□□ -0.37
LSM2-212ENST00000477182 CCDC183Q5T5S1 534 aa12.71□□□□□ -0.37
LSM2-212ENST00000477182 MTHFD1LQ6UB35 978 aa12.71□□□□□ -0.37
LSM2-212ENST00000477182 MAEAQ7L5Y9 396 aa12.71□□□□□ -0.37
LSM2-212ENST00000477182 VPS52Q8N1B4 723 aa12.71□□□□□ -0.37
LSM2-212ENST00000477182 SLC44A3Q8N4M1 653 aa12.71□□□□□ -0.37
LSM2-212ENST00000477182 DDX12PQ92771 950 aa12.71□□□□□ -0.37
LSM2-212ENST00000477182 SYAP1Q96A49 352 aaPredicted RBP12.71□□□□□ -0.37
LSM2-212ENST00000477182 SHDQ96IW2 340 aa12.71□□□□□ -0.37
LSM2-212ENST00000477182 C7orf25Q9BPX7 421 aa12.71□□□□□ -0.37
LSM2-212ENST00000477182 TRIM9Q9C026 710 aa12.71□□□□□ -0.37
LSM2-212ENST00000477182 LRRC27Q9C0I9 530 aa12.71□□□□□ -0.37
LSM2-212ENST00000477182 ZBP1Q9H171 429 aa12.71□□□□□ -0.37
LSM2-212ENST00000477182 POLD4Q9HCU8 107 aa12.71□□□□□ -0.37
LSM2-212ENST00000477182 ARHGEF3Q9NR81 526 aa12.71□□□□□ -0.37
LSM2-212ENST00000477182 HOOK1Q9UJC3 728 aaKnown RBP12.71□□□□□ -0.37
LSM2-212ENST00000477182 USP18Q9UMW8 372 aa12.71□□□□□ -0.37
LSM2-212ENST00000477182 C2orf16Q68DN1 1984 aa12.7□□□□□ -0.38
LSM2-212ENST00000477182 MIA3Q5JRA6 1907 aa12.7□□□□□ -0.38
LSM2-212ENST00000477182 LAMTOR5O43504 91 aa12.7□□□□□ -0.38
LSM2-212ENST00000477182 DGAT1O75907 488 aa12.7□□□□□ -0.38
LSM2-212ENST00000477182 C22orf31O95567 290 aa12.7□□□□□ -0.38
LSM2-212ENST00000477182 CTSAP10619 480 aa12.7□□□□□ -0.38
LSM2-212ENST00000477182 KLRC1P26715 233 aa12.7□□□□□ -0.38
LSM2-212ENST00000477182 RFC5P40937 340 aa12.7□□□□□ -0.38
LSM2-212ENST00000477182 DPYDQ12882 1025 aa12.7□□□□□ -0.38
LSM2-212ENST00000477182 EMC2Q15006 297 aa12.7□□□□□ -0.38
LSM2-212ENST00000477182 PPM1JQ5JR12 505 aa12.7□□□□□ -0.38
LSM2-212ENST00000477182 ELOA2Q8IYF1 753 aaPredicted RBP12.7□□□□□ -0.38
LSM2-212ENST00000477182 PJA1Q8NG27 643 aa12.7□□□□□ -0.38
LSM2-212ENST00000477182 TMEM40Q8WWA1 233 aa12.7□□□□□ -0.38
LSM2-212ENST00000477182 DNAJC19Q96DA6 116 aa12.7□□□□□ -0.38
LSM2-212ENST00000477182 REEP2Q9BRK0 252 aa12.7□□□□□ -0.38
LSM2-212ENST00000477182 MRPL9Q9BYD2 267 aaKnown RBP12.7□□□□□ -0.38
LSM2-212ENST00000477182 DHX33Q9H6R0 707 aaKnown RBP12.7□□□□□ -0.38
LSM2-212ENST00000477182 XPNPEP1Q9NQW7 623 aa12.7□□□□□ -0.38
LSM2-212ENST00000477182 KCND2Q9NZV8 630 aa12.7□□□□□ -0.38
LSM2-212ENST00000477182 SMG5Q9UPR3 1016 aaKnown RBP12.7□□□□□ -0.38
LSM2-212ENST00000477182 PPME1Q9Y570 386 aa12.7□□□□□ -0.38
LSM2-212ENST00000477182 TBC1D4O60343 1298 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 HIP1RO75146 1068 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 MAFO75444 373 aaPredicted RBP12.69□□□□□ -0.38
LSM2-212ENST00000477182 IDEP14735 1019 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 ZSCAN20P17040 1043 aaPredicted RBP12.69□□□□□ -0.38
LSM2-212ENST00000477182 GUCY2CP25092 1073 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 GBP2P32456 591 aaPredicted RBP12.69□□□□□ -0.38
LSM2-212ENST00000477182 CRYBB1P53674 252 aaPredicted RBP12.69□□□□□ -0.38
LSM2-212ENST00000477182 DSC3Q14574 896 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 PTPN14Q15678 1187 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 CNNM4Q6P4Q7 775 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 DCLRE1AQ6PJP8 1040 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 CYP26C1Q6V0L0 522 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 MAML2Q8IZL2 1156 aaPredicted RBP12.69□□□□□ -0.38
LSM2-212ENST00000477182 LRRC71Q8N4P6 559 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 MCPH1Q8NEM0 835 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 GPR152Q8TDT2 470 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 RSAD2Q8WXG1 361 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 SLC7A3Q8WY07 619 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 RSPH1Q8WYR4 309 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 SMARCE1Q969G3 411 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 BCO2Q9BYV7 579 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 EPC1Q9H2F5 836 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 ZHX3Q9H4I2 956 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 CDHR5Q9HBB8 845 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 GPRC5CQ9NQ84 441 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 RNF19AQ9NV58 838 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 EPS15L1Q9UBC2 864 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 GMEB2Q9UKD1 530 aa12.69□□□□□ -0.38
LSM2-212ENST00000477182 RALYQ9UKM9 306 aaKnown RBP12.69□□□□□ -0.38
LSM2-212ENST00000477182 IGKV6-21A0A0C4DH24 114 aa12.68□□□□□ -0.38
LSM2-212ENST00000477182 SFI1A8K8P3 1242 aa12.68□□□□□ -0.38
LSM2-212ENST00000477182 MAGEB2O15479 319 aa12.68□□□□□ -0.38
LSM2-212ENST00000477182 KLRC4O43908 158 aa12.68□□□□□ -0.38
LSM2-212ENST00000477182 TBCAO75347 108 aaKnown RBP12.68□□□□□ -0.38
LSM2-212ENST00000477182 FAM13AO94988 1023 aa12.68□□□□□ -0.38
LSM2-212ENST00000477182 SMC2O95347 1197 aa12.68□□□□□ -0.38
LSM2-212ENST00000477182 RPN1P04843 607 aaKnown RBP12.68□□□□□ -0.38
LSM2-212ENST00000477182 MYL1P05976 194 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms