RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 TRIM9Q9C026 710 aa14.68□□□□□ -0.06
ACTN4-205ENST00000477174 CXCL16Q9H2A7 254 aa14.68□□□□□ -0.06
ACTN4-205ENST00000477174 PLEKHA5Q9HAU0 1116 aa14.68□□□□□ -0.06
ACTN4-205ENST00000477174 SLC38A7Q9NVC3 462 aa14.68□□□□□ -0.06
ACTN4-205ENST00000477174 MARCH5Q9NX47 278 aa14.68□□□□□ -0.06
ACTN4-205ENST00000477174 SSX2IPQ9Y2D8 614 aa14.68□□□□□ -0.06
ACTN4-205ENST00000477174 TTC28Q96AY4 2481 aa14.68□□□□□ -0.06
ACTN4-205ENST00000477174 H3BQ06 376 aaPredicted RBP14.67□□□□□ -0.06
ACTN4-205ENST00000477174 TADA2AO75478 443 aa14.67□□□□□ -0.06
ACTN4-205ENST00000477174 PPP1R37O75864 691 aa14.67□□□□□ -0.06
ACTN4-205ENST00000477174 SLFN14P0C7P3 912 aa14.67□□□□□ -0.06
ACTN4-205ENST00000477174 SRGAP2BP0DMP2 458 aa14.67□□□□□ -0.06
ACTN4-205ENST00000477174 HARSP12081 509 aaKnown RBP14.67□□□□□ -0.06
ACTN4-205ENST00000477174 KCNQ1P51787 676 aa14.67□□□□□ -0.06
ACTN4-205ENST00000477174 KCNC3Q14003 757 aa14.67□□□□□ -0.06
ACTN4-205ENST00000477174 HSP90AA2PQ14568 343 aaPredicted RBP14.67□□□□□ -0.06
ACTN4-205ENST00000477174 POSTNQ15063 836 aa14.67□□□□□ -0.06
ACTN4-205ENST00000477174 DCLRE1AQ6PJP8 1040 aa14.67□□□□□ -0.06
ACTN4-205ENST00000477174 GPR65Q8IYL9 337 aa14.67□□□□□ -0.06
ACTN4-205ENST00000477174 RNF168Q8IYW5 571 aaPredicted RBP14.67□□□□□ -0.06
ACTN4-205ENST00000477174 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.67□□□□□ -0.06
ACTN4-205ENST00000477174 STAMQ92783 540 aa14.67□□□□□ -0.06
ACTN4-205ENST00000477174 DDX27Q96GQ7 796 aaKnown RBP14.67□□□□□ -0.06
ACTN4-205ENST00000477174 SNX27Q96L92 541 aa14.67□□□□□ -0.06
ACTN4-205ENST00000477174 UROC1Q96N76 676 aa14.67□□□□□ -0.06
ACTN4-205ENST00000477174 TSPAN18Q96SJ8 248 aa14.67□□□□□ -0.06
ACTN4-205ENST00000477174 MRPL17Q9NRX2 175 aaKnown RBP14.67□□□□□ -0.06
ACTN4-205ENST00000477174 CNTN3Q9P232 1028 aa14.67□□□□□ -0.06
ACTN4-205ENST00000477174 USP25Q9UHP3 1055 aa14.67□□□□□ -0.06
ACTN4-205ENST00000477174 ADAM28Q9UKQ2 775 aa14.67□□□□□ -0.06
ACTN4-205ENST00000477174 EXOC7Q9UPT5 735 aa14.67□□□□□ -0.06
ACTN4-205ENST00000477174 FAM50BQ9Y247 325 aa14.67□□□□□ -0.06
ACTN4-205ENST00000477174 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.67□□□□□ -0.06
ACTN4-205ENST00000477174 STYXL1Q9Y6J8 313 aa14.67□□□□□ -0.06
ACTN4-205ENST00000477174 KIAA1671Q9BY89 1806 aa14.66□□□□□ -0.06
ACTN4-205ENST00000477174 OGTO15294 1046 aa14.66□□□□□ -0.06
ACTN4-205ENST00000477174 LINC01565O15544 149 aa14.66□□□□□ -0.06
ACTN4-205ENST00000477174 LILRB3O75022 631 aa14.66□□□□□ -0.06
ACTN4-205ENST00000477174 NDUFV1P49821 464 aa14.66□□□□□ -0.06
ACTN4-205ENST00000477174 DLX2Q07687 328 aaPredicted RBP14.66□□□□□ -0.06
ACTN4-205ENST00000477174 PTPN14Q15678 1187 aa14.66□□□□□ -0.06
ACTN4-205ENST00000477174 SLC10A6Q3KNW5 377 aa14.66□□□□□ -0.06
ACTN4-205ENST00000477174 L1TD1Q5T7N2 865 aaKnown RBP14.66□□□□□ -0.06
ACTN4-205ENST00000477174 KIAA1841Q6NSI8 718 aa14.66□□□□□ -0.06
ACTN4-205ENST00000477174 STXBP4Q6ZWJ1 553 aa14.66□□□□□ -0.06
ACTN4-205ENST00000477174 CEP57L1Q8IYX8 460 aa14.66□□□□□ -0.06
ACTN4-205ENST00000477174 CHAMP1Q96JM3 812 aa14.66□□□□□ -0.06
ACTN4-205ENST00000477174 ACCSQ96QU6 501 aa14.66□□□□□ -0.06
ACTN4-205ENST00000477174 MSTO1Q9BUK6 570 aa14.66□□□□□ -0.06
ACTN4-205ENST00000477174 COL25A1Q9BXS0 654 aaPredicted RBP14.66□□□□□ -0.06
ACTN4-205ENST00000477174 EMILIN2Q9BXX0 1053 aa14.66□□□□□ -0.06
ACTN4-205ENST00000477174 HAPLN2Q9GZV7 340 aa14.66□□□□□ -0.06
ACTN4-205ENST00000477174 CHST7Q9NS84 486 aa14.66□□□□□ -0.06
ACTN4-205ENST00000477174 TBC1D7Q9P0N9 293 aa14.66□□□□□ -0.06
ACTN4-205ENST00000477174 CLEC1BQ9P126 229 aa14.66□□□□□ -0.06
ACTN4-205ENST00000477174 CUL9Q8IWT3 2517 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 FAM237AA0A1B0GTK4 181 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.65□□□□□ -0.06
ACTN4-205ENST00000477174 A0A1W2PQ27 194 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 A0A1W2PQ64 194 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 A0A1W2PQD8 194 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 GRXCR2A6NFK2 248 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 CASTOR2A6NHX0 329 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 DLL1O00548 723 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 FAM189A1O60320 539 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 CLASP2O75122 1294 aaKnown RBP14.65□□□□□ -0.06
ACTN4-205ENST00000477174 TBX10O75333 385 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 GCNT3O95395 438 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 ADRB2P07550 413 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 RPL9P32969 192 aaKnown RBP14.65□□□□□ -0.06
ACTN4-205ENST00000477174 GLUD2P49448 558 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 ASIC1P78348 528 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 POU5F1Q01860 360 aaKnown RBP14.65□□□□□ -0.06
ACTN4-205ENST00000477174 ELAVL2Q12926 359 aaKnown RBP14.65□□□□□ -0.06
ACTN4-205ENST00000477174 COASYQ13057 564 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 UPP1Q16831 310 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 USP41Q3LFD5 358 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 SEZ6Q53EL9 994 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 GLRA4Q5JXX5 417 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 KIAA0319Q5VV43 1072 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 PTCRAQ6ISU1 281 aaPredicted RBP14.65□□□□□ -0.06
ACTN4-205ENST00000477174 FUT10Q6P4F1 479 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 SLC39A4Q6P5W5 647 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 TAS1R1Q7RTX1 841 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 PPFIBP1Q86W92 1011 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 CD302Q8IX05 232 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 ADAMTS19Q8TE59 1207 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 AUTS2Q8WXX7 1259 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 RABGGTAQ92696 567 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 MSLNLQ96KJ4 702 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 ZMAT2Q96NC0 199 aaKnown RBP14.65□□□□□ -0.06
ACTN4-205ENST00000477174 PAAF1Q9BRP4 392 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 HERC2P3Q9BVR0 1158 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 GPR62Q9BZJ7 368 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 TMEM206Q9H813 350 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 CD207Q9UJ71 328 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 HPSEQ9Y251 543 aa14.65□□□□□ -0.06
ACTN4-205ENST00000477174 SF3B1O75533 1304 aaKnown RBP eCLIP14.65□□□□□ -0.063e-6■■■■□ 23.1
ACTN4-205ENST00000477174 A0A1B0GVL5 298 aa14.64□□□□□ -0.07
ACTN4-205ENST00000477174 PVALEFA0A1B0GWK0 134 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms